Grus americana (Whooping crane): 129206167
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Entry
129206167 CDS
T11359
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
game Grus americana (Whooping crane)
Pathway
game04140
Autophagy - animal
game04148
Efferocytosis
game05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
game00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129206167 (VPS16)
04148 Efferocytosis
129206167 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129206167 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
game04131
]
129206167 (VPS16)
Membrane trafficking [BR:
game04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
129206167 (VPS16)
Hops complex
129206167 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
129206167
NCBI-ProteinID:
XP_054680932
LinkDB
All DBs
Position
4:complement(436801..445926)
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AA seq
838 aa
AA seq
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MDCYTANWNPLGEEAFYRKFELYTMEWNLREDLRDCLVAAAPYGGPIALLKNNARKEKSP
SARPTLEIYSASGLLLASIPWKSGQLVQLGWTASEDLLCIQEDGTVLIYNLFCEFKRHFS
MGNEVLQNHVLEAKVFHTEYGTGVAILTGAHRFSLATNIDDLKLRRMPEVPGLQKPPSCW
AVLSQDRVTIILLAVGQDLYLLDNTSCSVVTPPGMSPSAGAYLQMAVSFNYRCLALFTDT
GYIWMGLATLKEKLCEFNSSVRSPPKQMVWCMRPRSRQRAVVVAWDRQLMVAGNSTECIQ
FVLDEDSYLVPELDGVRILSRTSHEFLHEIPEASQEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIKDQKLLPEAVSQCIEAASYEHEPDTQKSLLRAASFGKCFIDKFPPESFVR
MCQDLRVLNAIRDYQIGIPLTFTQYKRLTIEVLLDRLVLRRLYPLAIRICEYLRLSEIQG
VSRILAHWACYKVQQKDKSDEEVAHAINQKLGDTPGISYSEIAARAYDCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVYTVVLHLKNELNRGTFFMTLQNQPVA
LSLYRQFCKHQERETLKDLYNQDDNHQELGNFHVHSSYSEKRIEGRVGALQNALDEYYKA
KNEFAAKATEDQIKLLRLQRHLQEDLDKPYLDLSLHDTVSNLILDGHHKRAEQLYREFKI
PDKRYWWLKISALANRGDWEEMEKFSKSKKSPIGYLPFVEISVKHHNRYEAKKYAPRVTP
EQRVKAFVLVGDLDQAADAAIEHKNETEMNFVLSKCTASTDAAVAEKLNRARAQLLKK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggactgttacacggccaactggaacccgctgggcgaggaggccttctaccggaagttc
gagctgtacaccatggagtggaacctgagggaggacctgcgggactgcctggtggcagcc
gccccgtacggggggcccatagctctgctgaagaacaacgcccggaaggagaaatccccc
agcgcccgtcccacgctggagatctactcggcctcggggcttctcctggccagcatcccg
tggaagagcggccagctggtgcagctgggctggacggccagcgaggacctgctctgcatc
caggaggacggcaccgttctcatctacaacctcttctgcgagttcaagcgccacttcagc
atgggcaacgaggtgctgcagaaccacgtgttggaggcgaaggtcttccacacggagtac
ggcaccggcgtggccatcctcaccggcgcgcaccgcttctccctggccaccaacatcgac
gacctgaagctgcgcaggatgcccgaggttcccggtctgcagaagccgccatcctgctgg
gccgtgctgtcccaggacagagtcaccatcatcctgctggcagtcggacaggacctctac
ctcctggacaacacctcctgctccgtggtgaccccccctggcatgagcccctccgccggc
gcctacctgcagatggccgtgtccttcaactaccgctgcctggcactcttcaccgacacc
ggctacatctggatggggctggccacgctgaaggagaagctctgcgagttcaacagcagc
gtccgctctccgcccaagcagatggtttggtgcatgcgtccccggagccggcagcgtgcc
gtggtggtggcctgggaccggcagctgatggtggcggggaactccacggagtgcatccag
tttgtcctggatgaggactcctacctggtgccggagctggacggggtccggatcttgtct
cgcacatcccacgagttcctgcacgagatcccagaggccagccaggagatcttcaagatc
gcctccatggccccgggggctctcctgctggaggcgcagaaggagtacgagaaggagagc
cagaaggcagacgagtacctgcgggagatcaaggaccagaagctgctcccggaggcggtg
agccagtgcatcgaggcagccagctacgagcacgagccggacacccagaagtcgctgctg
agggcagcctccttcgggaagtgcttcatcgacaagttccccccagagagtttcgtgcgc
atgtgccaggacctgcgggtgctcaatgccatccgggactaccagatcggcatccccctc
accttcacccaatacaagcgtctcaccatcgaggtcctgctggacaggctggtcttgcgg
cggctctacccgctggccatcaggatctgcgagtacctgcgcctctcggagatccagggc
gtcagccgcatcctggcccactgggcctgctacaaggtgcagcagaaggacaagtccgat
gaggaggtggcccacgccatcaaccagaagctgggtgacacgccgggcatctcctactcg
gagatcgctgcccgggcttacgactgcggcaggacggagctggccatcaagctgctggag
tacgagccgcgctctggggagcaggtcccgctgctgctgaagatgaagcggagcaagctg
gccctcagcaaagccatcgagagcggggacaccgacctggtctacactgtcgtgctccac
ctgaagaacgagctgaatcgcggcaccttcttcatgacgctgcaaaaccagccggtggcc
ctgagcctgtaccgccagttctgcaagcaccaggagcgggagacgctgaaggacctgtac
aaccaggacgacaatcaccaggagctcggcaacttccacgtccactccagctactcggag
aagcgcatcgaagggcgagtcggagctctccagaacgccctggacgagtactacaaagcc
aaaaacgagtttgctgccaaggccacagaggatcagatcaagctgctgcggctccagcgg
cacctccaggaggacttggacaagccctatctcgacctctcgctgcacgacaccgtctcc
aacctcatcctggacggccaccacaagcgagccgagcagctctaccgcgagttcaagatc
cccgacaagaggtactggtggctgaagatcagcgccctggccaaccgcggcgactgggag
gagatggagaagttctccaagagcaagaagtcgcccatcgggtacctgcccttcgtggag
atctcggtgaagcaccacaaccgctacgaagccaagaagtacgcgccgcgcgtcacccct
gagcagcgtgtcaaggccttcgtcctggtgggggacctggaccaagcggccgacgccgcc
atcgagcacaagaacgagacggagatgaacttcgtcctgtccaagtgcacggccagcacc
gacgccgcggtggccgagaagctgaaccgggcccgagcccagctcctgaagaagtga
DBGET
integrated database retrieval system
