Grus americana (Whooping crane): 129206724
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Entry
129206724 CDS
T11359
Symbol
UBR1
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1 isoform X1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
game Grus americana (Whooping crane)
Brite
KEGG Orthology (KO) [BR:
game00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
game04121
]
129206724 (UBR1)
Enzymes [BR:
game01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129206724 (UBR1)
Ubiquitin system [BR:
game04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
129206724 (UBR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
WHD_UBR1
zf-UBR
ClpS
Motif
Other DBs
NCBI-GeneID:
129206724
NCBI-ProteinID:
XP_054682439
LinkDB
All DBs
Position
5:complement(30644307..30716591)
Genome browser
AA seq
1763 aa
AA seq
DB search
MADGADEGPGAGAAGAAGGRVSVQPEERAMWCDERFNFQTTFLQCLAKHVPNIYSAEMDP
LLEKQEEMVQAAILYPLECYLFGEDPDIFLEKLQQSGTSQLCGKVFKGGETTYSCRDCAV
DPTCVLCMDCFQNSIHKNHRYKMHSSTGGGFCDCGDTEAWKAGPLCTKHEPGASGSAKEN
SECQLNEEIMEHSRRVFPSVIKYIVDMLIWEEEKELPPELTISREKVDSYYCVLFNDEHH
SYDHVIYSLQRALGCELGEAQLHTTAIDKEGRRAVKAGHYASCQEAKEEIKRHSENVSQR
ALHVEVLHADVMAHQKFALRLGSWLNKLMSYSSDFRQIFCQICLKEEAGSEKPCFISKLM
LWDAKLHKGARKVLHELIFSSFFMEMQYKKLFAVEFVKYYKALQKEYISDDHDRVLSVTA
LSVQMFTVPTLARHLIEEQNVITTITETLLEVLPEYLDKNDKFNFQGYSQDKLNRVYAVI
YDLRYVLVSKPTLWTDRLREQFLEGFVSFLRILTCMQGMEEIKRQIGQHIEVDPDWEAAI
AIQMQLKNILLMFQEWCACDEELLLKAYRECHKAVMRCSTNGRSREKTVFHLCGHTLESR
PYRVSADPVSIHLPLSRTLAGLHVRLSKTGTISRLHEFVSPEEFQVELLVEYPLRCLVLV
AQVAAEMWRRNGLSLISQVFYYQDVKCREEMYDKDIIMLQIGASLMDPNQFLLLILQRYE
LADAFKKIKPTKDQDLIKQCNVLIEEMLQILIYVVGERYVPGVSNVTKEDVIMREIIHLL
CIEPMAHSAITKSLPENENNETGLENVIDKVATFKKPGVSGHGVYELKDECLKEFNMFFY
HYTKTQHSKAEHTQKKRRKQENRDEALLPPPPPDFSPAFSNVVRILNCDVMMHILRTILQ
RAVELETHLWTEAMIQMVLHLLSLGLLEEKQQLQKSPEEEVTFDFYHKATRMGSSALNAV
NVLMLLEKLKRVPQLEAQKDTVNWILQMFDTVKRLREKSSLTTVAATSGSEATKGDETQT
SQDKEKAERKRKAEAARLHRQKIMAQMSALQRNFIETHKLLYENTLEAQGKGDAIMEEES
MSLAIDYSKIALGPKRGPSVAEKEVLTCILCQEEQEVKLESAAMVLSACVQKSTALTQNR
RRILELSGDTLDPLFMHPDLPCGTHTGSCGHVMHAACWQKYFEAMQLNFQQRLHVEQIFD
LENGEYLCPLCKSLCNTVIPIVPLQAQKINSEDAEAVAQILSLARWLEIITVRISGYSVK
NVKGEKQNLPAFANKEMGNSALEFHSILSFGVQPSVKYSSSIKEMLILFATTIYRVGLKV
APNEADYRIPMMTWSTCAFTIQCIENLLETEGKPLFGSLQNRQHSGLKALVQFAAAQRTT
SPQVLIQKHLIRLLGVLLPNFKAEDTPSLLDVDMFHILVGVVLSFSSLYWDDAVDLQPSS
TSSAYNHLYLFHLTTLAHITQIVISSATDRESPTAQSYDNSEEACSAQSFCREVCQYTSG
CFSQDIPGWLVWDCVKKGIMPYLRCAALFFHYLLGVSPPEELLQVSEEGQFKALCSYLSL
PTNLFLLFQEYWDTVNPLLQRWCADPVVLSCLKGKSIAIRYPRKRNSLIELPEDYSCLLN
QASQFRCPRSSDDEQKHPVLCLFCGAMLCSQNTCCQELVNGEELGACTSHALQCGAGVCM
FLKIRECKVVLIEGKTRGCLYPAPYLDEYGETDPGLKRGNPLHLCQERYRKLHLLWQQHC
IIEQIARSQETNQIFFGFNWQLL
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggagccgatgaagggcctggagcgggagcggcgggagcagcgggcggccgg
gtctccgtgcagcccgaggagcgagccatgtggtgtgatgaaagattcaacttccaaact
acgtttttgcagtgcttggcaaaacacgtgccaaatatttactcagctgaaatggacccc
ttgctggagaaacaggaagaaatggtccaggcagcaatattataccccctggaatgttat
ttgtttggggaagaccccgatatattcctggagaagctacaacagagtggaacctcccag
ctctgtgggaaggtgttcaaaggaggggagacaacatactcttgcagagactgtgcagtt
gatccaacttgtgtactttgtatggactgcttccagaatagcattcacaagaaccaccgg
tacaagatgcatagctccactgggggtggattttgtgactgtggggatacagaggcatgg
aaggctggaccactgtgtactaaacatgagcctggagcctcgggttctgcaaaagaaaat
tctgaatgtcagttgaatgaagaaattatggagcactctaggagggtatttccctctgtg
ataaaatacattgtagatatgcttatatgggaagaagagaaggagctgccaccagagctc
acaattagcagagagaaggtagacagctactactgtgtccttttcaatgatgaacatcat
tcttatgatcatgtcatctatagcctgcaaagggcacttggctgcgaacttggtgaagcc
cagttgcatactactgccatagataaagagggtcgtagagctgttaaggcaggacattat
gcttcttgtcaggaagcaaaagaagaaatcaagaggcattctgaaaatgtttctcaacga
gcacttcatgtggaggttctgcatgctgatgttatggctcaccagaagtttgccctgcgc
cttggttcttggctgaacaaactcatgagctattcaagtgactttcgccagatcttctgt
caaatatgtctcaaagaagaagctggatctgaaaagccatgcttcataagcaagttgatg
ctatgggatgcaaaacttcataaaggggcaaggaaggttcttcatgaacttatcttcagt
agtttttttatggaaatgcaatacaaaaaactttttgctgtggaatttgtgaagtattac
aaggcattgcaaaaagaatacatcagtgatgatcatgacagagttctctctgtgacagca
ctctcagttcagatgttcaccgtacctactctggcccgacatcttattgaagagcaaaat
gtaatcaccaccattacagagacactcctagaagtgcttccagagtacctagacaaaaat
gacaagttcaacttccaaggttacagtcaggacaaactgaaccgggtatatgcagtaata
tatgacctcaggtatgtattagtcagcaagcctacgttatggacagaccgtctgagggag
cagtttttagaaggatttgtttctttcctaaggattctaacttgcatgcagggaatggag
gagataaaaagacagattggtcagcacattgaggtggaccctgactgggaagcagctatt
gctatacagatgcagctcaagaacattcttctgatgttccaggagtggtgcgcctgtgac
gaagagctgttgctcaaggcatacagggaatgtcataaagctgtgatgaggtgcagcaca
aatggccgctcacgggaaaagacagtgtttcacttgtgcggccatactctggagagcaga
ccttacagagtgtctgcagatcctgtcagcatacatttaccactgtctaggactcttgca
ggtcttcatgtacgattaagcaagactggaaccatctcaagattgcacgagtttgtttct
cctgaagaatttcaagtggagctgctagtagaatatccattgcgatgtcttgtcttggtt
gctcaggttgctgcagagatgtggaggaggaatgggctctccctgataagccaggtattc
tattatcaagatgttaaatgcagagaagagatgtatgacaaagacatcatcatgctccag
ataggtgcatctcttatggatccaaaccagttcctcctactgatactgcagagatacgag
cttgctgatgctttcaaaaagatcaagcccaccaaagatcaggatttgatcaaacaatgt
aacgtgctcatagaagagatgctacagattctcatctatgttgtgggggaaaggtatgtg
cctggagtgagtaatgtgacaaaagaagatgttatcatgagagaaattatccatctgtta
tgtattgaaccaatggctcacagtgcaattaccaagtccttgcctgaaaatgagaacaat
gaaactggcttggagaatgtaattgataaagtggctacatttaagaaaccgggtgtgtct
ggccatggagtttatgaactgaaagatgagtgcttgaaggagttcaatatgttcttttat
cattacactaagacccagcacagcaaggctgaacatacacaaaagaaaagaagaaaacaa
gaaaacagagatgaagcattgttgccgccacctcctccagacttcagtcctgcattcagc
aacgtggtgaggattctgaactgtgacgttatgatgcacatactgcggaccattcttcag
agagcagtagaactggaaacccacttgtggactgaagctatgatccaaatggtgcttcat
ctcctttctttagggttactagaagagaagcagcagttacagaagtctccagaagaagaa
gtaacctttgatttttatcacaaagcaacacgaatgggaagctcggccttgaatgctgtg
aatgtgctaatgcttctggaaaaattaaagagagttcctcagttagaggcacagaaggac
acagtcaattggatactgcagatgtttgacacagtgaaaagattgagagaaaaatctagt
ttgacaacagtagcagctacatcaggctcagaagctacaaaaggtgatgagacacagacc
tctcaggataaagagaaagctgagcggaagagaaaggcagaagcagctaggttgcaccgt
cagaagataatggcccagatgtctgcactgcagaggaatttcattgaaacccataagctc
ctgtatgaaaacacactggaagcacaggggaaaggagatgctattatggaggaagaaagc
atgtctttggctattgattactctaaaatcgctttgggtcccaaacgaggtccatctgtt
gctgagaaagaagttctgacctgtattctttgccaggaggagcaggaagtaaagttggaa
agtgctgccatggtattatctgcctgtgtccagaaatcaactgccttaactcagaatagg
cgcagaattcttgaactctcaggggatacactagatcctcttttcatgcaccctgaccta
ccttgtgggacccacacaggaagctgtggacatgtgatgcatgcagcctgctggcagaag
tactttgaagccatgcagctgaactttcaacaacgtctgcatgttgaacagatatttgac
ttggagaacggagagtatctttgtccactttgcaaatctctgtgcaatactgtgattcct
attgttccattgcaggctcaaaaaataaacagtgaggatgcagaggcagtagctcaaatt
ctgtcgctggctaggtggctggagattatcacagtcaggatatcgggctacagtgtgaaa
aatgttaaaggagagaaacaaaatcttccagctttcgccaacaaggaaatggggaactct
gctttggaattccattccatccttagttttggagttcagccctcagtcaaatactcaagc
agtatcaaggagatgcttattctctttgccaccaccatttatagagttggattaaaagtt
gctccaaatgaagctgattacaggattcctatgatgacctggagcacctgtgcttttacc
atccagtgtatagaaaacctcttggaaacagagggcaagcctttatttggatctctccaa
aatagacagcacagtggccttaaagcattagtgcagtttgcagctgctcagagaacaaca
tcaccacaggtcctgattcagaaacatctgattcgtcttctaggagttcttctaccaaac
ttcaaagcggaggacactccatccctcttagatgtagatatgttccacattttggtggga
gttgtgttatcattttcatctttatactgggacgatgctgtagacttgcaaccttcatca
actagttcagcctataaccacctctacctcttccatctgacaacattggcacacataaca
caaattgtcatctcttcagcaacagatagagaatcccctactgctcaatcatatgacaac
agtgaggaggcatgctctgcacagtctttctgcagagaggtttgccagtacaccagcggt
tgctttagtcaggatattccaggctggcttgtgtgggattgcgttaaaaaaggcatcatg
ccttaccttcgttgtgctgctttattttttcattatttgctgggagtttctccacctgag
gagctactacaagtttctgaagaaggacaattcaaggcactttgtagttatctctctcta
cctaccaatttgttcttgctcttccaggagtattgggacacagtaaatccattgcttcaa
agatggtgtgctgaccctgtggtgttaagttgtttaaaggggaaaagcattgcaataagg
taccctaggaaaagaaatagtttaatagagcttcctgaagactatagctgccttctgaac
caagcctctcaatttagatgcccgcggtcttctgatgatgaacaaaaacatccagtattg
tgtttattctgtggggctatgttgtgttcccagaatacttgctgtcaggagctggtgaat
ggggaggagctgggagcctgtacttctcatgctcttcaatgtggagctggagtctgtatg
tttctcaaaatcagggaatgcaaagttgtcctcattgaaggtaaaaccaggggctgctta
tatcctgctccctacttggatgaatatggagaaacagatccaggtctgaaaagaggcaat
cccctgcatttatgtcaggagcgttaccggaagctccatctgctatggcagcaacactgc
atcatagagcagattgccaggagccaagaaacgaatcagatcttctttggattcaactgg
caactgctctga
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integrated database retrieval system
