Grus americana (Whooping crane): 129207119
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Entry
129207119 CDS
T11359
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
game Grus americana (Whooping crane)
Pathway
game03022
Basal transcription factors
game03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
game00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129207119 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
129207119 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
game03021
]
129207119 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
game03400
]
129207119 (GTF2H1)
Transcription machinery [BR:
game03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
129207119 (GTF2H1)
DNA repair and recombination proteins [BR:
game03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
129207119 (GTF2H1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
129207119
NCBI-ProteinID:
XP_054683556
UniProt:
A0A850TV39
LinkDB
All DBs
Position
5:16437519..16461737
Genome browser
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSLNAGDNSAVPSKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEREFWTRFFQSHYFHRDRLNTGSKD
LFAECAKLDEKGLKTMVSQGVKNPLIDLTALEDKTLDEGYGVASVASTSNASKSARESSN
AAIIKRFNHHSAMVLAAGLRKQEAQNDHYSETSSTDGNSRDSDFFQPPMKKVKLQESIEY
EDLAKNNSIKTIALNLKKSDRYYHGPTPIQSQQYATSQDIINSFHSIRQEMEAYVPKLTQ
VLSSGDATSTIAVLSPGGALMQGGTQQAINQMVPNDIQCELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMRSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKFHTWQ
SRRMLKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgtcatctgaagaagtgttactgatagtaaagaaggtacgtcagaagaagcag
gatggagctctctaccttatggctgaaaggatagcatgggcacctgaaggcaaagaccga
ttcacagtcagccatatgtatgcagacataaaatgccagaaaatcagtccagaaggtaaa
gctaaaattcagcttcagctagtattgcatgcaggggacacaaccaactttcacttctcc
aatgaaagcacagcagtgaaggagcgagatgcggtcaaggatcttcttcaacaactgttg
cccaagttcaaaaggaaagctaataaagaacttgaggagaagaacagaatgctgcaagaa
gatcctgttttgtttcagctctataaagaccttgttgtgagccaagtaatcagtgctgaa
gaattctgggccaaccgtttaagcctgaatgcaggggataattctgcagtacctagtaag
caggacgtgggcatctctgcagcatttctggctgatgtacggcctcaaacagatggctgc
aatggtctgaggtataatttgacttcagatatcattgaatccatatttcgaacatatcct
gcagtaaaaatgaaatatgcagaaaatgttccacataacatgaccgagagggaattctgg
acacgattttttcagtctcattatttccatcgggacaggctcaatacaggctcaaaagac
ctctttgcagaatgtgccaaactggatgaaaaagggttaaaaacaatggtgtctcaagga
gtaaaaaaccctctgatagatttaacagctttggaagataaaacattagatgaaggctat
ggtgttgcttctgtggcctctacatcaaatgcctcaaaatctgctcgagaaagtagcaat
gctgccattataaaacgctttaatcatcatagtgccatggtccttgcagctggcctcagg
aaacaagaagcacaaaatgaccattacagtgagaccagcagtacggatggaaactccagg
gattcagatttctttcagccaccaatgaaaaaggtgaaactgcaggagtccattgaatat
gaagatttagcaaagaataatagcattaaaactattgcactaaacttaaagaagtctgat
aggtattatcatggtccaactccaattcaatcacagcaatatgcaaccagtcaggatata
attaattcttttcatagtattaggcaagaaatggaagcatatgtacccaaactaactcag
gttctttcaagtggtgatgctactagcactattgcagtcctgtcacctggaggagcactt
atgcagggtggaacacagcaagccataaaccagatggtgccaaatgacattcagtgtgaa
ctaaaacacttgtacgtggcagtaggggaactgctacgacacttctggtcctgctttcct
gttaacacgccattcctagaagaaaaggttgtgaaaatgaggagcaacttggaaagattt
caggttacaaagctctgcccattccaagaaaagattcggagacagtatttaagcacaaat
ttggtaagtcacatagaagagatgctgcagacggcctacaataagttccacacatggcag
tcccggcgtatgctgaagaagacgtga
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