Grus americana (Whooping crane): 129207517
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Entry
129207517 CDS
T11359
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
game Grus americana (Whooping crane)
Pathway
game04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
game00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
129207517 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
game04131
]
129207517 (SPATA13)
Membrane trafficking [BR:
game04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
129207517 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
PH_5
Motif
Other DBs
NCBI-GeneID:
129207517
NCBI-ProteinID:
XP_054684552
LinkDB
All DBs
Position
1:198096409..198261589
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AA seq
1352 aa
AA seq
DB search
MFRVTFNVVTEKVTFTLAACPSVTWKAVQPEELSSPSGCESKTNQGATDAGETARSAGGD
SNVTLSYPSLHLHAYSIESMTTFPNGCGNGTTVTCIVMDNKEPQNQTTCVSHNGGYSTSN
SHEEEIQEDKLSPSKIMRFFTTPRKRANSSSDRPRSLVLMGNSTTWNALSSIRKMGSFKK
LKSSVLQGIQTRECSDVLNENGVGKHGSNGAVVRVQTNRYSYSGPLHDFQNAVDGLASDC
SDAEESDESFLRNTHRSRSIRRAYGAGRINLLDADKVQSHHNCTRPTSPVIAEPKICEIL
VKDSENNRIIYRRSKSSDNLNFLKKSSFKRKSTSNLTDLKVANEKQMPTRSVSVTSADSD
KTGGNPERRSKRWKSPIRAKDFDRVLKLVSNVTDVAWKKDDPKTTAPSPTEQSQRTRSNS
RLHDDYSRRVSSSTDHDRKRCTSPVSTPDSSLPGTPCLQSPTVAQDKEAEMNVAVAEDKS
LRMSSGIPDSDSLSPTLNDISPFPNEVFYSDSDEPKATQQFTHEAENPHIPVRPTTPKPQ
SPTAEKVKCNMNFQCPNHHSTCSLSSSESEERAEVPGLKLGRNPVCFQDSVQTVYYDDGN
EDSGISSHSQLSLNLASGAEEKKEEVVSDDHWKRSPSQDEDKTDTQKVTPRRWGSGKRSR
PRPLSDYGQMSIRSFSIPEDAVAVESQRTDCTDGENQPGLASIGSVIQSNTVGYHRGRKR
RPISVIGGVNFYGSGPAEEIEGLLTQPVTRPPIPAHQVPPYKAVSARFRPLTFSQSTPIG
LDRVGRRRQMRTSNVAADGGTESSALVDDNGSEEDYSYEELCQATPRYLQPGGEQLAINE
LISDGSIVYAEALWDHVTMDDQELGFKAGDVIRVLEASNKDWWWGRNEDKEAWFPASFVR
LRVNQEEVPENCSSIQDEEQDADISKHRQKIAENKDQMRTNVIQEIMNTERVYIKHLKDI
CEGYIRQCRKHTGMFTPAQLSTIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFL
QHQEGFAIYSEYCNNHPSACIELSKLMKQGKYRHFFEACRLLQQMIDIAIDGFLLTPVQK
ICKYPLQLAELLKYTTQEHSDYNNIKAAYEAMKNVACLINERKRRLESIDKIARWQVSIV
DWEGPDVLARSSELIHSGELTKISKQGKSQQRTFFLFDHQLVFCKKDLLRRDILYYKDRI
DMDEMEIVDTEDGRDKDFNINVKNAFKIVNRATEEIHLFCAKKQEDKKRWMEACESERRR
VQEDKEMGMEISENQKKQAMQNARKSRHGKIKGVSYNGCPVPPPHQSLHPIHQRHITVPT
SIPQQQVFALAEPKRKPSLFWHTFNKLTPFKK
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtgtcaccttcaatgtagtgacagagaaagttaccttcaccttggcagcctgc
ccctccgtcacgtggaaggcagtgcagcctgaggagctcagctcacctagtggatgtgaa
agcaagacaaaccaaggtgcaacagatgcaggagagacagcgaggtcagctggtggagac
agcaatgtcactttgagctaccccagcctccatctccatgcgtacagcatcgagagcatg
acaacgtttcccaatggctgtggaaatggcaccaccgttacctgcatagttatggataat
aaagagccccaaaaccagactacctgtgtcagtcataacgggggttacagcaccagcaac
agtcatgaagaggaaattcaagaggataagctcagcccttccaaaatcatgcgctttttc
accacccctcggaaacgggctaattccagttccgacaggcctcgttctctggttttgatg
ggcaactcgaccacatggaatgctttgtcttccatcagaaaaatgggatctttcaagaag
ttgaaatcttcagttctccaaggaattcaaacaagggaatgctcggacgtcttaaatgag
aacggcgtaggcaaacatggttcaaacggggcagtggtgagagttcagactaacagatat
tcctattcggggcctctccatgatttccagaacgcagtggatggtttagcttctgactgc
tctgatgcggaggagagcgatgagtctttcctgaggaatactcatcgctcacgcagcatc
aggcgggcttatggtgctggccgcataaacttgctagacgcggataaagttcagagtcat
cacaactgtactaggccaacatcacctgtcattgcagagccaaagatctgtgaaattttg
gtgaaagactctgaaaacaacaggatcatttatcggagaagcaaaagttcggataatttg
aactttctgaaaaaaagctcgttcaaacggaagtccacctcaaacctcaccgacctcaag
gttgcaaatgaaaaacaaatgccaacaaggtctgtgagtgttacttctgctgactcggac
aaaaccggtgggaaccccgagaggagatccaagcgatggaagagccctatcagggcaaag
gattttgaccgagttttgaagcttgtcagtaacgttacagatgttgcatggaagaaggat
gaccccaagaccaccgctccttctcccactgagcagtcccagagaacaaggtcaaacagc
agactgcacgatgactactcccgcagggtttccagcagcacagaccatgacagaaagaga
tgcacctccccagtatctactccagactcttccttgccgggaacaccttgtctgcaaagc
cccacagttgctcaggataaagaggctgaaatgaatgtagctgttgctgaagacaaaagc
ctcaggatgtcatcgggtatcccagactctgatagcttatcacccacgctgaatgacatt
agtccatttcccaatgaagtgttttattcagactcagatgaaccaaaagctacacagcag
tttacacatgaagctgaaaaccctcacattccggtcaggccgactactccaaagcctcaa
agtcccactgcagagaaggtcaagtgcaatatgaatttccagtgcccaaaccatcacagc
acgtgttcactgagctcatcagagagcgaggagagagccgaggtaccaggtctgaagctg
ggcaggaatcctgtttgcttccaggactcggtgcaaactgtgtactatgatgatggcaat
gaagacagtggcataagcagtcactctcagctgagcctcaatttagcctctggtgctgaa
gagaaaaaggaagaggttgtttctgatgaccactggaagagatccccatcccaggatgaa
gacaagacagacacacaaaaggtcacacccaggagatggggctctggaaaaagatctcgt
cccagacctctctcagactatggccaaatgtcgatcagaagtttctctataccagaagat
gcagttgcggtggagtctcagaggacagactgcacggatggagaaaatcagccaggactg
gcttccatcgggtctgtgatccaaagcaatacagtaggctaccacagagggcgaaaaaga
agacccatctccgtaataggtggggtcaatttctatggaagcggtccagcggaagagata
gaaggtctgctgacacaacctgtaacacggccaccaattccagcgcaccaggtcccccct
tacaaagctgtttcagccaggttccggccgctcaccttttcacaaagtactcccatcggc
ctggaccgggttggacgaaggcggcagatgagaacatctaatgttgctgcagatggtggg
actgaatcttcggccttagtggacgacaatggcagtgaggaagactacagttacgaggag
ctctgccaagccactcccaggtacctgcagcccggaggggaacagctagcaattaatgag
ctgataagcgatggcagcattgtctatgcagaagctctctgggaccatgtgactatggac
gatcaagagctgggcttcaaagctggagacgtcattagagtcctagaagcttccaacaaa
gactggtggtggggaagaaatgaggacaaggaagcctggtttccagctagctttgtcagg
ctgcgagttaatcaggaagaagtgccagaaaattgtagtagtatccaggatgaagaacaa
gatgcagatattagcaagcatcgtcagaaaatagctgaaaacaaggatcagatgagaacc
aacgttatacaggaaattatgaacacagaacgagtctatatcaagcatctcaaggacatc
tgtgagggttatattcggcagtgtcgcaaacatacaggaatgttcaccccagctcagtta
agcaccatttttggaaatattgaagatatttacaagttccaaaggaagtttctgaaggat
cttgagaaacagtacaacaaagaggaacctcatctaagtgaaatagggtcatgttttctt
caacatcaagaaggctttgctatttattcagagtattgtaacaatcatcccagtgcctgc
attgaactttccaaactaatgaaacagggcaaataccgtcacttctttgaggcctgtcgc
ttgcttcagcagatgattgacattgccattgatggttttcttctcacacccgttcagaaa
atctgcaaataccctctgcagcttgcagaactgctcaaatacaccactcaggagcacagt
gattataacaacataaaagctgcatatgaggctatgaagaatgtagcgtgcctgatcaat
gagcgaaaacgaagactagaaagcatagacaagattgcacgttggcaagtctctatcgta
gactgggagggaccagatgtgttagccagaagctcagaactgatccactcaggagaactg
accaaaatatcaaagcaaggcaaaagccagcagaggactttcttcctttttgaccatcag
cttgtattctgtaagaaggacttactgagaagggacatcttgtattataaggatcgtatt
gacatggatgagatggaaattgtggacactgaagatggcagagacaaagactttaacatt
aatgtcaagaatgcttttaagatagtaaacagagcaacagaagagattcacttgttctgt
gcaaaaaaacaggaggataaaaagagatggatggaggcatgcgaaagtgagaggagaaga
gttcaggaagacaaggaaatgggaatggaaatctcagaaaaccagaagaaacaagccatg
cagaatgcccgtaagtcaaggcatggaaaaattaaaggtgtaagctacaacgggtgtcct
gtgccgcctccacaccaaagcctgcatcctattcatcagcgccacatcactgtgcctacc
agcatcccgcagcagcaggtttttgccctggcagaacccaagcggaagccatccctcttc
tggcataccttcaacaaactcacccccttcaaaaagtga
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