Grus americana (Whooping crane): 129207790
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Entry
129207790 CDS
T11359
Name
(RefSeq) sodium channel protein type 1 subunit alpha isoform X1
KO
K04833
voltage-gated sodium channel type I alpha
Organism
game Grus americana (Whooping crane)
Brite
KEGG Orthology (KO) [BR:
game00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
game04040
]
129207790
Ion channels [BR:
game04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129207790
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
SieB
Lustrin_cystein
New_glue
FraC
Motif
Other DBs
NCBI-GeneID:
129207790
NCBI-ProteinID:
XP_054685194
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Position
6:complement(21072250..21169485)
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AA seq
2013 aa
AA seq
DB search
MEQSVLVPPGPDSFQYFTRESLAAIEQRIAAEKAKNSKQDRKDDDENGPKPNSDLEAGKT
LPFIYGDIPPGMVSEPLEDMDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKI
AIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCL
EDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPENFTLETNITSQLNSTIG
ENGTLVNSTVTPFDWKGYIEDESHFYFLEGQNDALLCGNSSDAGQCPEGYTCVKAGRNPN
YGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLIL
AVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEAAQAAAVAAAAVTASAESREPSA
GGEAGGLSESSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHKSESEDSIRRK
GFRLSIEGNRLTYEKKYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDIGSENDFAD
DEHSTFEDNDSRRDSLFVPRRHGERRNSNISQASRSSRMLTVFPVNGKMHSTVDCNGVVS
LVGGPSVPTSPVGQLLPEVIIDKPATDDNGTTTETEMRKRISSSFHVSMDFLEDPALRER
AMSIASILTNTVEELEESRQKCPPCWYKFANIFLIWDCSPHWLKVKHIVNLVVMDPFVDL
AITICIVLNTLFMAMEHYPMTDEFNNVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGW
NIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGN
LTLVLAIIVFIFAVVGMQLFGKNYKECVCKIASDCVLPRWHMQDFFHSFLIVFRVLCGEW
IETMWDCMEVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAVTDDDNEMNNL
QIAVARMQKGIDYVKRKAREFIQKAFVKKQKALDEIKPLEDLNNKNSCISNHTTVELSKD
HDYIKDANGTTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEF
SSESDLEESKEKLNMSSSSEGSTVDIGLPAEEQPEAEPEEAQEPEACFTEGCVRRFKCCQ
VSIEEGRGKQWWNLRKTCFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLE
YADKVFTYIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIK
SLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF
YYCVNTTTDERFEVDQINNFSQCEELIKNNQSARWKNVKVNFDNVGFGYLSLLQVATFKG
WMDIMYAAIDSRDVLQQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKF
GGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTQQVFDISIMILICL
NMVTMMVETDDQSKEMENILYWINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVI
LSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNI
GLLLFLVMFIYAIFGMSNFAYVKREAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPI
LNSGEPDCDPNKAHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFGVAT
EESAEPLSEDDFEMFYEVWEKFDPDATQFMEFEKLSDFAAALEPPLHLPKPNKVQLIAMD
LPMVSGDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMASNPSKASYEPITTTLKRK
QEEVSAVIIQRAYRRHLLKRTVKQASFIYNKNKTEGGAGQGMKDEILIDKLNENSFTEKT
DITASTAACPPSYDRVTRPVKEKHEKGDKDVQK
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtcagtgcttgtaccaccaggaccagacagcttccaatacttcactagagag
tctcttgcagctattgaacaacgcattgctgcagagaaagctaagaattctaaacaagat
cgtaaagatgatgatgaaaatgggccaaagccaaacagtgatttggaggcaggaaaaaca
cttccgtttatatatggtgacatacctccaggaatggtgtctgagcccttggaagacatg
gacccatattacatcaataaaaaaaccttcatagtattgaataaagggaaggcaatcttc
cgattcagtgccacctccgccctgtacattttaactcctttcaatcctcttagaaaaata
gctattaaaattttggtacattcattattcagcatgcttatcatgtgcactattttgacc
aactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtagagtatacg
ttcactggaatttacacatttgagtcactcataaaaatcattgcaaggggcttttgctta
gaagattttacttttcttcgagatccatggaactggcttgatttcactgtcattaccttt
gcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcagagtt
ctccgagctttgaaaacaatatcagtcattccaggcttgaagactatcgtgggagcccta
attcagtctgtgaagaagctctcggacgttatgatcctgactgtgttttgtctgagtgta
tttgcactaatagggctgcagctgttcatgggcaacttgaggaataaatgcctgcagtgg
cctccggaaaattttactctggaaacaaatattacttcccagctaaacagtaccataggt
gaaaatggtacattggttaattcaacagtgactccatttgactggaaggggtacattgaa
gatgaaagtcatttttattttctggaagggcagaacgatgctctgctttgcggaaatagt
tctgatgctgggcagtgcccagaaggatatacatgcgtgaaagctggtagaaaccccaat
tacggctacacaagttttgacaccttcagctgggctttcttgtcactatttcgcttgatg
acgcaagacttctgggaaaacctttatcaattgactctacgtgctgctgggaagacatac
atgatattttttgttctggtgatttttctgggctctttctatctgatcaatttgatcctg
gctgtggttgctatggcctacgaagaacagaatcaagcaaccatggaagaggcagagcag
aaagaggcagaatttcaacagatgctggaacaactgaagaagcaacaagaagcagctcag
gcagcagcggtggcagcggcagcagtaacagcatctgcggagtccagggagcccagcgct
gggggagaagcaggagggctctcagaaagttcctcagaggcatcaaaattgagctcaaag
agtgcaaaagagaggagaaatagaaggaaaaaaagaaaacagaaagagcaatctggagga
gaggaaaaagatgaagatgaatttcacaagtctgaatcagaggacagcatcagaaggaaa
ggtttccgattatctattgaaggcaatagattgacatatgaaaagaagtattcttctcca
catcagtctttgctgagcattcgtggctccctgttttctccaaggcgcaacagcagaaca
agtcttttcagcttcagaggtagagcaaaggatataggatcagaaaatgactttgctgat
gatgagcacagcacttttgaagacaatgatagcagaagagattctctctttgtgccgcgc
agacacggtgaacggcgcaacagtaacattagtcaggccagtaggtcatccaggatgctg
acagtgtttccagtgaatgggaagatgcacagcactgtggattgcaatggggtggtttcc
ctggttggtggaccatctgttcctacatcgcctgttggacagcttctgccagaggtgata
atagataaaccagctactgatgacaatggcaccactacagaaacagaaatgaggaagaga
atatcaagctctttccacgtttctatggacttcctggaagatcctgctttaagggaaaga
gccatgagtattgctagcatcctcacaaacactgtggaagaacttgaagaatcgagacag
aaatgcccaccatgctggtataaatttgcgaatattttcttgatctgggactgcagtcca
cattggttaaaagtaaaacatatcgtcaacttagtggtaatggacccgtttgttgacctg
gctattacaatttgcattgttttaaatacactttttatggctatggaacattatccgatg
accgatgaattcaataatgtactttcagttggaaatctggtcttcactggaatcttcaca
gcagaaatgtttctcaagataattgcaatggatccttactattattttcaggaaggctgg
aatatttttgatggttttattgtaacccttagcttggtcgagcttggtcttgcagatgtg
gaaggactctcagttcttcgatcattcagattgttacgagttttcaaattggcaaaatct
tggccaactctaaatatgctgataaaaattattggtaactctgtgggagctctgggaaat
ctgaccctggtgctggccatcattgtgttcattttcgctgtggttgggatgcagctcttt
gggaaaaactacaaggaatgtgtctgcaaaattgcaagtgactgtgtacttccacgctgg
cacatgcaagatttttttcactcttttttgatcgtatttcgagtattgtgtggagaatgg
atagaaacgatgtgggactgcatggaggttgctggtcaagccatgtgccttactgtcttc
atgatggtcatggtgattggaaacctagtggtactgaacctatttttggccttgctgttg
agctcatttagtgcagacaacctagccgtgacagatgacgacaatgaaatgaataatctc
caaattgctgtagcaagaatgcagaagggcatagattatgtgaaaagaaaagcacgtgaa
ttcatccaaaaagcttttgttaaaaaacaaaaagctttagatgaaatcaagccacttgaa
gatttgaacaacaaaaatagctgtatttctaaccatacaactgtggaactaagcaaggac
catgactatattaaagatgcgaatggaacaactagtggcataggcacaggcagcagtgtg
gaaaaatatataattgatgaaagtgattacatgtcattcataaacaacccaagcctcact
gtgacagtgcccattgctgtgggtgaatctgactttgaaaatctaaacacagaggaattc
agtagcgaatcagacttggaagaaagcaaagagaaattaaatatgtctagttcttccgaa
ggtagcacagttgatattggacttcctgcagaagagcaaccagaagctgaacctgaagaa
gcccaggagccagaggcctgcttcacagaaggctgtgtacgaaggttcaagtgctgtcaa
gtaagcatagaagaagggagaggaaagcagtggtggaaccttagaaaaacctgcttcaag
attgttgaacacaactggtttgagactttcattgtctttatgattctcctcagtagtgga
gctctggcttttgaagacatatatattgaacagcgtaaaactatcaagaccatgctggaa
tatgctgacaaggtcttcacttacatcttcattttggaaatgctgctgaagtgggtggcc
tatggttatcaaacatactttactaatgcctggtgctggctggacttcctgattgtcgat
gtctctttggttagcttaacagcaaatgcattgggttactctgaactgggtgccattaag
tcccttaggactctaagagctttgagacctctaagagctttgtcacgatttgaaggcatg
agggtggttgtgaatgcccttttaggagcaattccatccatcatgaacgtgcttctcgtt
tgtcttatattctggctaattttcagcatcatgggagtaaatctgtttgctgggaagttc
tactactgtgttaacaccacaactgatgaaaggtttgaagtcgaccaaatcaacaatttt
agtcagtgcgaggaactcataaaaaacaatcaaagtgcccgatggaaaaacgtgaaagta
aactttgataatgtaggatttgggtatctttctttacttcaagtagctacatttaaaggc
tggatggatattatgtatgcagctattgactcaagagatgtgttacagcaacccaagtat
gaagacaacctgtatatgtatttgtattttgtcatctttataatttttgggtcttttttc
accctgaacctgttcattggtgtcattattgataacttcaatcagcaaaaaaagaagttt
ggaggtcaagacatatttatgacagaagagcagaagaaatactacaatgcaatgaaaaag
ctgggatccaaaaaaccacaaaaacctataccaagaccagggaacaaattccaaggcatg
gtctttgattttgtgacacagcaagtatttgacatcagcatcatgattcttatttgtctt
aacatggttaccatgatggtagaaactgatgaccagagtaaagaaatggaaaatattttg
tactggataaacctggtgttcattgtccttttcactggagaatgtgtcctgaaattaatt
tcacttcgccattactatttcactataggctggaacatttttgattttgtagttgtcatt
ctctcaatagtaggtatgtttttagccgagatgatcgagaaatattttgtatcccccaca
ctgttcagagtcatccgacttgccagaatcggtcgaatcctgcgtctcattaaaggcgct
aaggggatccgcactctgctttttgctttgatgatgtctcttcctgctttgttcaacatt
gggctgctgctcttcctggtcatgttcatctacgcgatatttggcatgtccaactttgcc
tatgttaagagggaagctggtatagatgacatgttcaactttgaaacgtttggcaacagc
atgatctgcctgtttcaaattaccacatctgctggctgggatggtttgctagccccaatt
cttaacagtggggagccagactgtgacccgaacaaagctcatccaggaagctccgtgaaa
ggcgactgcggcaacccttccgttgggattttcttctttgtcagctacattatcatatcg
tttctggtagtggtgaacatgtacattgctgtgattttggagaacttcggtgttgctact
gaagaaagtgctgaacccttgagcgaggatgactttgagatgttctatgaggtctgggag
aagtttgatcctgatgcaacacaattcatggaatttgagaaactgtctgattttgcagca
gcacttgagcctcctcttcatctccccaaaccgaacaaagtccagcttattgcaatggat
ctgcccatggtaagcggtgacagaattcactgccttgacatcttgtttgctttcacaaag
cgtgttttgggggaaagtggggagatggatgccctcagaatacagatggaagatcggttt
atggcatccaatccttcaaaagcttcctacgaaccaattacgaccacattaaaacgaaaa
caggaggaggtgtctgctgtcattattcaacgggcttatagacgtcatcttttaaaacga
acagtaaaacaagcttcatttatctataacaaaaacaaaaccgaaggaggggctggtcag
ggtatgaaagatgaaatccttattgacaagttaaatgaaaactcatttacagagaaaacc
gatataactgcatcaacagcagcttgtccaccttcttatgatcgtgtaacaaggccagtc
aaagaaaagcatgaaaagggagataaagatgttcagaaataa
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integrated database retrieval system
