Grus americana (Whooping crane): 129207978
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Entry
129207978 CDS
T11359
Symbol
HDAC4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
game Grus americana (Whooping crane)
Pathway
game04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
game00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
129207978 (HDAC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
game03036
]
129207978 (HDAC4)
Enzymes [BR:
game01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
129207978 (HDAC4)
Chromosome and associated proteins [BR:
game03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
129207978 (HDAC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129207978
NCBI-ProteinID:
XP_054685888
LinkDB
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Position
6:complement(42079869..42328041)
Genome browser
AA seq
1118 aa
AA seq
DB search
MLQSYNTEKREVVSFGHAAFASRAQYSCVFYAEMQKDGLSGRDQPVELLNPPRVNHMPSS
VDVTTALPLQVAPTSVPMDLRLDHQFSMPVTEPTLREQQLQQELLALKQKQQIQRQILIA
EFQRQHEQLSRQHEAQLHEHIKQQQEMLAMKHQQELLEHQRKLEQHRQEQELEKQHREQK
LQQLKNKEKGKESAVASTEVKMKLQEFVLNKKKALAHRNLNHCISSDPRFWYGKTQHSSL
DQSSPPQSGVSGTYNHPVLGMYDSKDDFPLRKTASEPNLKLRSRLKQKVAERRSSPLLRR
KDGPVVTALKKRPLDVTGTSDSACNSAPGSGPSSPNNSSNNISAENGIAGSVTSIQAETS
LAHRLVNREGSVTQLPLYTSPSLPNITLGLPATGPSSGGSAQQDAERLTIPTLQQRISLF
PGTHLTPYLSTTTLERDGGTAHNPLLQHMVLLEQPTAQTPLVTDWYLSGLPLHAQSLVGG
ERVSPSIHKLRQHRPLGRTQSAPLPQNAQALQQLVIQQQHQQFLEKHKQQFQQQQLHINK
IISKPNEPARQHESHPEETEEELREHQALLEEPYGDRVASQKEAPGMANMVQVKQEPIES
DEEEAEPQQELESGQRQAEQELLFRQQALLLEQQRIHQLRNYQASLEAAGMPVSFGGHRP
LSRAQSSPASATFPMSVQEPPTKPRFTTGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIW
SRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKLDSKKLLGSLTSMF
VRLPCGGVGVDSDTIWNEVHSSGAARLAVGCVIELVFKVATGELKNGFAVVRPPGHHAEE
STPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYD
DGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPDV
VLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICDASE
ACVSALLGNELDPLPEKVFQQRANANAVHSMEKVIEIHSKYWHSLQRYASTVGYSLVEAQ
KCENEEAETVTAMASLSVGVKPAEKRPDDEPMEEEPPL
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgttacagtcctacaacactgaaaagagagaggtggtcagcttcggacacgctgcattt
gcttccagggcacaatatagctgtgtcttctatgcagagatgcagaaagatgggctttct
ggcagagaccagccagtagagctgttgaatccacctagagtgaaccacatgcctagctct
gttgatgtgaccacagcactgcccttgcaagttgcacccacttcagtcccgatggatctg
cgcttggaccaccagttttccatgcccgtgacggagccaacgctgcgggaacagcagctt
cagcaggagctcctggcgctcaaacagaaacagcagatccagcgacagatcctcatcgcc
gagttccagcggcagcacgagcagctctcccggcagcacgaggctcagctccacgagcac
atcaaacagcagcaggagatgctggccatgaagcatcagcaggagctgttggagcaccag
aggaagttggagcagcaccgacaggagcaggagctggagaagcagcaccgagagcagaaa
cttcagcagctcaaaaacaaagagaaaggaaaagagagtgcagtggcaagcacagaagta
aagatgaaattacaagaattcgtcttaaataagaagaaggcattggcacaccggaatctc
aaccactgtatatccagtgatcctcgcttctggtatgggaagacacagcacagctctctg
gaccagagctccccaccccaaagtggcgtatccggcacctacaatcaccctgtactgggg
atgtatgattccaaagacgacttcccactcagaaaaacagcgtctgaacccaatctgaag
ttacgatccagactaaagcaaaaagttgctgaaagacggagcagccccctcttgcgcaga
aaagatggtccggtggttactgcccttaagaagcgcccgctggatgtcacaggtacgtcg
gactccgcatgcaacagcgctcctggatctggtcccagctctccaaacaacagctccaat
aacatcagcgccgagaacgggattgcaggatcagtcacgagtattcaggcagagaccagc
ctggctcacagacttgtgaatcgcgaaggctcggtaacgcagcttccgctctacacgtct
ccttctctgcccaacatcacgctaggactgcccgcaactggtccttccagcggaggatcg
gcgcagcaggatgcggagagacttactatcccgaccttacagcagcgaatctctttattt
cctggcactcacctcactccctacttgagcactacaacgttggaaagagatgggggaacc
gcacataaccctcttctgcaacacatggtcttactggaacagccgacggcacaaactccc
ttagtcacagactggtatctttcaggactgcccctccatgcacagtctctggttggtgga
gaacgggtctccccttcaatacacaaactccggcagcatcgcccgctggggcgcacgcag
tctgctccccttccccagaacgcccaggccctccagcagttagtgatccagcagcagcac
cagcagttcttggagaaacacaaacagcaattccagcagcagcaactgcacatcaacaag
attatatcaaaacccaacgaaccagctcgccagcatgaaagccaccctgaggagacagaa
gaggagttacgggaacaccaagcccttttggaggagccatacggcgacagagtcgcaagc
caaaaggaggccccggggatggccaacatggtgcaagtgaaacaagaacccatcgagagc
gatgaggaggaagcagagccgcagcaggagctggagtctgggcagagacaggctgagcag
gagctgctcttccgtcagcaagcccttctgctggagcagcaacgtatccaccagctgaga
aactaccaggcgtcgctggaggcagctggcatgcccgtctctttcggagggcaccgacct
ctgtcccgcgcacagtcctcacccgcctcggccaccttcccgatgtccgtacaggagcca
cccactaagccaaggttcacaacaggccttgtatacgacaccttgatgctgaaacaccag
tgtacctgtggaaacacaaacagccacccggagcatgcggggaggatccagagcatctgg
tcccggctccaggagacgggtctccgtggcaagtgtgagtgcattcgtggaagaaaagca
actctagaagagctgcagacagttcactcggaagcccatacgctgctgtacggcacaaac
cctctgaacagacagaaactggacagcaagaaacttctaggttctctaacgtcgatgttt
gtcaggcttccttgcggtggtgtcggggtcgacagtgacacgatttggaatgaagttcac
tcgtccggcgccgctcgcctggctgtgggctgtgtcatcgagctcgttttcaaagtggcc
acgggagaactgaagaatggatttgctgttgttcggcctccaggtcaccacgcagaagag
agcacacccatgggtttctgctattttaactcggtggcaatcgcagccaagctgctccag
caaaggctgaacgttagcaaaatccttatagtggactgggatgttcaccacgggaatggt
actcagcaagctttctacaacgatcctaacgttctttatatttcactacatcgctatgat
gatgggaacttctttccaggcagcggtgcgcccgacgaggtcggcacaggagcaggagtt
ggtttcaacgttaacatggcctttactggtggccttgacccaccgatgggagacacagaa
tacttaactgctttcaggacggtggtaatgcccattgccaatgaatttgccccagatgtt
gtgctggtgtcatctggtttcgatgcggtggaaggccatcccacacctctcggaggatat
aacctatcagcaaaatgcttcgggtacctgacaaagcagctgatgggcctggccgggggt
cgcgtcgtcctggcccttgaaggaggccacgacctgacagccatctgcgatgcctcagaa
gcgtgcgtctccgctttgctgggaaacgagctcgaccctcttccagaaaaggttttccag
cagagagcaaatgctaatgcggtgcattcaatggagaaagtaatcgagatacacagcaag
tactggcattcactccagcgttacgcctccacggtggggtactccctggttgaggcgcag
aagtgcgagaacgaggaggcggagacggtaacggccatggcatctctgtcagtgggcgtg
aagccagctgagaagagacccgatgatgaacctatggaagaggaacctcccctgtag
DBGET
integrated database retrieval system
