Grus americana (Whooping crane): 129208160
Help
Entry
129208160 CDS
T11359
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
game Grus americana (Whooping crane)
Brite
KEGG Orthology (KO) [BR:
game00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
game03041
]
129208160 (DDX18)
03009 Ribosome biogenesis [BR:
game03009
]
129208160 (DDX18)
Enzymes [BR:
game01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129208160 (DDX18)
Spliceosome [BR:
game03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129208160 (DDX18)
Ribosome biogenesis [BR:
game03009
]
Eukaryotic type
90S particles
Helicases
129208160 (DDX18)
Pre-60S particles
129208160 (DDX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
129208160
NCBI-ProteinID:
XP_054686425
LinkDB
All DBs
Position
6:10146495..10158489
Genome browser
AA seq
648 aa
AA seq
DB search
MSVSVSVSNLPMRLLRRKIHKRNLKLRQRNLKLRAAEGAVPPPDEPVSQGPPGEEEEEAA
APEVEAVAAGAGAEAADAAGPRGGEEKKRKKKKRKAAAKVEEDTETKKAKPEEDASVEVE
DEDKEDSGEKEVEEEGEEDEVPSLPLGVTGAFEDNSFTSLAGVVSENTLKGINDMGFTHM
TEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAIELIYKLKFMPRNGTGVIILSPTRE
LAMQTYGVLKELMNHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGF
MYKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRRQTMLFSATQTRKVEDLAKISLKKE
PLYVGVDDNKETATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHY
ELLNYIDLPVLAIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPEVDWIVQYDP
PDDPKEYIHRVGRTARGINGRGHALLILRPEELGFLRYLKQARVPLSEFEFSWSKISDIQ
SQLEKLIEKNYFLHKSAQEAYKAYIRAYDSHSLKQIYNVNNLDLPKVSLSFGFKVPPFVD
LNVNSNHGRRLQKRGGGGGFGYQKSKNVHKAKIFKHISKKSDSRQFSR
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgtcggtgtccgtgagtaacctgcccatgcggctgctccgcaggaagatccac
aagcgcaacctgaagctgcggcagcggaacctgaagctgcgggcggccgagggggcagtg
cctccgccagacgaaccggtgtcgcagggccccccgggggaggaggaggaggaggcggcg
gccccggaggtagaagcggtggcggctggagcgggcgcggaggctgcggatgctgccggg
ccccgcggaggggaggagaagaagaggaagaagaaaaagaggaaagcggcggctaaggtg
gaagaagatacagaaactaaaaaagcaaaacctgaagaagatgcatctgtggaggtagaa
gatgaagataaggaggattctggagagaaagaagtggaagaggagggggaggaggatgaa
gtgcccagtttaccactaggtgtaacaggtgcttttgaagacaattcttttacttccctg
gctggtgttgtcagtgagaatacactgaaaggcataaatgatatggggtttacacacatg
accgaaattcagcataaaagtattaagccacttctggaaggcagggatattttagcagct
gcaaaaacgggcagtggcaaaacacttgcatttcttattcctgcaatagagctcatctac
aagttaaaattcatgcctagaaatggaacaggtgtcattattctttctcctactcgagag
ctcgctatgcaaacctatggagttcttaaagaacttatgaatcatcatgttcatacatat
ggtctgataatgggaggcagtaacagatcagcagaagcacagaaacttggaaatggaatc
aacatcattgtagcaacaccaggaagactgctggatcatatgcagaacactccgggtttc
atgtacaagaacttgcagtgtttggtaattgatgaggcagatcgtatcttggaggttgga
tttgaagaagaaatgaaacagatcataaaacttctaccaaagcgcagacagacaatgctt
ttttctgctacacaaaccagaaaggttgaagatctggcaaagatctctctgaagaaagag
ccgctatacgttggggttgatgataacaaggagacagcaacagtagatggtcttgaacag
gggtatgtagtgtgtccatctgaaaaaagattccttttgctcttcacattcctcaagaag
aaccggaagaagaaactaatggtatttttttcttcatgtatgtcagtgaagtaccactat
gaattactcaactatattgatctgcctgttttggccattcatggcaagcagaaacaaacc
aaacgcactacaacatttttccagttctgtaatgcagaatctggaatactgttgtgcacc
gatgtcgctgccagaggattggatattcccgaagttgactggattgtccagtatgaccct
ccagatgacccaaaagaatatattcatcgtgttggtagaacagccagaggcataaatggt
agaggacacgctctgctcattttaagaccagaagaactgggctttcttcgttacctaaaa
caagccagggtacccctaagtgaatttgaattttcttggtcaaaaatttcagacatccag
tctcagctcgaaaagctgattgagaagaactacttccttcacaagtcagcccaggaagca
tacaaagcttatattagagcttatgactcccattctctgaagcagatctacaatgtcaat
aacttggatcttcccaaagtcagcctgtcgtttggttttaaagttcctccatttgttgac
ctcaatgtgaacagcaaccatggcagaagactccagaaaagaggtggaggtggaggattc
ggttaccagaaatcaaagaatgtccacaaagctaaaatcttcaaacacattagcaagaaa
tcagacagtcggcagttttctcgttaa
DBGET
integrated database retrieval system
