Grus americana (Whooping crane): 129208515
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Entry
129208515 CDS
T11359
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
game Grus americana (Whooping crane)
Pathway
game03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
game00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
129208515 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
game03036
]
129208515 (ERCC6)
03400 DNA repair and recombination proteins [BR:
game03400
]
129208515 (ERCC6)
Chromosome and associated proteins [BR:
game03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
129208515 (ERCC6)
DNA repair and recombination proteins [BR:
game03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
129208515 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
DEAD
Motif
Other DBs
NCBI-GeneID:
129208515
NCBI-ProteinID:
XP_054687255
LinkDB
All DBs
Position
7:20203811..20254853
Genome browser
AA seq
1501 aa
AA seq
DB search
MPTDNNHLPDSVRERDPVTTSSNNCLHNAEELGIEQENGICNSDLGNSIGVPNSASQSSA
SLAVPLEVPRRGQPFLQINRQQIESVSYSAQAAELKGLGVDVYDQDVLEQGVLQQVDNAI
NEANKATKIADAEKEYQSVLDDLRSCTTSLKQINKIIEQLSPQAADNKDINRKLDSVKRQ
KYNKEQQLKKIKAKQKRLQAILGGTEILDKVNEIEFEQDEEPGPSCLGSMLMPVQETEWE
ELIRTGQMTPFGTKIPQKPERKIRQLMLNEASDFEKYLADQAQLSSERKKLALHKRAKKK
AQAKNVQCVAPASTTEEKRGKALSKTDKRLKKHLRKLQKHALQIQSKAEIPQEKKYPEAK
KFRHEQDDDSGESEYVPDEELFDPEAAEEEEEQASSRAENDSDYELKNLSRKRKCLVKRN
FKEAEDDDDFFPSSEEEEHTLGKRKVKRWRDDGDEDYYKQRLRRWQKERLKDKEHQTAEE
LSEESDTEFEEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIA
FLAGLSYSKIRTRGSNYRYQGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHETGSYT
DKKVKLIREIASCHGILITSYSYIRLMQDNIHSYDWHYVILDEGHKIRNPNAAVTLACKQ
FRTPHRIILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYANASPVQV
KTAYKCACVLRDTINPYLLRRMKADVKMNLSLPDKNEQVLFCRLTDEQRQVYQNFINSKE
VYQILNGDMQIFSGLVALRKICNHPDLFSGGPRILKGVPDAEVEEADQLGYWKRSGKMIV
VESLLKIWHKQGHRVLFFTQSRQMLQILEVFVRDRNYSYLRMDGTTTIASRQPLVTRYNE
DKSIFIFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLL
TAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLSNPDVSQGTETSAIFA
GTGSDVQVPKHQLKRKLEKPPDNDTSKGDLHLTENRSPKYSKSSNSYSTTRMTNSSSQAI
ETSEETKGNLEAFGQNSYAKDNVQAATNTNSLNKSKEESLERADKSMSQSLPADAGSLEN
AKCLNTVVADEVCRAANANVKGDFSLTCGAAGSWEKQVAKTEDEQLDNNHYKCTSKTKHR
VGMLSHESHKDKSKKKYHKDAKFEGERIPHLVKQKQYRRENSEEKEEDSKKNDDYVLEKL
FKKSGVHSVMKHDAIMEATSADHVLVEAEANRVAQDALRALKVSRQRCLGAASGVPTWTG
MSGLSGAPSGIKSRFGQKRNSMLLSSHSTCASPAKKCKDADTIKKENVKKCSSNGHFDGK
SGESSSSALDSSSLLAKMRARNHLILPQHTGNEGDERDENPQQAPTPASTEYDELLVDMR
NFIAFQAHGDGEASTRELLHEFESKLPAAQSCVFRELLRNLCTFHRSPSGEGVWRLKPEF
R
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgccaacagacaacaaccacctgccagacagtgtccgagaacgtgaccctgttactact
tcaagcaataattgcctgcataatgctgaggaattgggaattgaacaagaaaatggcatt
tgtaacagtgacttgggtaatagtattggagttcccaactctgccagccagtcatccgct
tccctggctgttcctttggaggtgcccagaagaggacaaccctttttacagatcaacagg
cagcagattgagtcagtctcatacagtgcacaggctgctgaactcaaaggtttaggagtt
gatgtctatgaccaggatgtgttggagcaaggagttcttcagcaagtagataatgccatt
aatgaagctaataaagcaacaaaaatagctgatgcagagaaagaatatcagtcagtgctg
gatgacttaagatcatgtacaacatctctgaaacaaataaataaaattattgagcaactt
tcacctcaagctgctgacaacaaagatataaacagaaaactagattctgtaaaacggcag
aaatataacaaggagcaacagctgaagaagatcaaagcaaaacaaaagcgtctccaagca
attcttggtggaacagagattcttgataaagtaaatgagattgaattcgagcaagatgaa
gaacctggtccatcatgtcttggcagtatgcttatgcctgttcaggaaacagagtgggaa
gagcttattcgtactggccagatgactccatttggaactaaaatacctcagaagccagag
aggaagatacgtcaattaatgctaaatgaagcatctgattttgagaagtacttagcagac
caagctcaactgtcatctgaaagaaagaagttagcccttcacaaaagagcaaagaagaaa
gcacaagccaaaaatgttcagtgcgtagctcctgcatctactacagaggaaaaaaggggt
aaagccctgtcaaaaacagataaacgcttaaaaaaacacctgagaaaacttcagaagcat
gcccttcagattcagtcaaaggcagagattccacaagaaaagaagtatcctgaggccaag
aagttcaggcatgaacaggatgatgatagtggagagtctgagtatgtacctgatgaggag
ctctttgatccagaagcagcagaagaggaggaagagcaggcatcttctcgtgctgagaat
gattctgattatgaactcaagaatctgtcaagaaaaagaaaatgtttggtgaagagaaat
tttaaagaagctgaggatgatgatgacttctttccaagctccgaggaagaggagcatacg
ctggggaagcgcaaagtaaagagatggagagatgatggagatgaagactattataaacag
agactaaggaggtggcaaaaagaacgtttgaaggacaaagaacatcaaacagctgaggaa
ctttctgaagaaagtgacactgaatttgaagagggtttcaaagtaccaggatttctcttc
aaaaagcttttcaagtaccagcagacaggtgttaggtggctctgggaattgcactgccag
caggcaggaggaattctgggagatgagatgggattgggcaagaccatccagataattgcc
ttcttggcaggtctgagctacagcaagatcaggactcgtggttcaaattacaggtaccag
ggattgggtccaacagtgattgtttgtccagctactgtgatgcatcagtgggtaaaagaa
ttccacacttggtggcctccatttagagttgccgttctccatgaaactggttcttacact
gacaaaaaggtgaaactaattcgtgaaattgcttcatgccatggaattttaattacatct
tattcatacattcgactgatgcaggataacatccacagctatgactggcattatgtgatt
ctggatgagggtcacaaaatccgaaatccaaatgccgcagtcacacttgcatgcaagcag
ttccgcacaccccatcgaatcatcttgtctggctctcccatgcaaaataatctaaaggag
ctctggtccctctttgactttgtattcccagggaaattgggaacactgcctgtgttcatg
gagcaattttctgttccaataacaatgggaggatatgccaatgcctctcctgtccaggta
aaaactgcatacaaatgtgcctgtgtgttaagggacaccataaacccctacttgctgcga
agaatgaaggctgatgtaaaaatgaacctttcacttccagataaaaatgaacaggttctc
ttttgccgtttgacggatgagcagcgtcaagtctatcaaaatttcatcaactctaaagaa
gtttaccagattctcaatggagacatgcagattttctcaggactggtagctttgagaaag
atttgcaaccaccctgacctcttctctggtggtcccaggattttgaaaggtgtaccagat
gctgaagtggaggaagcagatcagcttggatattggaaacgttctggaaaaatgatagtg
gtagaatccttgctgaaaatatggcacaagcaaggtcacagagtgttgttttttacgcag
tcaagacagatgctgcagatacttgaagtctttgtgagagacagaaactattcctacctc
aggatggatggcaccacaacaatagcttccagacagcccctggtaacaagatataatgag
gacaaatccatatttatttttcttctaacaactcgtgttggtggcattggagttaacttg
actggtgctgaccgggttattatttatgatcctgactggaatcccagtacagacacacag
gctcgggaacgtgcttggagaataggccaaaagaaacaggtgactgtgtataggcttctc
actgcaggtactattgaagagaagatataccacagacaaatcttcaaacagtttttaaca
aatagagtgctgaaagaccctaagcagaggcgctttttcaaatcaaatgacctttatgaa
ctttttactctgagcaacccagatgtgtctcaggggacagaaacaagtgcaatttttgca
ggtactggttcagatgttcaagtcccaaaacaccaattgaaacggaaacttgaaaagcca
cctgataatgacacttctaaaggtgatctccatcttacagaaaacaggtcgccaaagtac
agcaagtcatccaattcctactcaacaactcgcatgacaaattcttcttctcaagcaata
gagacaagtgaggaaaccaaaggaaatttggaagcctttggccaaaatagctatgcaaaa
gataatgtgcaagctgctactaatacaaattcattgaataaaagcaaggaggaaagcttg
gaaagagctgacaaatctatgtcccagtcattgccagctgatgcagggtctttggagaat
gccaaatgtctgaacactgtggtggctgatgaagtatgtagagcagctaatgcaaatgtc
aagggagattttagccttacatgtggtgcagctggctcttgggaaaagcaggttgctaaa
actgaagatgagcaattagataataatcattataaatgtacctcaaaaacaaagcacagg
gtgggtatgctgtcacatgaaagccacaaagataagtctaagaagaaatatcacaaagat
gccaaatttgaaggagagcgcattcctcatctagtgaaacaaaagcaatacagaagggag
aacagtgaagagaaggaggaagactcaaagaaaaatgatgattacgtcttggagaaactt
ttcaaaaaatcaggggtacacagtgttatgaagcatgatgccattatggaagctaccagt
gcagatcatgtgctggtggaagcagaagcaaacagagtggcccaagatgccttaagagcc
ttaaaagtctctcgacagcgatgtttaggagctgcttctggtgttccaacctggacaggc
atgagtggtctttcaggtgcaccatcaggaataaagagtcggtttggtcaaaaaagaaac
tccatgctgctttcttcacattccacttgtgcatcacctgcaaagaagtgcaaggatgca
gatacaataaagaaagaaaatgtaaagaagtgtagttccaatgggcactttgatggaaaa
tcgggagaatcatcatccagtgcactagactcttcatctttattagctaagatgagggca
agaaaccacctcattttaccacaacacacagggaatgagggagatgagagagatgagaat
cctcagcaagcacccaccccagcttcaacagaatatgatgagctgcttgtggatatgcgt
aacttcatagcgttccaggcccacggggacggtgaggctagcactcgggaactattgcac
gaatttgagtccaaactgcctgcagcgcagtcctgcgtctttagagaacttctccgcaat
ctctgcaccttccataggagcccaagtggtgaaggtgtctggaggctaaagccagaattc
cgctga
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integrated database retrieval system
