Grus americana (Whooping crane): 129208605
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Entry
129208605 CDS
T11359
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
game Grus americana (Whooping crane)
Brite
KEGG Orthology (KO) [BR:
game00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
game03036
]
129208605 (JMJD1C)
Chromosome and associated proteins [BR:
game03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
129208605 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
FYVE
C1_2
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
129208605
NCBI-ProteinID:
XP_054687570
LinkDB
All DBs
Position
7:complement(34792081..34959357)
Genome browser
AA seq
2526 aa
AA seq
DB search
MAVETRPELVGKRFLCVGGGGEEPPESGRWRAGVIRAVSQRDSHSPDLAVYVEFDDLEWE
KREWVKVYEDFATFLVEYQLVWAKRKDPSQTQGSKIKQIQWPALTFKPLVGKSVYNSITA
VEFLVDKQLDFITEDSAFQPYQDDVDSLNPVLRDNPQLHEEVKAWVKEQKVQEIFMQGPY
SLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMVVMNDQVLEPQNVDPSMVQMTFLDDVV
HSLLKGENIGITSRRRSRSNQNSNTVHGHYTRAQANSPRPAMNSQTAAPKQNSHQHQQQR
NTRPNKRKGSDSSMPDEEKMKEERYDYIGRGENPKTKNKHFLSKRRKPEEDEKKLSMKRL
RTDNISDYSESSDSEISNKRLTDSPSEQNSENELKSKNTSKINGEEGKSQAIEGVEQTLT
DRRSPWDEIQEDKKHEETERLKSSVLDQQEKSSLHAAEQPTPYEQNAKDPHVQECNAELK
NEQFVPRPPTPKCVVDITNENNSEKESRDNAASTFGLQTVQKIESHSSDLKQQFANANFL
EARKQEADQSWVSSGVKTDLIQPGVVKTLSVNEHLNPEKEKVQYGSFMSPLNVASLAEES
KLHKQSPVPDSVKSKPSASVDHPKTKSPDVKPKFTQSSDTVKSKVSSQNSHATGLTRSAN
KTDHDLPRSSFHPVPARVSALEATKSPLIIDKNEHFTVYRDPTLIGQETGTNHISPYLHQ
HNYPLHSSSHRTCLNPNAHHPALTGSSHLLAGSSAQAPLSAINTHPLSTASHHSVHHPHL
LPAVLPGVPAASLLGGHPRLETAHASSLSHLALAHQQQQQMLQHQSPHLLGQAHPSASYN
QLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPETPVNAEASLRRNTPSPWLHQPTPVTSAD
SLGLLSHIPVRPSSADPLRPLKLTTHSSPPLSKSIVEHHKEELERKAFIEPLRSVTTAPV
KTELEQSRTQTAKESHMHRHFADPMLNQLPRPPQETGERLSKYKEEHRRILQESIEVAPF
TAKIKALEGERENYSRVTSLSSSPKSHSVKYDKDAERSVSELYKMKHSVPQSLPQSNYFT
TLSNSVVNEPPRSYPSKEASSVYVDKQTNCPSTAASPQSLPSYISSLSKPPPLIKHQPES
EGSASKIPEQLSQSVQSHSVNSFRSDSRSPTQLSISSSNTLRSMPALHRAPVFHPPVHQN
LEKKESSYSSLSPPTLTPVQPVNAGAGKIQELQKPPTLVPEPKEAQTVYKGASEQNLSEV
WKSNNAPNNEKVDWHAERMSGKSQSATASVIVRPPSSTKYDSVPVMQSASKDRVSERSSA
VTNQADCLKTAEARETGRIILPNMNSDSARTQYEKKFPAVSQGSVPRAVTPTTTMICSTK
MDVTASAATTTSVSSWGSSEVTYSLSNTVLACAPLECTTSRAASQAVAQTQECKVSTPAP
VTPAAGKTGSAAQPSSGFSTSTDFVHLKKHKAALAAAQFKSSNTSETESNSVKNQTFSTS
LSLDSAIVCNTINKANSVGSGQTSQTSQPNYHTKLKKAWLTRHSEEDKNTNKKENSGNSV
SEIIKPCTVNLIASTSNDLQNNIDSKILVDKLAKEDKHPRRKAKRTYESGSESGDSDESE
SKSEQRTKRQPKPTYKKKQNDLQKKKGDPEEEVKPNGVLSRSAKEKSKLKLQSGSNSTGI
PRSVLKDWRKVKKLKQTGESFLQDDSCSEIGPNLQKCRECRLIRSKKGEEPTHSPVFCRF
YYFRRLSFSKNGVVRIDGFSSPDQYDDEALSLWTHENYEDDELDLETSKYILDIIGDKFC
QLVTSEKTAMSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKA
KERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHNIREKFEMKSHCQ
CSSKQSMQTGKLPAMNGVSQVLQNVLNHSNKISLCMPESQQQNTPQKSETNGNTSPRSDV
STDSKLTPPESQSPLHWLADLAEQKAREEKKENKECPPGKHAKEEKDQDNLESPNCKSSP
PASQNNEQGSTLRDLLTTTAGKLRLGSTDAGIAFAPVYSTGTASGKSGRTMPNILDDIIA
SVVENKIPPNRAPKINVKSEIKDEPKDDRKCIQDDCSKLYSDIQYSWICDKHVLWLRDHK
NNNNWKLFKECWKQGRPVLVSGMHKKMNFSLWKAESISLDFGNQQADILNCKDSIISNTN
VKEFWDGFEDVSKRQKIKNGETALLKLKDWPSGEDFKAMMPARYEDLLKSLPLPEYCSPE
GKLNLASHLPGFFVRPDLGPRLCSAYGVAATKDHDIGTTNLHIEVSDVVNILVYVGIAKG
NGVLSKSGVLKKFEEEDLDDLLRKRLKDSSELPGALWHIYAGKDADKIREFLQKIAKEQG
LEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVKTCTVIQFLGDAIILPAGALHQVQNFHSC
VQVTEDFVSPEHLVQSFHLTQELRLSKEEINYDDKLQVKNILYHAVKEMVRALKIHEGEM
EDMDEN
NT seq
7581 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagacgcggccggagctggtggggaagcggttcctgtgcgtcggcggcggc
ggcgaggagccgccggagagcgggcgctggcgggccggggtcatccgcgccgtctcccag
cgggactcccacagccccgacctggcggtatatgtggaatttgatgaccttgaatgggaa
aaacgagaatgggttaaagtttatgaagattttgcaaccttcttggtagagtaccagctg
gtctgggcgaaaagaaaggacccaagccagactcagggatcaaagatcaaacaaattcaa
tggcctgcattgacattcaagcccttggttggaaaaagtgtatacaattcaattactgca
gtagaattccttgtggacaaacagctggattttataactgaagatagtgcctttcagccc
tatcaggacgacgtagacagtctaaacccagttctcagggataacccgcagttacatgag
gaggtaaaagcctgggtaaaggaacaaaaggttcaggagatttttatgcaaggtccgtac
tccttaaatggttatagggtgagagtgtacagacaggattctgccacccagtggtttact
ggtatcataactcatcatgatctcttcacccgcactatggttgttatgaatgaccaggtg
ttagaacctcagaatgttgatccttctatggttcagatgacctttctagatgatgttgtt
cactctttgttgaaaggtgaaaatattggcatcacttcacgccgacggtctcgttccaac
cagaacagcaacacagtccacggtcattatacacgtgcgcaagcaaatagtcccagacca
gcaatgaattcccaaactgcagcaccaaaacagaattctcaccagcaccagcaacagagg
aatactcggccaaataagaggaaaggctctgatagcagcatgcctgatgaagagaagatg
aaagaagaaagatatgattatataggtcgaggagaaaaccccaaaaccaaaaataaacac
ttccttagtaaaagaagaaaacctgaagaggatgaaaaaaaactaagtatgaagagattg
cggacggacaatatttcagattactctgagagcagtgactccgaaatttcaaataaaaga
ttaacagattcgccctcagagcaaaattcggaaaatgagttaaaaagcaagaacacttca
aagataaatggagaagaaggaaaatcccaagctattgagggagtagagcagacactaaca
gataggcggtctccatgggatgaaatacaggaggataaaaaacacgaagagacagaaaga
ctgaagtcatccgtcttagatcagcaggaaaaatcttcactccatgcagcagagcagcca
acaccttatgagcagaatgccaaggacccacatgttcaagagtgcaatgcagaattaaaa
aatgagcaatttgtacccagacctcctactccaaaatgtgttgttgacattactaatgaa
aacaactctgaaaaggagagccgggataatgctgcaagtacctttggcttgcaaacagtt
cagaaaatagaatctcacagcagcgatttaaagcagcaatttgcaaatgcaaatttcctt
gaagcaagaaaacaggaagctgatcaaagttgggttagcagtggtgttaaaacggatttg
atacaacctggggttgtaaaaacgttgtcagtaaatgaacacttaaatcctgaaaaagaa
aaagtgcagtatggctcgtttatgtctccgttaaatgtagcttctctagcagaagagagt
aaactgcataaacaaagtccagtccctgattctgtgaagtcaaaacctagtgcttcagtt
gatcatcctaaaacaaagtcacctgatgttaagcctaaattcacccaatcttccgatact
gtgaagtccaaggttagttcccaaaacagccatgctactggattaacaaggtcagccaat
aaaactgatcatgatttgcctaggtctagttttcatccagttccagctagagttagtgct
ctagaagctactaaaagtcctcttatcattgacaagaatgaacatttcacggtgtacagg
gaccccactctgattggacaagaaacaggaactaatcacatttcaccttatttgcatcag
cataattatcctctgcattcctcatcccaccgaacctgtttaaatccaaacgctcatcat
cctgcattaactggttcatcccatttgctagctgggtcttcagctcaggctcccttgtcc
gctattaacactcacccccttagtaccgcatctcaccattctgttcatcaccctcatcta
cttcctgcagtgttacccggagtgcctgctgcctccttgctgggtggccacccgcgacta
gagactgctcatgctagcagcttaagccatttggcattagcacaccagcagcagcaacag
atgttacaacaccagtctccacatcttctcggacaagctcatccttctgcttcctataat
cagctagggctttatccaattatttggcagtatccaaacggaacacatgcttactcagga
ctcggtctgccctcctccaaatgggtccacccagaaactcctgttaacgcagaggcttcc
ttgagaaggaatactcccagcccgtggttacaccagcctaccccggtgacctcagctgac
agccttggtttactgagtcacattcctgtgcgaccctccagtgcagatccccttcggcct
ctcaaactgacaacacattccagcccaccgttgtccaaaagtatcgtagagcatcacaaa
gaagaactggagaggaaagcatttattgaacctttacgttctgttacaactgcaccggta
aagacggagctagagcaaagcagaacgcagacagcaaaggagagccatatgcacagacat
tttgcagatccaatgttgaaccagctgccaaggccaccacaggagactggggagcgactg
agcaaatacaaagaagaacacagacggatactccaagaaagtattgaagttgctcctttt
acagctaaaataaaggcactggagggagagagagagaactactccagggtaacgtcctta
tcttcaagtcccaaaagccattcagtaaaatatgacaaagatgccgaacgctctgtgtca
gaactgtataaaatgaagcactctgttccacagagtttgccgcagagtaactatttcacc
accttgtctaacagtgtagtaaatgaaccaccaagatcgtacccgtcaaaggaagcttca
agtgtatatgttgataagcaaactaattgtccttcaacagcagctagtccccagtctctc
ccctcttacatttcttctctttcaaaacctccacctttaattaagcaccaaccagagagc
gaaggctctgcgagcaagatacccgagcagctttcacagtcggtgcagtctcactcagta
aattcttttagaagtgacagcaggagccctactcagttgtcaatctcatcttcaaataca
ctccggagtatgcctgccttgcatagagcccctgtctttcacccccctgtgcaccagaac
ctggagaagaaggaaagcagctatagcagcctttcgcctccgactctaacccctgttcaa
cctgttaatgctggtgctggcaaaatacaggagttgcagaaaccaccgactttagtacct
gagcctaaggaagctcagactgtttacaagggtgcttctgaacagaatttgtcagaagtg
tggaagtccaataatgctccaaataatgaaaaagtggattggcatgctgaaagaatgagt
ggaaagtcacagtccgctacagcatctgttattgtgcgtcctccttccagcacgaaatac
gatagcgtaccagtaatgcagtctgcttccaaagatcgagttagtgagagatcttcagct
gtgacaaatcaagcagattgcctgaaaacagcggaagccagggagactggaagaatcatt
ctgccaaatatgaactcagacagtgctcgcacacagtatgaaaagaaatttccagctgtc
tcgcaaggcagcgttcctcgtgctgtcacccccaccacaactatgatctgcagtaccaaa
atggatgtcaccgcatcagcggcaactaccaccagcgtgtcaagctggggtagttcagaa
gtgacttactccttatcgaacacggtcttggcctgcgcgccactggagtgtactacctcg
agagcggcaagtcaggcggtggcgcagacccaggaatgcaaggtcagcactcccgctccg
gttacacccgccgctggcaagacaggcagcgctgctcagcccagctcgggattctccacc
tccaccgactttgtccatttgaaaaagcacaaggcagccttggctgcggctcagtttaaa
agtagtaacaccagtgagacagagtccaactctgtgaaaaatcagacattttcaacctct
ctctccctagacagtgctatcgtctgtaatacaataaacaaagcgaactctgtaggcagt
gggcaaacttcccagacgagtcagccaaactaccacactaaactgaaaaaggcttggcta
acaaggcattcggaggaagataaaaacactaataaaaaagagaattcagggaacagtgtt
tcagaaattattaagccatgtactgtcaatttaatagcttctacatcaaatgatttgcaa
aataacatagatagtaaaatcttggtggataagttagcaaaggaagataagcaccctagg
agaaaagcaaaacgaacttacgagtctggctctgaaagtggagactctgatgaaagcgag
agcaagtcagagcaaaggactaaacggcaacccaagccaacttacaaaaagaaacaaaat
gatttgcagaaaaaaaagggtgatccagaggaagaagtaaaaccgaatggtgttcttagc
aggagtgccaaagaaaaaagcaagctgaagttacagagcggcagtaacagcactggtatc
cctcgctcagtgttaaaagattggcgcaaagtaaagaagctgaagcaaacaggagagtcc
tttttgcaggatgattcttgctctgaaataggaccaaatttgcaaaaatgcagagaatgt
agactaataagaagtaagaaaggagaagaaccaactcactcaccagtgttctgtagattt
tactactttcggagattatcttttagtaagaatggagtggttaggatagatggtttctcc
tctcctgatcaatatgatgatgaagcactgagtttatggacacatgaaaactatgaagat
gacgaactggacctagaaacttctaaatacattctagatatcataggtgataaattttgt
cagctagtgacatctgagaaaacagccatgtcctgggtgaagaaagacgccaaaattgca
tggaagagagcagtgagaggagtccgtgagatgtgtgatgcatgtgaagccacattattt
aacattcattgggtctgccaaaaatgtggatttgtggtctgcctagattgttacaaggca
aaggaaagaaaaagttctagagataaggagttatatgcctggatgaagtgtgtgaaggga
cagcctcatgatcacaaacacctgatgccaacacagattattccaggctctgttttgaca
gatcttttagatgctatgcacaatattagagaaaaatttgaaatgaaatcccattgtcag
tgctccagcaagcagagcatgcaaactggcaagctccctgcaatgaatggtgtgtctcag
gttttgcagaatgtccttaaccacagtaataagatttctctgtgcatgcctgagtctcaa
cagcagaatactcctcaaaagtccgagacaaatggtaatacaagtccaaggagcgatgta
agcacagacagcaagttaacgccacctgaatcccaatcaccgctgcattggttagctgac
cttgcagagcagaaggccagagaagaaaagaaagagaacaaagaatgtcctcctggaaaa
catgcaaaggaagagaaagaccaggataatttggaatcgccaaactgtaaaagctccccc
cctgcatcccagaacaacgagcagggctcaaccttacgagatttattaactacaacagca
ggcaaactgcgtctgggttctacagatgctggtattgcttttgctccagtttactccaca
ggaacagcaagtggcaagagtggaaggactatgccaaacattcttgatgacataattgct
tcagtagtagaaaacaagattccaccaaatagagcaccaaagataaatgtaaaatctgaa
ataaaagatgagccaaaggatgacagaaaatgtattcaggatgactgcagtaaactgtac
agtgatattcagtattcgtggatctgtgataagcatgttttgtggctcagagaccataaa
aacaacaacaactggaagctcttcaaagagtgctggaaacaaggaaggcctgttttagtg
tccggtatgcataagaaaatgaacttcagtctgtggaaagctgagtcaattagtctagat
tttggaaaccagcaagctgatatcttgaattgcaaagacagtattatttcaaacaccaat
gtcaaggaattctgggatggtttcgaagatgtttcaaaacggcagaaaataaaaaatggg
gaaacagctctactaaagctgaaagattggccttctggtgaagatttcaaggctatgatg
ccagcaagatacgaggacttattaaaaagtttacccttgcctgaatattgtagtccagaa
ggaaaactaaacttggcttctcatctgccaggattttttgtccgtccagatttgggaccc
agactatgcagtgcatatggtgtggctgctactaaagaccatgatataggaaccacaaat
ctccatattgaagtttctgatgtcgtgaacatccttgtttatgttggcatagcaaaagga
aatggagtactttccaaatcaggagttttgaagaagtttgaagaggaagatttggatgac
cttttaaggaagcggttgaaagattcaagtgaattgcctggtgctttatggcacatttat
gctggcaaagatgctgacaagataagggagtttctgcagaagatagcaaaagaacaaggc
ttagaagttttaccggagcatgatccaatacgtgatcagagttggtatgtgaacaaaaaa
cttcgccaaagacttcttgaagaatacggagtaaaaacctgtacggttattcagtttctt
ggtgatgctattatcctaccagcaggagcacttcatcaggtgcaaaattttcacagctgc
gttcaagtaactgaagactttgtgtctccagaacatcttgtacagtcatttcacttaacg
caggagctgaggctgtcaaaggaagaaatcaattatgatgataaactgcaggttaaaaat
atcttgtatcatgcagttaaagaaatggtgagagctttgaagattcatgaaggtgaaatg
gaagatatggatgaaaactaa
DBGET
integrated database retrieval system
