Grus americana (Whooping crane): 129208814
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Entry
129208814 CDS
T11359
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
game Grus americana (Whooping crane)
Pathway
game03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
game00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129208814 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
game03021
]
129208814 (TAF5)
03036 Chromosome and associated proteins [BR:
game03036
]
129208814 (TAF5)
Transcription machinery [BR:
game03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129208814 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
129208814 (TAF5)
Chromosome and associated proteins [BR:
game03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
129208814 (TAF5)
STAGA complex
129208814 (TAF5)
TFTC complex
129208814 (TAF5)
SAGA complex
129208814 (TAF5)
SLIK complex
129208814 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_VPS8
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_SPT8
Beta-prop_Nup120_160
Tricorn_2nd
PEP5_VPS11_N
CDK5RAP3
Beta-prop_ACSF4
RAB3GAP2_N
eIF2A
VPS8_N
VID27
Motif
Other DBs
NCBI-GeneID:
129208814
NCBI-ProteinID:
XP_054688139
LinkDB
All DBs
Position
7:complement(14482586..14494225)
Genome browser
AA seq
787 aa
AA seq
DB search
MAALPEEPAEVVAVKPDPEAGTSPQPPAAPPAAAAAPAAPPTAAAEGEAAGSIGEAAPPK
PAAPGPAASPAAQDRQTLLAVLQFLRRSNLRESEEILRREARLLSDDLGAAALSPAGAGL
LGALGGDGDTAGGEALLSRVTAAAAIAIGGSAATVASSSPGVAAATAVPPGKVGGGVVVE
DQPDVSAVLSAYNQQGDPTLYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVY
NQHESEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDS
YQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVF
FGLLKEPEFDVPLDDEDEEGENEEGKPKKKKPKKDSVGSKSKKQDPNAPPQNRIPLPELK
DSDKLDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADST
VRVWSVTPKKLRSVKTAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSP
DRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWA
TDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIH
SLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDN
TVRLWDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRNLLLA
AGAYSSQ
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactgcctgaggagccggcggaggtggtggcggtaaagccggaccctgaagcg
gggacgtcgccacagcctcctgctgctcctccagcagcagccgccgctcccgctgctccc
ccaaccgcggcggcggagggggaggcggcggggagcattggggaggcggcaccccctaag
cctgcggcaccgggcccggccgcctccccggcggcgcaggaccggcagacgctcctggcc
gtgctgcagttcctgcggcgcagcaacctccgcgagtctgaggagatcctgcgccgcgaa
gcccgccttctcagcgatgacctcggtgccgctgccctcagccccgccggcgccgggctt
ctgggagccctgggcggcgatggggacaccgccggcggcgaggcgctgctcagccgggtt
actgccgctgccgccatcgcgataggaggcagcgccgctactgtcgcctcttccagcccc
ggggtggccgcggccaccgccgtgccgccggggaaagttggaggaggtgttgttgtggaa
gatcagccagatgtgagcgcagtattgtctgcctacaatcaacagggggaccccacactg
tacgaggaatactacagtggattaaaacacttcattgagtgttccctggactgtcatcga
gcggaattgtctcagctgttttatcctctctttgtgcacatgtacttggaattggtctac
aatcaacatgagagtgaagcaaagtctttttttgaaagatttcatggagatcaggagtgc
tattaccaggatgacctgcgtgtattatctagcttaacaaaaaaagaacatatgaagggt
aacgagaccatgctggatttccgaacaagcaagtttgtgctgcgtatttcccgtgactct
taccaactcttgaagaggcatcttcaggaaaagcagaacaatcagatctggaacattgtt
caggaacatctttacattgatatctttgatggaatgcctcgcagtaaacaacagatagat
gctatggttggaagcttggctggggaggcaaaacgagaggctaataaagcaaaggttttc
tttggcttattgaaagaaccagagtttgatgtgcctttggatgatgaagatgaagaagga
gaaaatgaggaaggaaagccaaagaagaaaaaacctaaaaaagatagcgtagggtcaaaa
agtaaaaaacaagaccctaatgctcctccccaaaacagaattcctctgcctgaactgaaa
gactctgacaagctggataaagtaatgaatatgaaggaagctgcaaggcgtgtgcgtctt
ggcccagagtgcctgccctccatctgtttctacacattccttaatgcttaccagggtctg
actgcggtggatattacagatgactctagcatgattgtaggaggctttgctgactctact
gtcagagtgtggtctgtgactccgaaaaagctccgtagtgtgaaaacagcagcagacctc
agtcttatcgacaaagaatcagatgatgtcttggagaggatcatggatgagaaaacagca
agtgagttgaagattttatatggtcacagtggacctgtctatggcaccagcttcagtcct
gataggaactatctgttgtcctgttctgaggatggcactgttagattgtggagtctccaa
acattcacgtgtttggtgggatataaaggacacaactacccagtatgggatacacaattc
tctccttatggttattactttgtgtcagggggacacgacagagtggctcgtctgtgggca
acagatcactaccagcctttacggatatttgctggccatcttgctgatgtgacgtgtacc
cgatttcatccaaactccaactatattgccacaggctcagcagacagaactgtacggctc
tgggatgttttgaatgggaattgtgtaagaatattcactggacataagggaccaattcat
tcattggcattttctcctaatggacgattcctggctactggagcaacagatggaagagtt
ctgctgtgggatataggacatggcttgatggttggagagttgaaagggcacactgacact
atctacgcactcagattcagtagagatggggagattttagcatcaggttcaatggataac
acagttcgtctgtgggacgctgtgaaggcatttgaagatctagaaaccgatgactttact
acagccactggacatataaacttgcctgagaactcacaggacttgttactaggtacatac
atgaccaaatcaaccccagttgttcacctccattttacacgcagaaacttgctgctagct
gcgggagcctacagttcacagtga
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