Grus americana (Whooping crane): 129208944
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Entry
129208944 CDS
T11359
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
game Grus americana (Whooping crane)
Pathway
game03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
game00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129208944 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
game03019
]
129208944 (EXOSC1)
Messenger RNA biogenesis [BR:
game03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
129208944 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
129208944 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
129208944
NCBI-ProteinID:
XP_054688480
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Position
7:complement(16166746..16169367)
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AA seq
195 aa
AA seq
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MAPPARYCVPGERLCSAEEATAGSGTYTRHGFIFSSLAGCLEKRSEDSGLPVVSVVRDAE
SQLLPDVGAVVTCKVCSINSRFAKVHILYVGSTPLKSTFRGTIRREDIRATEKDKVEVYK
SFRPGDIVLAKVISLGDAQSNYLLSTAENELGVVVARSEAGVQMVPISWCEMQCPRTHTK
DFRKVARVQPQFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacccgctcggtactgcgtccccggcgagcggctgtgcagcgcggaggaggcc
acggctggcagcgggacctacacccggcacggcttcatcttctcctcactggctggttgc
ctggagaagaggagcgaggacagcgggctgcctgttgtgtcggtggtgagagacgctgag
tcccagctcctgcccgatgtgggggccgtggtgacgtgcaaggtttgcagcatcaactcc
cgctttgccaaggtgcacatcctgtatgtcggctccacgccactgaagtccaccttccgc
ggcaccataaggagagaagatattcgagccacggagaaagataaggtagaagtgtacaag
agtttccgccctggtgacatcgtcctggccaaagttatctcgctgggggatgcacagtcc
aactacctgctgagcacggcagagaacgagctgggtgtggtggtagcgcgcagcgaggca
ggcgtgcagatggtgcccatcagctggtgtgagatgcagtgcccgcggacacacaccaag
gacttccgtaaggtggcccgcgtgcagccccagtttctgcaaacctag
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