Grus americana (Whooping crane): 129209330
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Entry
129209330 CDS
T11359
Symbol
PTCH2
Name
(RefSeq) LOW QUALITY PROTEIN: protein patched homolog 2
KO
K11101
patched 2
Organism
game Grus americana (Whooping crane)
Pathway
game04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
game00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
129209330 (PTCH2)
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Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
Motif
Other DBs
NCBI-GeneID:
129209330
NCBI-ProteinID:
XP_054689594
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All DBs
Position
8:complement(25003199..25024117)
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AA seq
1432 aa
AA seq
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MGAAAAAAANGSGGGGAAPAPPAPXLPFRGAAGGRRHTALRTGPATXHHRPRRAHGGRRA
RPHITGVPSPASRPAMPAEPPRSAPPPLRAAHRKPLPEGRAVGQRAPLWLRARFQALLFA
LGCRIQRHCGKVLFVGLLVFGALAVGLRVASIETDIEHLWVEAGSRVSQELRYTKEKLGE
ESIYTSQMLIQTPKQDGENILTQEALQLHLEAALAASKVQVSLYGKSWDLNKICYKSGVP
IIENGMIERMIEKLFPCVILTPLDCFWEGAKLQGGSAYLPGRPDIQWSNLDPLQLMEELG
QFTSLEGFKELLDKAEVGQAYMERPCLDPRDPQCPPSAPNKQSQQSPDIPAELSGGCHGF
SRKFMRWQEELILGGTTKDSQGKLLRAEALQTMFLLMSPRQLFEHFKDDYEIHDISWSEE
KAGAILEAWQRKFVELAQDSIPPNATQSVHAFSTTTLNDIMKSFSDVSAIRVAGGYLLML
AYACVTMLRWDCSKSQGAVGLAGVLLVALSVASGLGLCSLLGISFNAATTQVLPFLALGI
GVDDMFLLAHAFTETSQHIPFKERTGECLKRTGTSVALTSVSNMIAFFMAALVPIPALRA
FSLQAAVVVVFNFAMVLFVFPAILSLDLHRREKHRLDILCCFYSPCSSRVIQIQPQELAD
ANDNHACHPSPYGHPSMATSTQITTTVQAFTRCDPSGHHVVTVLPPTSQVCTSPAVLLPP
TDPLGSQVFAPSSSTRDLLAQLDEAKGGRECVPLPFCRWSLADFAREKYAPLLLRTRTKA
VVAVLFLALLGLSLYGTTMVHDGLYLTDIVPRDTKAHAFISAQFKYFSFYNMFIVTKGGF
HYPGAQAALLSLHQAFSTVKYVVREGNQDLPKMWLHYFQDWLRGLQATFDRDWQAGRITH
DSYRNGSEDGALAYKLLIQTGNKKEPFNFNQLTTRRLVDENGIIPPDTFYICLTVWASND
PLGFAASQANFYPPPPEWIHDKYDTTGENLRIPAAQPLEFAQFPFYLSGLRRTADFVEAI
ESVRAICREAAQRHGVLSYPSGYPFLFWEQYIGLRHWFLLAISILLACTFLVCALLLLNP
WTAGIIVSILAMMAVELFGIMGLMGIKLSAIPVVILIASVGIGVEFTVHVALGFLTAAGS
RNVRSAAALEHTFAPVMDGAISTLLGVLMLAGSEFDFIMRYFFAVLTILTLLGLLNGLVL
LPVLLSVIGPPPEASPVDNGPRLPPPEPVPLCLGPGGLYVRRAPAWPAAFPDPSDMEHYA
EGVEQGSPRGPFIVPPAPAHILLEAGKDPSFPRITVLKPYKDSPEVQGKKEATGPQPTAP
LPFGEPCPVPPQDYLQPCPPGTRPAPPAALPTYSTHLQGPVGSYATVTATASVTVALHPT
LPGSYPNFGPEGFTSSERDCLEEPGVPSAGGTAVPDTFEMQSLGRRGAGARC
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgggcgctgccgcggcggcggcggccaatgggagcggcggcggcggcgcggccccggcg
ccccccgcccccngcctcccctttagaggcgcggcgggcggccggcggcacacagccctc
cgcaccggccccgctaccnggcaccaccggccccgccgcgcgcatgggggccgccgcgct
cggccccacataacgggggtgcccagccccgccagtcgccccgccatgccggccgagccc
ccccgctccgcgccgccgccgctccgcgccgcccaccgcaagccgctgcccgagggcagg
gccgtgggccagagggccccgctgtggttgcgggcccgctttcaggcgctgctcttcgcc
ctgggctgccggatccagcggcactgcgggaaggtgctcttcgtggggctgctggtgttc
ggggcgttggccgtggggctgcgggtggcctccatcgagaccgacatcgagcacctctgg
gtggaagcgggcagccgggtgagccaggagctacgctacaccaaggagaagctgggtgag
gagtccatctacacctcccaaatgttgatccagaccccaaagcaggatggggagaacatc
ctgacgcaggaggccctgcagctccacctcgaggcggccctggccgccagcaaagtccaa
gtctcgctgtacggaaaatcgtgggatttgaacaagatctgctacaagtcgggtgtcccc
atcattgagaatggcatgattgagaggatgatagagaagctgttcccctgcgtgattctg
acaccactggattgcttctgggaaggcgccaagctgcagggaggctcagcctacctcccg
ggccgcccagacatccagtggagcaacctggaccctctgcagctgatggaggagctgggg
cagttcacgtccctggaaggcttcaaagagctgctggataaggcagaggtggggcaggct
tacatggagcggccctgcctggacccccgggaccctcagtgcccccccagtgcccccaac
aagcagagccagcagagccccgacatcccggccgagctctcggggggctgccacggcttc
tccaggaagttcatgcgctggcaggaggagctgattttaggtggcacaaccaaagactcc
cagggcaagctgctacgtgccgaggccctgcagaccatgttcctcctcatgagcccccgg
cagctctttgagcacttcaaggatgactatgagatccatgacatcagctggagcgaggag
aaggcgggtgccatcctggaggcctggcagaggaaattcgtggagctggcacaggactcc
atcccacccaatgccacgcagagtgtccacgctttctccaccaccacgctcaacgacatc
atgaagtccttctctgatgtcagcgccatccgtgtggctgggggctacctcctcatgctg
gcctacgcctgtgtcaccatgctgcggtgggactgctccaagtcccaaggggccgtgggc
ctggctggggtcctgcttgtggctctctccgtggcctctggcctggggctttgctcactg
ctgggcatctccttcaacgcagccaccacccaggtcctgcccttcctggccctcggcatc
ggtgtggatgacatgttcctcttggctcacgccttcaccgagaccagccagcacatcccc
ttcaaggagcggacgggcgagtgcctgaagcgcaccgggaccagcgtggctctcacctct
gtcagcaacatgattgccttcttcatggcagccctggtgcccattcctgccctgcgcgcc
ttctccctccaggctgcggtggttgtggtgttcaactttgccatggtgctattcgtcttc
cctgccatcctgagcctggacctgcaccgccgggagaaacaccggctcgacatcctctgc
tgcttctacagcccttgctcctcgcgggtcatccagatccaaccccaggagctcgccgac
gccaacgacaaccacgcctgccacccgtccccttatgggcaccccagcatggccaccagc
acccagatcaccaccactgtgcaagcattcacccggtgcgacccctcaggtcaccacgtc
gtcaccgtcctgccgcccacctcccaggtgtgcacctcgcccgccgtcctcctgcccccc
accgaccccctgggctcgcaggtcttcgccccgtccagctccacccgggacctgctggcc
cagctggacgaggccaagggcgggcgggagtgcgtccccctgcccttctgccgctggagc
ctcgccgactttgcccgggagaagtatgccccgctgctcctgcggacccggactaaggca
gtggtggcagtgctgttcctggcacttctggggctgagcctctacggcaccaccatggtg
cacgacggtctctacctgacggacattgtgccgcgggacaccaaggcgcatgccttcatc
tcggcccagttcaagtacttctccttctacaacatgttcatcgtcaccaagggtggcttc
cattacccgggcgcccaagctgccctgctcagcctgcaccaggccttcagcaccgtgaag
tatgtggtgcgggagggcaaccaagacctacccaagatgtggctccactacttccaggac
tggctgcgagggctccaggccaccttcgacagggactggcaagccgggcgcatcacccat
gacagctaccgcaatggctctgaggacggggcgctggcgtacaagctcctcatccagact
ggcaacaagaaggagcccttcaacttcaatcagctgaccacgcggcggctggtggatgag
aacggcatcatcccccctgacaccttttacatctgcctgacggtgtgggccagcaacgac
cccctgggcttcgccgcctcccaggccaacttctaccccccaccgcccgagtggatccat
gacaagtacgacaccacgggcgagaacctgcgaattccagcagcccagccgctggagttc
gcccagttccccttctacctgagcggtctgcgtcgcacggccgacttcgtggaggcgatt
gagagtgtgcgggccatctgccgggaggctgcccagcgccacggggtgctgagctacccc
agcggctaccccttcctcttctgggagcagtacatcggcctgcgccactggttcctgctg
gccatcagcatcctgctggcctgcaccttccttgtctgcgccttgctgctgctcaacccc
tggacagccggcatcatcgtctccatcctggccatgatggcagtggagctgtttggcatc
atggggctgatgggcatcaagctaagcgccatccccgtggtcatcctcatcgcctcagtg
ggcatcggtgtggagttcactgtccacgtggctctgggcttcctgacggctgcagggagc
aggaatgtgcgctcggccgcagcactggagcacacctttgcccccgtgatggatggtgcc
atctccaccctcctgggagtcctcatgttggctggctctgagtttgacttcatcatgagg
tacttctttgcggtgctcaccatcctgacgctgctggggctgctcaacgggctggtgctg
ctgcccgtcctgctctctgtcattgggccaccccccgaggcatccccggtggataatggc
ccccgtctgccccctccggagccagtgcccctgtgcctgggccctggggggctgtatgtc
cggcgtgccccagcctggcctgccgcattccctgacccctcggacatggagcactacgca
gagggtgtggagcagggcagcccccggggacccttcatcgtgccccctgccccggcacac
atcctgctggaggctggcaaggaccccagcttcccccgcatcaccgtgctgaagccctac
aaggacagcccagaagtccagggaaagaaggaggctaccggcccgcagcccacagccccc
ctaccctttggggagccgtgccccgtgccaccccaagattacctgcagccctgtccaccg
ggcacccggccagccccccctgcagccctgcccacctacagcacccacctgcagggtccc
gtcggcagctacgccaccgtcacggccactgcttcggtgacggtggccctgcaccctaca
ctgcccggctcctaccccaacttcggccccgagggcttcaccagcagtgagcgggactgc
ctggaggagcctggcgtgcccagtgccggcggcactgctgtgcccgacaccttcgagatg
cagagcttgggacgccgtggggcaggcgcacggtgttag
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