Grus americana (Whooping crane): 129209431
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Entry
129209431 CDS
T11359
Symbol
ATG4C
Name
(RefSeq) cysteine protease ATG4C
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
game Grus americana (Whooping crane)
Pathway
game04136
Autophagy - other
game04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
game00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129209431 (ATG4C)
04136 Autophagy - other
129209431 (ATG4C)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
game01002
]
129209431 (ATG4C)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
game04131
]
129209431 (ATG4C)
03029 Mitochondrial biogenesis [BR:
game03029
]
129209431 (ATG4C)
Peptidases and inhibitors [BR:
game01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
129209431 (ATG4C)
Membrane trafficking [BR:
game04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
129209431 (ATG4C)
Mitochondrial biogenesis [BR:
game03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
129209431 (ATG4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129209431
NCBI-ProteinID:
XP_054689792
LinkDB
All DBs
Position
8:33130410..33157884
Genome browser
AA seq
459 aa
AA seq
DB search
MEATGTDEVEKIKSKFMSAWHNMKYSWVLKTKTYFSRNSPVFLLGKCYHFKTDESGELSS
DGSNCDKINTEISGNVEEFRKDFISRIWLTYREEFPQIKGSALTTDCGWGCTLRTGQMLL
AQGLMLHFLGRAWVWPDALDIDNSDSESWTAHTVKKLTASFETSLTAEREPKILSNHHQG
TIRRNCDNNEMRNEVYHRKIISWFGDSPLAAFGLHQLIEYGKKSGKIAGDWYGPAVVAHI
LRKAVEEARDPELQGVTVYVAQDCTVYSSDVIDRQCSFMDSGKADTKAVIILVPVRLGGE
RTNMDYLEFVKGILSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDF
PLESFHCPSPKKMSFKKMDPSCTIGFYCRTVQDFEKASEEITKMLKSSSKEKYPLFTFVK
GHSKDYDFASSPLHEENDLFSEDEKKRLKRFSTEEFVLL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggaggccacagggacagatgaagtagaaaagataaaatcaaagtttatgtcggcatgg
cacaacatgaaatacagttgggtgttgaaaacaaaaacttacttcagtagaaactctcca
gtctttctgctgggaaaatgttaccacttcaaaactgatgaatctggtgaactctcttca
gatgggtccaattgtgataaaatcaacacggagatttcaggaaatgttgaggagtttcgt
aaagattttatttctagaatatggctgacttacagagaggaatttcctcagataaagggg
tctgcattaacaacagactgtggctggggttgcacactgagaactggtcaaatgctgctg
gctcaaggtcttatgcttcattttctcggtagagcctgggtctggccagatgcgttggat
attgacaattcagattctgaatcatggacagcccatacagtgaaaaagctgacagcatca
ttcgaaacatcgctcacagcagaaagagaacccaagatcctgtcaaatcatcatcaggga
acaataaggaggaactgtgataacaatgaaatgagaaatgaagtttatcatagaaaaata
atttcttggtttggcgactctccactggcagcttttggcttgcaccagctaatagagtat
ggaaagaagtctggaaaaattgctggagattggtatgggcctgcagttgttgcacacatt
ttaagaaaagctgttgaagaagcaagagaccctgagctacaaggagtaacagtctatgtt
gctcaggattgtacagtctacagttcagatgttattgacagacagtgttcttttatggac
tctggaaaagcagacacaaaagctgtaattatattagttcctgtgagactcggtggagag
agaacaaacatggactacttagagtttgtaaagggaattttaagccttgaatattgtgtt
ggtattattggtggcaaacccaagcagtcatattactttgctggatttcaagatgacagt
ttgatttacatggatcctcattactgccaatcttttgtagatgtcagcataaaggatttc
cctcttgagtcattccactgtccttctcccaaaaagatgtcattcaaaaaaatggatccg
agctgcacaataggattttattgtagaactgtgcaggactttgagaaggcttctgaagaa
ataacgaagatgctgaaatcttcatctaaggagaaatatcccttgtttacttttgtaaag
ggtcattctaaagactatgactttgcttccagtccactccatgaagaaaatgaccttttc
tctgaggatgaaaagaaaagattaaaaagatttagtacagaggagtttgtcttgctttaa
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