Grus americana (Whooping crane): 129211242
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Entry
129211242 CDS
T11359
Symbol
DCAF1
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
game Grus americana (Whooping crane)
Brite
KEGG Orthology (KO) [BR:
game00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
game01001
]
129211242 (DCAF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
game04121
]
129211242 (DCAF1)
Enzymes [BR:
game01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
129211242 (DCAF1)
Protein kinases [BR:
game01001
]
Serine/threonine kinases: Other
Other
129211242 (DCAF1)
Ubiquitin system [BR:
game04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
129211242 (DCAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
WDR55
ANAPC4_WD40
LisH
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
129211242
NCBI-ProteinID:
XP_054693985
LinkDB
All DBs
Position
11:complement(19389752..19444599)
Genome browser
AA seq
1505 aa
AA seq
DB search
MTSGSGHVDSKAELTALLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYATGLLGGAMENQDIAANYRDENSQLVALVLRRLR
ELQVTEMTTKQENKRPSPRKVPSDPLLPLDEEAVDMDYGEMAVDGEQEEVSGDMEISFHL
DSSHKTSSRVNSAAKLDDGGLRKSKSGKQHERDGFRKAKQKLGFSTSEPERMFVELSNSS
WSEMSPWVIGTNYTLYPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMYYIDLK
RTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYN
QDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGL
RRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRRYFEAHLAIKLEQVKQSL
QRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLMLQL
ISIACNWKTYYARNDTVRYALDVLAILTVVPKIQLQLAEPVDVLDEAGSTVSTVGISIIL
GVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQAPKSSEHTLA
KMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSS
CQIQQLMKEPVLQDKRSEHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRI
TFPEKELLLLIRNHLISKGLGETASVLTKEADLPMTAASHSSAFTPVAAAASPVTLPRTP
RIANGISARLSSHTSVGSTTTSVHAQARPSASQGPLALPGPSYASNSPLIGRISFVRERP
SPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVA
TCPPFSLFTPHQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPIS
VFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPS
RDGSLLLTSATWSQPLSALWGMKSVFDMKHSFPDDHYVEFSKHSQDRVIGTKGDIAHIYD
IQTGNKLLTLFNPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISG
VFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRVVFNYTGTVMYGAMLQADDEDDLLEE
RMRSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDSKDCYLAVIENQGSMDAMNMDTVC
RLYEVGRQRLAEDEEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDENN
ENAGEDGENDFSPSDDEELANLLEEGDEGEDEDSDADEEVELILGDTDSSDNSDLEDDII
LSLNE
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaggatctgggcatgtggactccaaggctgagctcactgctttgcttgagcaa
tgggagaaagaacatggcagcgggcaagacatggtccctattctcaccagaatgtctgag
ctgattgagaaggagactgaagaataccgcaaaggggatccagacccatttgatgaccga
cacccaggtcgagcggacccagagtgcatgcttggtcacctactgaggatacttttcaag
aatgatgatttcatgaatgcgctagtgaatgcttatgtgatgacaagcagagaacctcca
ttaaacactgctgcctgccgacttcttctggatatcatgccgggactggaaacagctgtt
gtctttcaggaaaaggaaggcatagttgaaaatctctttaagtgggcgcgagaggctgat
cagccgctaaggacatacgcaacgggactattaggaggagctatggaaaaccaagatatt
gcagcaaattacagggacgagaactcgcaattggtggctttggtgcttcgacggctacga
gagttacaggttactgaaatgactacaaaacaagaaaacaagcgtcccagtcctcggaaa
gtgccatcagatcctctgctgcctctagatgaagaggctgtggatatggattatggggag
atggcagtagatggagagcaagaggaagtttctggggacatggagatctcctttcatctt
gattcaagtcacaagacgagtagcagagtaaactctgctgcaaagctagatgatggggga
ctgaggaaaagcaaatcaggcaaacagcacgaacgagacggctttcgaaaggccaaacaa
aaattgggcttctccacttcagaaccagagcggatgtttgttgaactgtccaacagcagc
tggtcagaaatgtccccatgggtgattggcactaattacaccctttaccctttgactcct
gccatagagcagaggctaattcttcagtacctgactcccttaggggagtaccaagagcta
ctacccatctttatgcaactgggatcaagggagctgatgatgtactacattgatttgaag
cgaaccaacgatgtgctgctcacttttgaagcccttaagcatttggcatcattgctgctg
cacaacaaatttgcaacagagtttgttgctcatggaggagtgcaaaagttgctggagatt
cctcgtccttccatggcagccacgggggtctccatgtgcttgtattatttgtcttacaat
caagatgccatggagagggtgtgcatgcacccgcataatgtgctttcagatgtagtaaac
tacaccttatggctaatggagtgttcccatgcctcaggctgctgccatgctaccatgttc
ttctccatttgcttctccttccgtgctgtcctggagctctttgacaggcatgatggcctt
cgacgtctggttaacctgataagcactcttgagatcttaaacctggaagaccaaggagcc
ctcctgagtgatgatgagatctttgccagtcgccagactgggaaacacacgtgcatggcc
ttgcgtagatactttgaggctcaccttgctatcaaacttgaacaggtgaagcagtcactc
cagcgtactgaaggtggcattcttgtccatccgcagcccccctacaaggcctgttcatat
actcatgagcagattgtagagatgatggagttcctgattgagtatggtccagcacagctt
tactgggagccagcagaggtttttctcaaattgtcttgcgtccaactcatgcttcagctc
atttcaatagcgtgcaactggaagacgtactatgcaaggaatgacacagtacgatacgct
ttggatgtactagccatcctgactgtggtccctaaaatccagttgcagctggcagaacct
gtggatgtgttagatgaagctggatctactgtttccactgtgggtattagtatcatcctt
ggagttgctgagggtgagtttttcatccatgatgcagagattcagaaatcagcccttcag
atcatcatcaattgtgtatgtggcccagataatcggatctccagtattggcaaattcatc
tctggaactcctcggcgaaagcttcctcaggcccccaagagcagtgagcacacgttagct
aagatgtggaatgtggtacagtccaacaatggcatcaaagtgctgctgtcattgctgtct
ataaagatgccaatcacagacgcagatcagatccgagcattagcctgcaaagccttggtg
gggctctcgcgcagcagtactgtccggcagattatcagcaagctccccctcttcagcagc
tgtcaaattcagcagctgatgaaagagccggtgcttcaggacaagcgcagtgagcatgtg
aaattctgcaaatatgctgctgaactgatagagcgtgtctcggggaagcctttgctcatt
ggcacagatgtctctctggctcggctgcagaaagcggatgtggtggcccagtcaaggatc
acgtttcctgagaaggagctgctgctcctgattcggaaccatctcatctctaagggccta
ggagaaaccgcatctgtccttactaaagaggctgacctacccatgactgcagcatctcat
tcatctgccttcacccctgttgcggctgctgcctctcctgtgaccctgcctcgcactcct
cgcatagctaacggcatctcagcccgtttgagtagccacacttctgtaggttccactacc
acctctgtccatgctcaggcaaggccgtctgcatcccaaggtccacttgcccttccaggc
ccttcttatgccagcaactctcctctgattggcaggattagctttgtcagggagaggcca
tctccctgtaacggcagaaaaatcagagtgttgcgacaaaaatcggaccatggcgcctac
agccagagcccagctatcaaaaagcagctggacagacaccttccttccccacccacgctg
gacagtataatcacagagtaccttagggagcagcatgcccgctgcaagaaccctgttgcc
acctgtccccctttctctctctttactccccaccagtgtcctgagccaaaacagaggcgc
caagcgccaactaactttacctcacggctgacccgcagggcagcctttccgaagtacgga
ggggtggatggtggctgctttgatagacaccttatatttagcaggttccgtccgatttct
gtgttcagggaagcaaatgaggatgagagtggcttcacctgttgtgcgttttctgcaaga
gaacgattcttaatgctgggtacttgcacgggacagttgaaactctataatgtatttagc
ggacaggaagaggccagttacaactgccataactctgccatcacgcaccttgagccatcc
agggatggatctttattgctgacatctgctacgtggagccaacctctgtctgcattgtgg
ggaatgaagtctgtctttgatatgaagcattccttccctgatgaccactatgtggagttc
agcaagcactctcaggatagggtcattggcacaaaaggagacattgcccatatctatgat
attcagactggcaacaagctattgactctgtttaacccagatcttgccaacaactacaag
aagaactgtgccacctttaaccccactgatgaccttgtcctaaatgacggtgtcctctgg
gatgtcagatcggcacaagccatccacaagtttgacaaattcaacatgaccatcagtggt
gttttccatcccaatgggctagaggtcatagtcaacacagaaatttgggacctccgaact
ttccatttgttacacacagtacctgcactggatcagtgtcgtgtggtcttcaactatact
ggcacagttatgtatggagctatgttgcaggcagatgatgaagatgaccttctggaggag
agaatgagaagtccctttggctcttctttcaggacatttaatgcaactgattataaacct
atagctaccatagatgtaaagcggaatatctttgacttgtgcacagacagcaaggactgc
tatctggctgtcattgagaatcaagggagcatggatgccatgaacatggatacagtttgc
agactgtatgaagtgggcaggcagcgtttggcagaagatgaagaggatgaagaagaggat
caggaggaagaagagcaagaggaagaagatgatgatgaagatgatgatgatacagatgac
cttgatgaactagatacggaccagctgctggaggctgagctggaggaggatgagaacaat
gagaatgccggtgaggatggagaaaatgacttttctccctccgatgatgaggagcttgcc
aacctcctggaagagggagatgagggtgaagatgaagattctgatgctgatgaggaagtt
gagctgattcttggagataccgacagctcagataactctgacttggaggacgacataatc
ctgtctctgaatgagtga
DBGET
integrated database retrieval system
