Grus americana (Whooping crane): 129211650
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Entry
129211650 CDS
T11359
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
game Grus americana (Whooping crane)
Pathway
game03013
Nucleocytoplasmic transport
game03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
game00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129211650 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
129211650 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
game03019
]
129211650 (THOC2)
03041 Spliceosome [BR:
game03041
]
129211650 (THOC2)
Messenger RNA biogenesis [BR:
game03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
129211650 (THOC2)
Spliceosome [BR:
game03041
]
Complex C
Other components
EJC/TREX
129211650 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129211650 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
129211650
NCBI-ProteinID:
XP_054695040
LinkDB
All DBs
Position
12:complement(17727380..17783378)
Genome browser
AA seq
1608 aa
AA seq
DB search
MAALLPAEWIKNWEKGGKNEFVQLCRTLSENKSHDNIGFRDIQQALYELAYHVVRGNLKH
DQASNVLGDVIEFREDMPSILADVFCILDIETSCLEEKSKRDHFTQLVLACLYLVSDTVL
KERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDL
SGNVTSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQT
LCHILGFKFKFYQDPSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREI
VEAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHAQS
IMDQMPPFYATSHKPIAIALCQLVHVTIEPLYRRVGVPKGAKGSPISSLPNKRAPKQADS
FEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEVGTVKKFVSDRVVKFQSDGSK
QEDKEKMEILFSCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKN
ETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQK
YDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAV
FRKYPIELAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEITMEQLEAMTGGEQL
KAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKL
YDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSK
YDELKKAEKGNKQQHKVHKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYATFWSLTM
YDLAVPHSSYDREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHV
QRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTP
NFSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPG
FLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTK
ILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMIPENEFHHK
DPPARNAVAATVQNGPGGAGMPTSVTINTVRLEEGTPEETDKLKEKSQGVVKVMNKAVNA
TPKVTTSNGNSASNSKIIKEKDDKEKSGKEKDKEKKDKTPAATPEMKALGKDGKDKPKEE
RANKDDKAREIKEKTPKSDKEKEKVKKEEKASKEEKSKTVVTIIESKSTAEKEREKEPSR
ERDVAKEMKSKENAKGGEKMPVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSSTVK
DNLNELKDSSAKHYINHTTPTLSKSKEREVDKKDLDKSRERSREREKKDEKDRKDRKRDH
SNSDREVPQDSTKRRKEENGTTGSSKHSKSESPSDSPRLNEKEKEKNKSKSSGKEKGDSI
KAEKMEKSSSGSKKESRHDKEKTEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctccctgccgagtggataaagaattgggagaaagggggcaagaacgag
tttgtgcaattatgtcgcactctcagtgaaaacaaaagccatgataatatcggtttcaga
gatatccaacaggctttgtatgagcttgcataccatgttgtcagaggaaacttaaagcat
gatcaagcctccaatgttcttggtgatgtcatagaatttcgggaagacatgccttccatc
ctagctgacgtattctgcatattagatattgaaacaagttgtttagaagaaaaaagtaag
agggatcactttacccaactggtattagcctgtttgtaccttgtatctgacactgtccta
aaggagcgtttagacccagagacactggagtcattaggacttatcaagcagtctcaacaa
ttcaatcagaaatctgttaaaataaagacaaaactattttataagcaacagaagtttaat
ttgttaagagaggagaatgaaggttatgcaaagctcattgcagaactggggcaagactta
tctggaaatgtcactagtgacttaatccttgaaaatatcaaatctttaataggatgtttt
aaccttgatcctaacagagttttggatattatcctagaagtctatgagtgcaggcctgag
tatgacgacttctttgtaccactgatagagtcttacatgtacatgtgtgaacctcaaact
ctatgccatatccttgggttcaaattcaaattttatcaggatccgagtggtgagacacct
tcctccttatacagagttgctgctgtccttttgcagcataatctcatagatttggaagat
ctttatgttcatcttcttccgggggataatgccatcattgaggaacacaagcgagagata
gtggaagctaagcaaattgtcagaaaacttactatggttgtcttatcctctgaaaagact
gaggaaaaggagaaggaaaaagaaaaagaggaggagaaaaccgaaaagcctcctgataat
cagaagcttggtttgttggaagctttattaaaaattggtgattggcagcatgcacaaagt
attatggatcagatgcctccgttttatgctacttcacacaagcctattgcaattgccctt
tgccagcttgtacatgtgacaattgaacctctgtaccgcagagttggtgtacctaaagga
gctaaagggtcaccaatttcctctttgccaaacaagcgagcaccaaaacaagcagatagt
tttgaggacttgagaaaagaagtgttcaacatgctttgttaccttggtcctcatctctcc
catgatcccattttatttgcaaaagtggtgcgccttggaaaagcatttatgaaagaggtt
ggaactgtgaagaaattcgtcagtgacagagtggttaagtttcagtctgatggaagcaaa
caagaagataaagagaaaatggagatactgtttagctgtttgttgagtattaccgatcaa
gtcttacttccatctctttctttgatggactgcaatgcatgcatgtctgaagaattatgg
ggaatgttcaaaacttttccataccagtaccggtaccgtctgtatgggcaatggaagaat
gaaacgtacaacagtcacccgcttctcgtgaaagttaaagctcaaaccatagaccgagcc
aaatatataatgaagcgcttaacaaaggaaaatgtgaaaccctctggaagacaaattggg
aagctcagccacagcaatcctacaattttatttgattatattttatcacaaatacaaaaa
tacgataacttaataactccggttgttgattcactgaaatacctcacttcactgaactac
gatgtcttggcatactgtatcattgaagctctggcaaacccggagaaggagagaatgaag
catgatgacactacaatctcgagctggctgcagagtctggctagcttttgtggtgcagtt
ttccgaaaatacccaattgagcttgctggtctacttcagtatgtagccaaccaactgaaa
gctgggaaaagctttgatttgcttattttaaaagaggtagtacagaaaatggcagggata
gagattacagaagaaattacaatggaacaattggaagccatgactggtggagagcaactg
aaagctgagggtggatactttggccaaatcaggaatacaaaaaaatcttctcagagattg
aaagatgcattattggaccatgatcttgcccttccactgtgcctgctgatggctcaacag
agaaatggtgtgatctttcaagagggaggggaaaaacatctgaagctggtgggaaaactg
tatgatcagtgccatgacactctggtacaatttggtggatttttagcatccaatctaagc
acagaggattacattaagcgagtgccttctattgacgttctctgtaatgagtttcacaca
cctcatgatgctgcatttttcctctcaagacccatgtatgcgcaccatatttcatcaaaa
tatgatgaactgaaaaaagctgagaagggaaataaacagcagcacaaagttcacaaatac
attacatcatgtgagctggtgatggctcctgttcatgatgctgtgatttctctgcacctt
cccaaggtttgggatgacatcagtcctcagttttatgctacattctggtctctgacaatg
tatgaccttgctgtcccacatagtagctatgacagagaagttaataaacttaaagtccag
atgaaagccatagatgacaatcaggaaatgcctccaaataaaaagaaaaaagaaaaagaa
cgttgcacagctcttcaggacaagctgcttgaagaggagaagaagcagttggagcatgtg
cagagggttctacagagactgaaactagagaaggataactggcttctggcaaagtctacc
aaaaatgagactatcacaaaatttttgcagttatgcatatttcctcgatgcattttttcg
gcaatcgatgcagtttattgtgctcactttgtagaactggtgcatcagcagaaaacaccc
aacttctccacgcttctctgctatgacagagttttctctgatattatatatacagttgca
agttgcactgaaaatgaagctagtagatatggcaggtttttatgctgtatgctggagact
gtgactagatggcacagtgacagagtcatatatgaaaaggaatgcggcaactatccaggc
ttcctaactatattacgagcaactggatttgatggtggaaataaagctgatcaattggat
tatgagaattttagacatgtggtacacaaatggcactataaattaactaaggcttctgtg
cactgccttgagacaggtgaatatacacatatcagaaatatcctgattgtgctgaccaaa
atccttccatggtatccaaaagtgctgaacctgggccaagccttggaaagaagagtacat
aagatatgtcaggaagagaaagagaagagacctgatctatatgcattggctatgggctat
tctgggcagttgaaaagtaggaagcctttcatgatacctgaaaatgagttccaccacaaa
gacccacctgccaggaatgctgtagctgcaacagtacaaaatgggccaggtggtgctggg
atgcctacgtctgtcacaataaatacagttagactggaagaaggcactcctgaggagact
gataaactaaaggagaagtctcagggtgtggtgaaagttatgaataaagctgtcaatgct
acaccaaaggtgacaacgagcaatggaaacagtgcttctaatagcaaaattattaaggag
aaagatgataaagaaaaaagtgggaaggaaaaagataaagaaaaaaaagacaagactcca
gctgccactccagagatgaaggcacttgggaaggatgggaaagataaaccaaaggaagag
cgggcaaacaaagatgataaagcaagagagatcaaggagaaaacgccaaaatctgacaaa
gagaaggaaaaagtcaagaaagaagaaaaagcttcaaaagaagaaaaatccaagacagtt
gttaccatcatcgaatcaaagtcaactgcagaaaaggagagagaaaaggagccatccaga
gaaagagatgtagcgaaggaaatgaaatccaaggaaaatgctaaaggaggagaaaagatg
ccagtagctgggtccttgaagtcacctgttccccgatcagaaacatcagaatctgaaagg
gaacaaaaacgccgcaaagttgatacacattcttctccatcacattcctcaacagtaaag
gacaacctcaacgaactcaaggactcttcagcaaagcactacattaaccacactactcca
acactgtccaagagtaaggagagagaagtggacaagaaagatttggacaagtcaagggaa
agatccagagagagagagaagaaagatgaaaaggacaggaaagatcgaaaaagggatcat
tcaaacagtgaccgagaggtaccacaggattcaactaagcgacgcaaagaggaaaatggg
acaactggttcttcaaaacatagtaaaagtgaaagtccttctgattcccctcgcttaaat
gaaaaggagaaggagaagaacaaatcaaaatcttcaggaaaagagaaaggtgattcaatt
aaggcagaaaagatggaaaagagctcctctggtagcaaaaaggaatcaaggcatgataag
gaaaaaacagaaaagaaagaaaaacgagacagtactggagggaaagaggaaaagaaacat
cataaatcttcagacaagcatagataa
DBGET
integrated database retrieval system
