Grus americana (Whooping crane): 129212015
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Entry
129212015 CDS
T11359
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
game Grus americana (Whooping crane)
Pathway
game04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
game00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129212015 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
game03000
]
129212015 (ATRX)
03036 Chromosome and associated proteins [BR:
game03036
]
129212015 (ATRX)
Transcription factors [BR:
game03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
129212015 (ATRX)
Chromosome and associated proteins [BR:
game03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
129212015 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129212015
NCBI-ProteinID:
XP_054695955
LinkDB
All DBs
Position
12:20868047..20952246
Genome browser
AA seq
2446 aa
AA seq
DB search
MTAEPVSESKLNTLVQKLHDFLAHSSEESEDANSPPALSKNKTIGKSREPKSSPSSMENN
REEGSSSSERTKSLGSSRSKRKPTIVTKYVGSDDEQILDETVNEDISNENSENDVDMKSL
PKGTVVVQPEPVLNEDKDDFKGPEFRSRNTVKMKPEAPKKRGEEGLHGIVSCTACGQQVN
HFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAF
CKKCILRNLGRKELSTILDENNQWHCYVCHPEPLLDLVTACDSVFENLEQLLQQNKKKIR
VESEKSKIYDHTVKFSPKRNNSNCNGEEKKLDDSYSGSLTYSYKALMVPKDLLKKTKKLV
ETTANLNSSFVSFLKNAAENVEISPTVQLCQLKAFKSVLSDMKKAHLALEEGLNLEIQAL
NVKIKDKITKEKKPDIRSEKNEVKKDEGKEHVALKEDDAVKTQKKVVSERPEGEPMDQSV
PAMEQTDNKRTSGEDKKSGRNEEPQYEPNSTEALDMDIVSVPSSVPEDIFETLESAMEIQ
ITSDEQDSGNTGTDHETLNSNTKSNAPLKDTKGGSKLKSSAKGTKELIVKLTPVSLSEST
IKAEDQDSSLEKGSKDVDVTPKAENCDSVKQNHNAGSEPSTENETVSLVEESDLRRSPRV
KTTPLRRQTDISPLTSNSEEDSNDTCNEKRKRKSSKQPRRKNDKRNSSDSTVDGPSPNKL
SKSKKPYVLDHSSDSDEMPAVLKEVAMMSHSSSDIDSNSEAPTNDQKTLNFLKNQPVKDE
NGKRKRKSSSSGSDLDAKRGKSAKNSAAAKKKRQNYSDSSNYDSELEKEIKILSKIESAK
KAKKKYSRKDDSYDSSEEEQRKKVSSKRKINLKKQREKSSEDDDVEKSSPEKEINHSSKD
KKMGKGSAAKEKINRDSKEKTVKGKQDESSDVEKSLLEKEESSPKGAKLTEVKKSKDLKK
KKAQEDSSSESTEKSAKKEHNFDSSKDRFKNKKGSESKAKKSEKLKKKSYKKEQDDSSSD
IEKSSPEKGSCNSSENDKTKNEPVFKEKKRRNLRERVSKKVHIDLSSDAEKSPLKEESSS
EDAVQSKKRTETKEKKKTSHKKKIPKKEQNDSSSSDEESYEDSKKKIKRGSMKESKKSNL
KKKVSKKKAVVTSSSSSDKDENDEQNSTGDGSSDEQKIMPVTENLMLSADTGFCQSSGDE
GETKSRAVPMEEEEDDDDDDPENRIAKKMLLEEIKANLSSDENASSDDESDEGKKKTGKQ
NENTGDDGEHQKAPGKKWCCSARRNFKEVNEKEDNSESDSEEEESKKPRYRHRLLRHKLT
VSDGESGEEKKVKRKDKKEGKRRNRRKVSSDDSNDSEFHESAVSEEVSESEDDQRPRTRS
TKKAEAEENQRSYKQKKKRRRIKVQEDSSSENNNKSNSEDEDNDDSKSPGKGRKKIRKII
KDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIEDASPLKCPITTKLVLDEDEE
TKEPLVQVHRNIVTRLKPHQVDGVQFMWDCCCESVKKTKTSPGSGCILAHCMGLGKTLQV
VSFLHTVLLCDKLDFRTALVVCPLNTALNWLNEFEKWQEGFEDDEKLEVCELATVKRPQE
RSYMLQRWQDEGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHIL
KNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPI
QNGQCADSTLADVRIMKKRAHILYEMLAGCVQRKDYTALTKFLPPKYEYVLEVRMTPIQC
KLYQYYLDHLTGVGSGNEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDE
DSLDEFIASDSDETSMSLSSDDYAKKKKSKGKKVKKECSSSGSGSDNDVEVIKVWNSRSR
GGGEGNAEELVNNPPSVTKSDEGKATSSSNPGSPAPDWYKDFVTDADAEVLEHSGKMVLL
FEILRMAEELGDKVLVFSQSLISLDLIEDFLELANREKTDKEKPPIYKGEGKWFRNIDYY
RLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYD
IQSIFRVYRFGQNKPVFVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNEL
TELYTFEPDLLDDPNSEKKKKRDTPMLPKDTILAELLQINKEYIVGYHEHDSLLDHKEEE
ELTEEERKAAWAEYEAEKKGLTMRFNMPAGTNMLPTNFNSQTPYIPFNLGALSAMSNQQL
EDLINQGREKVAEATNSVTAARIQPLEDIISTIWKENVNLTESQVQALALSRQASQELDV
KRREAIYNDVLAKQQMLISCVQRILMNRRLQQQYNQQQQQQMSYQQAAMSHLMMPKPPNL
IMNPSSYQQIDMRGMYQSVSGGMQPPPLQRAPPPMRGKNPGPSQGK
NT seq
7341 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagagcccgtgagtgaaagcaagttgaatacattggtgcagaaacttcatgac
ttcttggctcactcatcggaagaatctgaggacgcaaactctcctccagcattatctaaa
aacaaaaccataggtaaaagtagagaacctaaaagtagtccatcttcaatggagaacaat
agagaagagggcagtagttcttcagaaagaaccaaatccttaggatcatcacgttcaaaa
aggaaacctacaattgtaacaaagtatgtcggatcagatgatgaacaaatcttagatgaa
actgtaaatgaagatatttcaaatgaaaactcagaaaacgatgttgatatgaaaagcttg
cctaaaggtacagtggttgtacagcctgagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaaataccgttaaaatgaaacctgaagctcccaaaaag
cgtggagaggaaggactacatggaattgtaagctgtacagcttgtgggcaacaggtgaac
cattttcaaaaggattcaatctatagacatcctacactgaaagttcttatttgtaagact
tgctacaagtattacatgagcgatgacattagccgtgattcagatggaatggatgaacag
tgtaggtggtgtgctgaaggtggaaatttgatttgctgtgacttttgccataacgccttt
tgtaaaaagtgcattttgcgcaacctgggtcgaaaggagctatcgactatactggatgaa
aataaccagtggcactgctatgtttgtcatccagagcctttgttggacttggtcactgca
tgtgacagtgtctttgaaaatttggaacagttactgcaacaaaacaaaaaaaagatcaga
gttgaaagcgaaaaaagtaaaatatatgaccatacggtcaagttttctccaaagagaaat
aactcaaattgtaatggtgaagaaaaaaaactagatgattcatattcaggttcactgacg
tattcttacaaagcactaatggtgccaaaagacttgcttaagaaaacaaaaaagctggtt
gaaactacagcaaatctgaattctagctttgtaagctttttgaaaaacgctgcagaaaat
gtagaaataagcccaactgtccagctttgtcagctaaaagctttcaaatcggtgttgagt
gacatgaaaaaagctcatctggcactagaagaaggtctgaacctggagattcaagctttg
aatgttaaaatcaaagataaaattaccaaagagaaaaaacctgatattagatcagaaaaa
aatgaggtgaaaaaagatgaaggaaaggaacatgtggcattaaaagaggatgacgctgta
aagacacagaaaaaagttgtatcagaacggcctgaaggtgagcccatggatcaaagtgtt
ccagcaatggaacaaacagataacaagcgtacatctggtgaagataaaaagtctggcaga
aatgaggaacctcagtatgaacctaatagtacagaggctttagacatggatatagtgtct
gttccctcatctgtcccggaagatattttcgagactctagaatctgctatggagattcag
attacatcagatgagcaagacagtggaaacacaggaacagatcatgagactctaaattca
aatacaaaatcaaatgctcctttgaaagataccaaaggtggttctaagttaaaatcgtcg
gcaaaaggaacgaaagaattgattgtaaaattgactcctgtttccctttcagagtctaca
attaaagctgaagatcaagacagcagtctagaaaaggggagtaaggatgttgatgtaaca
cctaaagcagaaaactgtgattccgtaaaacaaaatcataatgctggcagcgaaccttcc
acggagaacgaaacggtctcacttgtagaggaatccgatctcaggagatcgccgcgcgtg
aagaccacacctctgaggcgccaaacagacatcagtcctttgacgtcaaattcggaagaa
gatagcaatgacacgtgtaatgaaaaacgtaagagaaaatcatcaaaacaaccaaggagg
aaaaatgataaaagaaattcttctgacagtactgttgatggtcctagccctaataaactt
tctaaatcaaaaaagccatatgtattagatcatagctcggattctgatgagatgccagct
gtccttaaagaagtagcgatgatgagtcacagttcttcagatattgatagcaatagtgaa
gcaccaacaaatgatcagaagacactaaattttctaaagaatcaaccagtaaaggatgaa
aatggaaaacgaaaaaggaaaagttccagttctggttcagatttagatgctaaaagaggc
aaatcggctaaaaattccgctgctgctaaaaagaaacgacaaaactattcagattcttcg
aactatgattctgagttagaaaaagaaataaaaattttgagtaaaattgagtctgcaaaa
aaagctaagaaaaaatactcacgaaaagacgatagttatgattcctctgaagaagagcag
aggaaaaaagtcagcagtaagagaaagataaatttgaagaaacagagagagaaatcgtct
gaagatgacgatgttgagaagtcttccccagagaaggagattaatcattcttctaaagat
aagaaaatggggaaggggtcagctgctaaggaaaagataaacagagactcgaaagaaaaa
actgtaaagggaaagcaggatgagtcttctgatgttgagaagtctttactggagaaagag
gagagttctcctaagggtgcaaagttaactgaagtgaagaagagcaaggatttgaaaaag
aaaaaggcacaggaagattcttcttcagagagtactgagaaatctgcaaagaaagagcac
aattttgattcttcaaaagacagattcaagaataaaaaaggatcagaaagcaaagcgaag
aaatctgaaaaattgaaaaagaaaagttacaagaaagagcaagatgattcctcttctgat
attgaaaagtcatctccagagaaaggaagttgcaattcttctgaaaatgacaaaactaaa
aatgagccagtatttaaagaaaagaagaggaggaatttgagagagagagtatctaaaaaa
gtgcacattgatttatcttctgatgctgagaaatctcccctaaaagaggagagttcttct
gaagatgctgtgcagagtaaaaaacgaactgaaactaaagaaaagaaaaaaacaagtcac
aaaaagaaaattcccaagaaagaacagaatgactcgtcctcttctgatgaggagtcttat
gaagacagtaagaaaaagattaaaagagggtcaatgaaagaaagtaagaagagtaactta
aaaaagaaagtgtcaaaaaagaaggcggttgtcacttcctcttcctcatcggataaggac
gaaaatgatgaacagaattcaacaggtgatggaagcagtgatgagcagaaaattatgcca
gtgactgaaaacttgatgctgtctgctgatacaggattttgtcagtcatcaggagatgag
ggagagactaaatcaagggctgttccaatggaggaggaggaagatgatgatgatgacgat
cctgagaatagaattgccaagaaaatgcttttagaagaaatcaaagccaatctctcctct
gatgagaatgcatcttcagatgatgaatcggatgaagggaaaaagaaaactggaaagcaa
aatgaaaacacgggagatgatggtgagcaccaaaaagcgcctgggaaaaagtggtgctgc
agcgcccgtcgtaatttcaaagaagtgaatgaaaaggaggataattctgaatcggattca
gaggaagaagagtcaaagaagccaagatacagacataggctgctgcggcacaagctgaca
gtgagtgatggagaatctggtgaagaaaaaaaggtgaaacgaaaagacaaaaaagaaggg
aagcgcagaaatagaaggaaagtgagcagcgatgattcaaatgactctgagtttcatgaa
tctgcagttagtgaagaagtcagtgagtctgaagacgaccaacgtccaagaacaagatct
accaagaaagctgaggcggaagaaaaccagcggagttacaaacagaaaaagaaacgaagg
cgtataaaggttcaagaggattcttcaagtgaaaacaacaataagagtaattctgaggat
gaggacaatgacgattcaaaatctcccggaaaaggcaggaagaaaataaggaaaattatt
aaagatgataagcttagaacagaaacacaaaatgcacttaaagaagaagaagaaagaaga
aaacgtatagcagaaagagaacgggagagagagaaattgagagaggtgatagagatagaa
gatgcttcacctctgaaatgtcccattacaactaagctggttttagatgaagatgaagaa
accaaagaaccattagtgcaggttcacaggaatatagttaccagactgaaaccacaccaa
gtagatggtgttcagttcatgtgggattgctgttgtgaatctgtaaaaaaaacaaagaca
tctcctggttctggatgtattcttgctcactgtatgggtctggggaaaacattacaggta
gtaagttttcttcacacagtcttgctgtgtgacaagctggattttcggacagctctggta
gtgtgtccactgaacactgccttgaactggttgaatgagtttgaaaaatggcaagaaggt
tttgaagatgatgaaaaactagaggtctgtgaactagcaactgtgaaacgccctcaagag
agaagctatatgctccagcgttggcaagatgaaggaggcgtgatgataataggctatgag
atgtaccgtaaccttgcacaaggcaggaatgtgaagagtagaaaacttaaagaaatattt
aataaagctttagttgacccaggccctgactttgttgtttgtgatgaagggcacatacta
aaaaatgaagcatctgctgtttctaaggcaatgaattctattcgatccaggaggagaata
attcttacaggaacaccactgcaaaataaccttatagaatatcactgcatggttaacttt
attaaggagaatttgcttggttcgattaaggaattccgaaatcgatttataaatccaatt
cagaatggtcagtgtgcagactctactctggcagatgtcagaataatgaagaagcgtgca
catattctctatgagatgttagctggatgtgttcagaggaaagattacacggcattaaca
aagttcctcccaccaaaatacgagtatgttctagaagttcgaatgacacctattcagtgc
aaactctaccaatactacttggatcatttgacaggtgtaggtagtggcaatgaaggtgga
agaggcaaagctggagctaaactattccaggatttccagatgttgagcagaatctggact
cacccttggtgtttgcagctggactatattagcaaagaaaataagggctattttgatgaa
gacagtctggatgagttcatagcttcagattccgatgaaacttcaatgagcttaagttct
gatgattatgcaaagaaaaaaaaatccaaggggaaaaaggtgaagaaagagtgtagctca
agcggaagtggcagcgataatgatgttgaagtcattaaagtttggaattcaagatctcgt
ggaggtggagaaggaaatgcagaagaacttgtaaacaaccctccatctgttacaaaatca
gatgaaggcaaagctacatcctcttccaatcctggtagcccagcaccagattggtacaaa
gattttgtcaccgatgcagatgctgaagtgttggaacattctgggaaaatggtgcttctc
tttgaaattcttcgaatggcagaggagcttggagacaaagttctagtgtttagccagtcc
ctaatatctctggatttgatagaagattttctggagctggcaaacagagagaaaactgac
aaagagaagcctcctatttataaaggtgaaggcaaatggttcagaaacattgattactat
cgcttagatggctcaactacagctcagtcaagaaagaaatgggctgaagaatttaatgat
gaaactaatgtgagaggccgcttgtttattatatccactaaagcaggctccctcggaatt
aatctcgtggctgctaacagagtaatcatttttgatgcttcttggaacccatcatatgac
atccagagtattttcagggtttaccgctttgggcagaacaaacctgtgtttgtgtacagg
tttttggctcagggaacgatggaagataagatctatgatcgtcaggtaacaaagcagtca
ttgtctttccgggttgtcgaccaacagcaagtagaacgtcattttactatgaatgaactt
acggagctgtacacttttgagccagatttgctcgatgatcctaattcagaaaagaaaaag
aagagagatacaccaatgttgcccaaagatacaatcctggcagaattgcttcaaatcaat
aaagagtatatagttgggtatcacgaacatgattcactcctggaccataaggaggaagag
gaactcactgaagaagaaaggaaggcagcatgggcagaatatgaagcagaaaagaagggc
ttgactatgcgtttcaacatgccagctgggaccaatatgcttcccacaaatttcaactct
caaacaccgtatattcctttcaatttgggtgctctgtcagcaatgagtaatcaacagctg
gaggaccttattaatcagggaagagagaaagttgcggaagcaaccaacagtgtaactgca
gcaagaattcagccccttgaagacatcatttcaaccatatggaaagaaaacgtaaacctc
acagagagccaagtacaggccctggcgctgagcagacaggcgagccaggagcttgatgtc
aagcgccgagaagccatctataacgatgtccttgctaaacaacagatgttgatcagttgt
gttcagaggatacttatgaacagacgactccagcagcagtacaatcagcagcaacagcag
cagatgtcttaccagcaagccgcaatgagtcatctcatgatgccaaagcctccaaattta
atcatgaatccttccagctaccaacagatagatatgagaggaatgtatcagtcagtgtcc
ggtggtatgcagccaccaccgttacaacgagcgccacccccaatgagaggcaaaaatcca
gggccttcccaagggaaataa
DBGET
integrated database retrieval system
