Grus americana (Whooping crane): 129212391
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Entry
129212391 CDS
T11359
Symbol
UTP4
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
game Grus americana (Whooping crane)
Pathway
game03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
game00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129212391 (UTP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
game03009
]
129212391 (UTP4)
Ribosome biogenesis [BR:
game03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
129212391 (UTP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_Prp19
ANAPC4_WD40
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Ge1_WD40
WD40_Gbeta
Beta-prop_ACSF4
Frtz
Beta-prop_SPT8
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
129212391
NCBI-ProteinID:
XP_054696899
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Position
13:complement(1336167..1411776)
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AA seq
686 aa
AA seq
DB search
MGEFEVHRVRFFGLVPAGVRCLACEPRGGRLALARTDGAVEVYNFAANYFQERVIPGNEA
RSVEALCWAAGDRLFGAGLGGDITEYDLARLCAARSVDGCGGPIWSMAANSTGTQLAIGC
EDGSVKLFQVVPGGIQFERNLDRRKGRILCLSWHPSDTHIAAGSIDILRVFDVCSGQTVQ
RIMVNYHVQKVKRECIVWSIAFLSSGTVVTSDSFGRVQFWDWERGTLLESHTISTSAVLS
LAVSEKEDSIIVGTSTGATYQFQLLPVKMGSLEKRWVRTKPFQHHTHDVRAVAHSSTALI
SGGLDAQLVIRPLMEKMQKKGYDAALRKFTFPHRRLVSCARKARLLLFQFSQHLELWRLG
STNKTGKDGEVLPLCRMPEHLVQLKSKGPEHIYCSCVSPCGSWVAYSTASRFHLYRVQYE
GDSISVKKVPKVPKLLPPAYQLQFSADSGSLFVASARGSVHVLQLLELGGCKLLHTFRPP
SGSPEAVYLLAASADGHWVAAVSGDWAIHIYNLKCFKHHCAVPAYSCAVTALAIHPVTNN
LVIAYSDQQLFEFSIPEKQYTAWSRMVQNCGLHRVWLERDSPITHITFNPKNPSHILLHD
IYMFCVLDKSLPLPDNSALLMNQSTLKQLPENARQRQLHAFKICKKFQPLLFADLLDENC
LVMVERPIMDIKTQLPLPIQQKKFGT
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgggggagttcgaggtgcaccgggtgcggttcttcggcctggtgccggccggcgtgcgc
tgcctggcctgtgagccccggggcggccgcctggccctggcccgcaccgacggcgccgtc
gaggtgtacaacttcgccgccaactacttccaggagagggtcatcccggggaacgaggcc
cggtcggtggaggcgctgtgctgggcggcgggagaccggctcttcggggcgggcctcggc
ggggacatcaccgagtacgacctggcccggctgtgcgcggcccgctccgtcgatggctgc
ggggggcccatctggagcatggcggctaacagcaccggcacgcagctggcgatcggctgc
gaggacggctccgttaagctcttccaagtggtgcccggggggatccagttcgagcggaac
ctggacaggcggaaaggccgcatcctgtgcctctcctggcacccgtcggacactcacata
gcggccggctccatcgacatcctccgcgtgtttgacgtctgttcaggccaaaccgtgcag
aggatcatggtgaactaccacgtgcagaaggtgaagcgcgagtgcatcgtgtggagcatc
gccttcctctccagcggcaccgtcgtcacctcggactcctttgggagggtgcagttctgg
gactgggagcgagggacgctgctggagtcccacaccatcagcacctcggccgtcctctcg
ctggccgtgtcggagaaagaggacagcatcatcgtgggcacctccaccggggccacctac
cagtttcagctgctgccggtgaagatgggcagcctggagaagcgctgggtgcggacgaag
cccttccagcatcacacccacgacgtgcgagctgtggctcacagctccacggctctcatc
tccgggggcctggacgcccagctggtgatccgcccgctgatggagaagatgcagaagaag
ggctacgacgcagcactccgcaaattcacctttcctcaccgacgcctcgtctcctgtgcc
aggaaagcccggctgctcctcttccagttctcccagcacctggagctctggagacttggc
tctaccaacaagactggaaaggatggcgaggtccttcccttgtgccgcatgcccgagcac
ctcgtgcagctcaagagcaagggtccagagcacatctactgcagctgtgtctcaccctgc
ggcagctgggtcgcctactccacggcctcccgcttccacctctaccgagtgcaatacgag
ggcgacagcatcagcgttaagaaggtccccaaagtgcccaagctgctgcccccggcctac
cagctccagttctctgccgactccggcagcctcttcgtcgcctccgctcgaggctccgtc
cacgtcctgcagctgctggagctggggggctgcaaactcctgcacacgtttcggccacct
tcagggtcccctgaggccgtttacctgctggcagcgagcgcagatgggcactgggtggcc
gcggtcagcggggactgggcaatccacatctacaacctgaaatgcttcaagcatcactgc
gcggtgcctgcgtacagctgcgcggtgacggccctcgccatccaccccgtcaccaacaac
ctcgttatcgcctactcggaccagcagctgtttgagttcagcatcccggagaagcagtac
acggcctggagccgcatggtgcagaactgcgggctgcacagggtctggctggagagggac
tcacccatcacccacatcaccttcaaccccaagaacccctcgcacatcctgctccacgac
atctacatgttctgtgtcctcgacaagtccctgcccctgccagacaacagtgccctcctg
atgaaccagagcaccctgaagcagctcccagagaacgccaggcagcggcagctccacgcc
ttcaagatctgcaagaagttccagcccctgctctttgcggatctgctggacgagaactgc
ctggtgatggtggagcggcccatcatggacatcaagacccagctaccgctgcccatccaa
cagaagaaatttggcacctga
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