Grus americana (Whooping crane): 129212795
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Entry
129212795 CDS
T11359
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
game Grus americana (Whooping crane)
Pathway
game03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
game00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129212795 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
game03041
]
129212795 (DDX46)
Enzymes [BR:
game01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129212795 (DDX46)
Spliceosome [BR:
game03041
]
Complex A
U2 snRNP components
U2 related factors
129212795 (DDX46)
Complex B
129212795 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129212795
NCBI-ProteinID:
XP_054697863
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Position
14:3651958..3674434
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AA seq
1045 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRGKRGEDRRSRSRDRERRRERSRSRDKRRS
RSRDRKRQRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPSKNRKTENRSRSK
EKTEGVEVSKEKKKDKEDKEEEKEKDATTNTVATENFDQNKLEEEMRKRKERVEKWREEQ
RKKAMENIGELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGNEVEDEELDPLDAYMEE
VKEEVKKFNMRSVKGGGGSEKKSGPTVTKVVTVVTTKKAAAESEKKKGELMENDQDAMEY
SSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYR
LELEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQTQAIPAIMNGRDLIG
IAKTGSGKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGL
RVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRM
FDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVE
QHVIVIEEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGID
QYDRDSIINDFKNGICKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAG
NKGYAYTFITEDQARYAGDIIKALELSGNPIPTDLEKLWADFKDQQKAEGKLIKKSSGFS
GKGFKFDETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDMAAPG
TSNAPTPSAGNAEKLEIAKRLALRINAQKNLGAEAQVLVPFHFKDVMQQATNAILRGGTI
QAPTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKRYEEELEINDFPQTAR
WKVTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEIT
RLIKEELIRLQNSYQPTNKGRYKVL
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgggacgggagtccaggcattatcggaagcgctctgcgtcacgtggccgctctggtagc
cgttctagaagtcgttctccatctgacaaaagaggaaaacgtggagaagacagacgttct
agaagtagagatcgagaacgtaggcgtgagaggtcacgcagtagggacaagagaaggtct
cgatcgcgtgacagaaaacgtcaaagacgttcaagaagtagagaaagggaacggagccga
gagagaagaagatcccggagccgagagaggaggcgctctagaagcaggagtagaggtaga
cggtctcgatcctccagtccaagcaagaacaggaaaacagaaaacagatcaagatctaag
gaaaagacagaaggtgtggaagtttccaaagaaaagaaaaaagacaaagaagacaaagag
gaggagaaggagaaggatgctaccacaaatactgtggccactgagaattttgatcagaac
aagctagaagaagaaatgagaaaacgaaaagaaagagtggagaaatggagggaagagcaa
cgcaagaaggctatggaaaacataggagaattgaaaaaagaaattgaagagatgaaacag
gggaaaaaatggagtttagaagatgatgatgatgatgaagaggaaactgcagaaggagaa
aaagaaggcaatgaggttgaagatgaagagttagatcctttggatgcttatatggaagaa
gtaaaagaagaagtcaagaagttcaatatgagaagtgtgaaaggtggaggtggaagtgaa
aagaaatccggaccaactgttaccaaagtagtaaccgtggtgacaaccaaaaaggcagct
gcagagtcagaaaagaagaaaggggagctcatggagaacgaccaagatgcaatggagtat
tcctcggaagaagaggaagttgatcttcagactgccctgactggctatcagaccaagcag
agaaagctgctagaaccagtggatcacggaaagatagaatatgaacctttcaggaaaaac
ttctatgttgaagtaccagaactggctaaaatgactcaagaagaggtgaatgtgtacagg
ctggagttggagggaattacggtcaagggaaaaggctgccccaaaccaataaaaacctgg
gtacagtgtggcatttccatgaagattctcactgccctcaaaaaacatggctatgaaaag
cccactcccattcaaacccaggctatcccagcaattatgaatggacgtgacttgattggc
atcgctaaaacaggaagcggaaaaactattgcatttctgttgcccatgttcagacacatt
atggatcagagagcgttagaagaaggagaaggtcccatagctgtcattatgacacctact
cgcgagttggctttgcagattaccaaggagtgtaagaaattctcaaagacacttgggctt
cgagttgtctgtgtttacggaggaacaggaatcagtgaacagatagctgaactcaaaaga
ggtgctgaaattattgtttgcacacctggacgtatgattgacatgttagcagctaacaat
ggtcgggtgacaaacctccggagagtcacatacgttgtacttgatgaagcagacagaatg
tttgacatgggttttgagcctcaggttatgcgcattgtagacaacgtcaggcctgaccgt
cagactgtcatgttctctgctacttttcccagagctatggaggcattagctcggagaatc
ctaagtaaaccgatagaagtgcaggtcggaggcagaagtgttgtctgttctgatgtggag
caacatgttattgtcatagaagaggagaacaagtttttgaaattactggagctactggga
cactatcaggagaaaggatcagttatcatatttgtagataaacaggaacacgctgatggg
ttgttgaaagatttaatgagagcctcttatccctgcttgtctcttcatggaggtattgat
cagtatgacagggacagcataattaatgatttcaagaatggaatttgcaaacttctggtt
gccacatccgtagcagcaaggggcttggatgtaaaacagttgatgctggtggtcaattat
agctgtcccaaccactatgaagattatgtccaccgagcaggccgaactggacgagctggc
aataaagggtatgcgtacacattcattactgaggatcaggcacggtatgctggtgatatc
attaaggctttggaattgtccgggaatccaattcctactgatttggagaagctctgggct
gacttcaaagaccaacagaaggctgagggaaagctgattaaaaaaagcagtggattctct
ggcaaaggttttaaatttgatgagacagaacaggctttggctaatgaaagaaagaagcta
caaaaagcagctcttggcttgcaagattcagatgatgaagatacagctgttgacattgat
gaacaaattgaaagcatgttcaattcgaagaaaagggtaaaagacatggcagcaccagga
acatcaaatgctcctacaccgtcagccgggaatgcagaaaaattggaaattgctaaaaga
ttggctttgagaatcaatgcccagaagaatcttggagcagaggcacaagtattggtcccc
ttccacttcaaggatgtgatgcagcaggctacaaatgctatcctgaggggaggcacgatt
caagctcctactgtatctgccaagaccattgcagagcaactggctgaaaaaatcaatgct
aagctcaattacgtacccatagagaagcaggaggaagagaaacaggatggaggacaaaac
gaatcctttaagagatacgaagaagaattggagatcaatgacttcccacagactgccaga
tggaaagttacctccaaagaagcgctccagaggatcagcgaatattctgaagctgctatt
acaatcagaggaacttatttccctccaggcaaagaacccaaggaaggagaacgaaagatt
tatttggctatagaaagtgccaatgaactggctgtacagaaagcaaaggcagaaatcaca
cgacttataaaagaggagcttatcagattgcaaaattcataccaaccaaccaacaaagga
agatacaaagttctatga
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integrated database retrieval system
