Grus americana (Whooping crane): 129213489
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Entry
129213489 CDS
T11359
Symbol
TBL3
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
game Grus americana (Whooping crane)
Pathway
game03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
game00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129213489 (TBL3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
game03009
]
129213489 (TBL3)
Ribosome biogenesis [BR:
game03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
129213489 (TBL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Utp13
EIF3I
WDR55
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_Nup120_160
Beta-prop_SPT8
Beta-prop_VPS8
WDR54
LRRC37AB_C
ABC_toxin_N
Motif
Other DBs
NCBI-GeneID:
129213489
NCBI-ProteinID:
XP_054699581
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Position
15:complement(8993334..9004139)
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AA seq
806 aa
AA seq
DB search
MEAAAASPVRFKSNYAVSRKIEPFYKGGRVQINRDGKFMFCPCGTKLNVIDVETGALYSL
QQDDEEDISSFVLSPDDEILVTGSRALLLKQWNWRENKCVRTWKAVHIAPVASMAFDSTS
TLLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSIDYKIRIWD
LNSSKCVAMLDGHFSAVTSLAFADGNTLISSGRDKICMVWDLKTRESKRTVPVYESVEAA
ILLPEKGDFSQLGVKKQGLHFVTAGSKGILKVWEVATAACVYTQPVPFESKEEASERSLT
QCMLVPERNEIVTVSVEHNIVFYDAQTLQLRKQLAGYNDEVLDVKFLGPGDSHIVVATNS
PQLKVFELATSHCQILYGHTETILALDVFRKGLMFVSCAKDKSIRVWRMNKNGRVICVAQ
GLGHAHGVGAVSCSRLKESFIVTSSQDCTIKIWNIPESLTSKAKAALISSPETLHAKVTE
RGHDKDINSVTVSPNDKLIATGSQDRLAKLWSCSDCSLLGVFTGHKRGIWCVQFSPVDQI
LATSSADGTLKLWGLRDFSCLKTFEGHDASVLKIIFVSRGTQLLSSGSDGLLKLWTIKTN
ECVKTLDGHEDKIWGLHSNKQDDMVVTASSDSCITLWKDVTETEEKEAQAKQEEQIMKEQ
ELSNLLHEKRYLKALGLAISLDRPHTVLMVVKAILKETDGRKHLEENIVQLRKDQKEAVL
TFLVTWNTNSRNCHEAQAVIETLLKHEAPDSLLQYSGIKSAVESLLPYTERHFQRLSRLL
QASMFIDFMWQNMRLADASLQEDMTL
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggccgccgccagccctgtgcgattcaagagcaactacgctgtgtcgaggaaa
atcgagcctttctacaaaggagggcgagtccagataaaccgggatggaaagttcatgttt
tgcccctgtgggacgaagctgaacgtcatcgatgtagaaacaggagctctctacagcctc
cagcaggatgacgaggaggatatcagttcatttgttcttagccctgatgatgagatcctc
gtgacagggagccgagccctgttgctgaagcagtggaactggcgagagaacaagtgtgtt
cgcacgtggaaagctgtgcacatagcgccagttgctagcatggcctttgactctacatca
acgttgttagccacaggaggctgtgacagcaccattaagatctgggatatgatcaaacag
tactgcacacacaacctaaaaggatcttcaggagttgtacaccttgttgagttccaccct
gatatctcccgcctgcaactcttctcctcctcaattgactacaaaatccgcatctgggac
ctgaattccagcaagtgcgttgctatgctggacggccacttcagtgctgtcacttcactg
gcctttgcagatggaaacacgctcattagttccggccgtgataaaatctgcatggtgtgg
gacctgaaaaccagagaaagtaaacgaaccgtccctgtctatgagagtgtggaagctgcc
atcttgttgcctgaaaagggagatttctctcaactgggtgtgaagaaacaagggttgcac
tttgtcacagctggcagcaaaggcatcctgaaagtgtgggaggttgccacagctgcttgt
gtgtatacccagcctgtgccctttgagtccaaggaggaggccagcgagcgcagtctcacc
cagtgcatgctcgtgcctgagagaaatgagattgtcacagtgtctgtggaacacaacatt
gttttctatgatgctcaaactcttcagctcaggaagcagcttgcaggttacaacgatgag
gttctggatgtgaagttccttggacctggtgattctcacattgttgtggctaccaacagc
cctcagctgaaagtgtttgaactggcaacatcacactgccagatcctctatggccacaca
gaaacaattcttgctttggatgtcttcagaaaaggcctgatgtttgtcagctgtgctaag
gacaaaagcattcgagtctggcggatgaacaaaaatggaagagtgatttgtgttgcccaa
ggattgggtcatgcgcatggagtaggagctgtttcttgctcaagactgaaggaaagcttc
atagtgaccagcagccaggactgcacaatcaagatctggaatatcccggaatccctcact
tccaaggcaaaagcagccttgatctccagtccagaaacccttcatgcaaaagtgactgag
aggggtcatgacaaggacataaacagtgtgacggtttctccgaatgacaagctcattgcc
acaggctcacaggatcggctggccaagctgtggtcctgttctgattgctctttgctgggt
gtcttcaccggacataagcgtggaatctggtgcgtgcagttctctccagtggatcagatc
ttggccacctcttcagcagatgggaccctgaagctctggggtcttcgggacttcagctgt
ctgaagacctttgaaggtcatgatgcctctgtactgaagataatttttgtaagccgagga
acacagctgctcagcagcggttctgatggtctcttaaaactctggacaattaaaacaaat
gagtgtgtgaaaacattagatggtcacgaagataaaatctggggtcttcactctaacaag
caagatgatatggttgtgacagcatccagtgactcctgcatcacactgtggaaggatgtc
actgaaactgaagagaaagaggcgcaagctaaacaggaggagcagattatgaaagagcaa
gagctttctaacctgcttcatgagaaaagatacctcaaagctttagggttggcaatctct
ctggatcgtccacacacagtgttgatggtggtcaaagccatcctcaaggaaaccgatggg
agaaagcacttggaagagaacattgttcagctccggaaggatcagaaagaggcggtgtta
acgttcttggtgacgtggaatacgaactctcgaaactgccacgaagcccaagctgtcatt
gaaaccctcctgaagcacgaagcaccggacagcctcctgcagtactcaggcattaaatct
gctgtggagtccctgctgccttacactgagcgccatttccagagactgagccgattgcta
caggcctccatgttcattgatttcatgtggcaaaacatgaggctggctgatgcgtccctg
caggaagacatgactttgtga
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