Grus americana (Whooping crane): 129213606
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Entry
129213606 CDS
T11359
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
game Grus americana (Whooping crane)
Brite
KEGG Orthology (KO) [BR:
game00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
game03009
]
129213606 (DDX55)
Enzymes [BR:
game01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129213606 (DDX55)
Ribosome biogenesis [BR:
game03009
]
Eukaryotic type
Pre-60S particles
Helicases
129213606 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
SBF_like
SHOCT
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
129213606
NCBI-ProteinID:
XP_054699943
LinkDB
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Position
16:complement(13906397..13918640)
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AA seq
629 aa
AA seq
DB search
MLEPGRGGKAGRRTGPSRPSKMEAVTEGSWESLPVALSTGVLQALRELGFARMTPVQSAT
IPLFMNNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKMQVGAIIITPTRELAIQID
EVLSHFTNHFPRFSQILLIGGRNPMEDVEKFKEHGGNIIVATPGRLEDLFRRKADGLDLA
SCVKSLDVLVLDEADRLLDMGFEASLNTILDFLPKQRRTGLFSATQTQEVENLVRAGLRN
PVRISVKEKGVAASNTQKTPTRLENYYMICKADEKFNQLVHFLRQHKQEKHLVFFSTCAC
VEYYGKALESLIKQVKIMSIHGKMKHKRNKIFTEFRKLPGGILVCTDVMARGIDIPEVHW
VLQYDPPSSASAFVHRCGRTARIGNVGSALVFLLPMEESYVNFLSINQKCPMQEMKPQTN
VLDLLPKLQSMALADRAVFEKGMKAFVSYVQAYAKHECNLIFRIKDLDFASLAKGFALLK
MPKMPELRGKCFPDFTPVTVNTDSISFKDKNREKQRQKQLEQQRKDRQENDGKKKFIKNK
AWSKQKAKKEKKKKITAKRKREEGSDIEDEDMEELLNDTRLLKRLKKGKISEEEFEKRLT
GDQSRLKAETVADLESEAAPVPQRSCFRN
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgctggagcctgggcggggggggaaggccgggcggcggacagggccgagccgcccgtca
aagatggaggcggtgactgaggggagctgggagtcgctgcccgtggcgctgagcactggc
gtgctgcaggcgctgcgggagctcggcttcgcccgcatgaccccggtgcagtctgcaact
attccgctcttcatgaataacaaagatgttgctgcagaagcggtaacaggcagtggcaaa
accttagcgtttgtaattcccatactggaaattcttctcagacgggaagaaaaattaaag
aaaatgcaggttggagctataattatcacaccaacaagagaattagctattcaaattgat
gaggtgctatcacatttcacaaaccacttccccaggtttagtcagattcttttaattggt
ggtaggaatcccatggaagatgttgaaaagtttaaagaacatggtgggaacatcattgta
gctacaccgggccgcttggaggatctgttcagaagaaaagcagatgggctggatctagca
agctgtgtgaagtctcttgatgtgttggtattagatgaagcagacagacttctagatatg
ggctttgaagcaagtttaaacaccattctggactttttgcccaagcagagacggacaggt
ctgttctcagcaactcagactcaagaggtggagaacctggtgagagcaggtctccggaat
cctgtccgcatctcagtaaaagagaagggagtggcagcaagcaacacacagaaaactcca
acgcgcctggaaaactattatatgatatgcaaagcagatgaaaaatttaatcagttggtg
cattttcttcgacagcacaaacaggagaaacatctagtctttttcagcacgtgtgcctgt
gtggaatactatgggaaggctttggaatccttaattaaacaagtgaaaataatgagcatt
catgggaaaatgaaacacaaacgtaacaagatttttactgaatttcggaagctcccaggt
ggcattttagtttgcactgatgtgatggcccgtggcatagacattccagaagtacactgg
gttttacagtatgacccacctagcagtgcaagtgcctttgtgcaccgctgtggtcgaaca
gcgcggatcggcaatgttggcagcgcacttgtatttttgcttcccatggaagaatcttac
gttaactttctctccatcaaccaaaagtgtcccatgcaggaaatgaaaccacagacaaat
gtgttagatctccttccaaaactgcagtctatggccctagctgacagggcagtatttgag
aaagggatgaaagcatttgtgtcttatgtccaggcttacgccaaacatgaatgtaatctg
atcttccgaataaaagatctggattttgctagtcttgccaaaggttttgcattgttgaaa
atgccaaagatgcctgaactaagaggaaaatgttttccagactttactccggtcactgtt
aatacggactccatttcatttaaggataaaaatagagaaaaacagagacaaaagcaatta
gaacaacaaagaaaagacagacaagaaaatgacgggaaaaagaaattcataaagaacaag
gcctggtcaaagcagaaagccaagaaggagaagaaaaagaaaataacagctaaaaggaag
cgtgaagagggctctgatattgaagatgaggatatggaagagttgctgaatgacacaagg
ctcttgaaaagattaaaaaaaggaaaaattagtgaagaagagtttgagaagagactaaca
ggcgaccagagtagactcaaagcagaaactgttgctgacttagagtctgaagctgctcct
gtgccccaaaggagctgctttaggaactga
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