Grus americana (Whooping crane): 129213886
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Entry
129213886 CDS
T11359
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
game Grus americana (Whooping crane)
Pathway
game03013
Nucleocytoplasmic transport
game03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
game00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129213886 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
129213886 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
game03019
]
129213886 (THOC5)
03041 Spliceosome [BR:
game03041
]
129213886 (THOC5)
Messenger RNA biogenesis [BR:
game03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
129213886 (THOC5)
Spliceosome [BR:
game03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129213886 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
129213886
NCBI-ProteinID:
XP_054700655
LinkDB
All DBs
Position
16:3014571..3028134
Genome browser
AA seq
697 aa
AA seq
DB search
MVLHLLPQSLTGSTMSSDSSKKRKPKVIRTDGGPQEGKRGKADADQDVRYYSEECEVDLR
DPIKDYELYRETCQELQRLMAEIQELKSRGIKDNASEIDERRIQSCVHFMTLKKLNRLAH
IRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSLEEFY
KEAPPEISRPAITLSEPHQQTLARLDWELEQRKRLAERYKECLTSKEKILKEIEVKKEYL
SSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQASAYGQACDKKL
VVAIEGSVEEAKALYKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPL
SVTVDLKCKDENVLHLTFHYLMNLNVMTVKAKVTTAVEMTTAISAGDLLSPDSLLNCLYP
GDHGRKTPNPANQFQFDKVGILTLSDYVTELGHPYVWVQKLGGLHFPKDQPQHTVTADNS
LSASHMELTVKLLRTRLQSRLALHKQFASLEHGVVPVSSECQHLFPAKIVSRLVKWAAIP
YEDYAELPYTKDVIEAGLAEDTHLYYMALIERGTAKLQAAVVLNPGYSTLPPVFSLCLNW
KGERTSSNDDNIRAMESEVNVNYKELWGPKPGYQLLTNQLQRLCMVLDVYLETEPHDTSV
EGPKEFPQEKMCLRLVRGPMRLKPFKFNYPQGFFSHR
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggttttgcatcttctcccccagtccttgactggcagcaccatgtcatcggactccagc
aagaagaggaaacccaaagtgatccgcacggatgggggcccgcaggagggcaagcgaggc
aaggccgatgctgaccaggacgttaggtactacagcgaggagtgtgaggtggatctccgt
gaccctatcaaagactacgaactctacagagagacttgccaggagcttcagagactgatg
gcagaaatccaggagctgaagagcaggggcatcaaggacaacgcttcggagatcgatgag
cggcgcattcagagctgtgtccacttcatgaccctgaagaagctcaaccggttggctcat
attcggctgaagaaagggagagatcaaacccacgaggcaaagcagaaggtcgacgcgtat
cacctgcagctccagaacttgctctatgaggtgatgcacctgcagaaagagatcaccaaa
tgcctggagttcaagtcaaaacatgaggagatcgaactggtgagcctggaggagttttac
aaagaggccccccccgaaatcagccggcctgccatcaccctgtctgagccccaccagcag
accctggcccgcctggactgggagctggagcagcgcaagaggctggcagagaggtacaag
gagtgtctgaccagcaaggagaagatcctgaaggagatcgaggtgaagaaggaatatctg
agcagcctccagcctcgactcaacagcatcatgcaggcctccctgcctgtccaggagtat
ctcttcatgcctttcgaccaggcgcacaaacagtacgagacagcccgacacctcccgccg
cctctctacgtcctctttgttcaagccagtgcctacggtcaggcctgcgataagaagctt
gtggtggccattgaagggagtgtagaagaagccaaagccctgtacaagccacctgaggac
tcgcaggatgatgaaagcgattctgacgcagaggaggagcagaccacgaagcggcgcagg
cccaccctgggcgtgcagttggacgacaagcgcaaggagatgctcaagcggcaccccttg
tccgtcactgttgacctgaagtgcaaagatgagaatgtgcttcacctgaccttccactac
ctgatgaacctcaacgtcatgacggtgaaagccaaggtgaccactgccgtcgagatgaca
acggccatcagtgccggtgacctgctgtccccagactccctcctgaactgcctttatcca
ggagaccatgggaggaaaacgcccaacccagccaaccaattccagtttgataaagtgggc
atcctgaccttgagcgactacgtgacagagctggggcacccctatgtgtgggtgcagaag
ctgggcggcctgcatttccccaaggatcagcctcagcacacggtcactgcggacaactcg
ctgagtgccagccacatggagctgacggtgaagctcctgcggacgaggctgcagtcccgc
ctggctctccacaagcagtttgcgtcgctcgagcacggtgttgtgccagtctccagcgag
tgccagcacctcttccctgccaagatcgtctcacgcctggtgaagtgggctgccattccc
tacgaagattacgcggagctcccttacactaaagatgtgatagaggccggcttggctgaa
gacactcacctctactacatggccctgatagaaagggggacagccaagctccaggctgcc
gtggtcctcaaccccggttactccacgctgccgcccgtcttcagcctgtgcctgaactgg
aaaggagagcgaaccagcagcaacgatgacaacattcgggccatggagagcgaggtcaac
gtgaactacaaggagctgtggggacccaaaccgggctaccagctcctcaccaaccagctg
cagcgtctctgcatggtgctggatgtctatctggagacagaaccccacgacaccagcgtg
gaggggcccaaggagtttccccaggagaagatgtgtctgcgcttggtcagggggcccatg
cgcctgaagcccttcaagttcaactaccctcaggggttcttcagccatcgctga
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