Grus americana (Whooping crane): 129214322
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Entry
129214322 CDS
T11359
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
game Grus americana (Whooping crane)
Brite
KEGG Orthology (KO) [BR:
game00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
game03036
]
129214322 (CHD6)
Chromosome and associated proteins [BR:
game03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129214322 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Chromo
Helicase_C
BRK
ResIII
HTH_CHD1_Hrp3
DEAD
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
129214322
NCBI-ProteinID:
XP_054701788
LinkDB
All DBs
Position
17:757040..847847
Genome browser
AA seq
2762 aa
AA seq
DB search
MLFPYRRLLPLGDSQPKITFIPDLMIMKIQKKEKQPPSLKALSCSPMSDAWECKAQDPFA
SSEEQDEVPHQVTVADTDTGGQCQCPEEEPDGAPQKRTSTQNGMQDSGGGGTGVKKKRKK
KDLGEQEGGEKAAVEVKPKRRREPKEPKEPKKAKEPKKPKEPKQREVAKKPRKPREPKAP
KEPKDKKNSSEPATRARPRKSSKDTPVEKKKKGKRKNEIPVDSLDLDQDLLSPSVQSPEE
SAESADSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEP
PEDDANIIEKILASRMVQKEAHPGGLAFEMEEFYVKYRNFSYLHCKWATLEELEKDPRIS
QKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSL
PYEESTWELEEDVDPGKIKEFEALQIPPETKHMVTYPEERPASESWQKLEKSREYKNSNQ
LREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLST
ITNWEREFRTWTEMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFEMI
LADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSL
LNFLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIE
VELTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILE
DFRKTHSPEAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLI
QRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSD
WNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGS
TNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGST
FAKASFVASGNRTDISLDDPNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSF
EDDELMEFSELDSDSDERPTRSRRFNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGR
FKWHLNEKDMEMICRALLVYCVKHYKGDEKIKSFIWDLITPTKDGQNQALQNHSGLSAPV
PRGRKGKKTKNQMLLPEIKNADWLATCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLK
AEVLGEAADKAFEGTPARELDVLLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAM
RADPALCFLEKVGMPDEKLLSAEQGVSDGAQDAAERGSMDKEESGGEKLEGLPKQEDVVA
AGAGEASEKRDEAAAAQDGSDSDRSCWPVSSALTARLRRLVTVYQRCNRKELPPRAEMLV
PGNHGYWLQDEMFRRASEMDSVNKEMQKRWTRREQADFYRTVSSFGVIYDQEKKIFDWAQ
FRAISRLEKKTDESLEKYFYSFVAMCKNVCGLPLWKEDGPPDPDIYVEPITEERAARTLY
RIELLRKVREQVLKCPQLHERLKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYI
MNDPQLSFLDAYRNYAQHKRTGLPGPETLCCLYQTNSKLYSSPLYSQVDRTCESLENEAE
SQIKLETIDSTMSQAGGSPPDANCETFMSKVRDIISSNYDESSLPDSLVCMMYDEKACNS
EQSSLARDSPSCTDVGSSVAKLSEGKLEGDEDPSSCDADAMRETPFLEGLQVGCDRTDSR
NEEAEPSPSTPESDPSRSAPAELCEALQQKGDLTRPAPVLPEHGAMEGVLSVGLYSPALH
NYEIKVPPEQRFISLLQEKGMEAKSGPSQSHSEEDEEEEEDDDNSEAAADVVEGLSGPRT
RAGCDPEASERGGEEQSSGLPTPEDTCPEDVNGERESLGLGTPEGLGEPGPEGREDRGVD
EESTLQHSPGQAQSQVFSLPAPLLGAPGAEPPCAGGEAWGRGAEGQTGCRVTLHPEPQGV
KQEECENREEEKASSSQSQDGPEKYLEEESKSSASVLPGEIDDLQDARAPTIAQLLQEKT
LYSFSEWPKDRVIINRIDNICHAILKGKWPSSSQQFETQSLLTAPVVASNAGSRNSFAES
EAADPSFNNGVLISQVQKEGFLTPAFAKDERKHRRPYEFEMERDAKQRSLEQLAATHVHP
PIMLNGWRDAAVDLSRASDGSPGNSSPFPLNTNMPKLGTVNTLQGSLGMDLSGILQAGLI
HPVTGQIVNGSLRRDDAAMRRRRGRRKNVEGMDLIFLKERPLPTRLQDVQEDQPQPPQTS
PLPDGPVAATSTPQPVPAAGSQAEKAVPNKSLLDWLRQQSDYTLDVPGFGTSFSDKPKQR
RQRCKDPSKLDINSLTGEERVPVVHKGTGRRLGGATAPALKELPRWLDANLEYAVAADWA
DIVKLSGYLPESKFNRILTEPVLRDAGPRRRGRRPRSELIKGPGIVADSSSGMGPLFMNG
LIAGMDLVGLQNMRNMQGIPLTGLVGFPAGFAAVPAGEDVKSTLSMLPMMLPGMATVPQM
FGVGGLLNPPMTTTCTATAPTSLTSTTKSGTASAEKAAEDKQSSQDVKKETLSEDKPGPS
SFSNQTESAITTSSPVAFNPFLIPGMSPGLIYPSMFLSPGIGMALPGIQQTRHSEAANLE
SQKRKRKKAKGESANPEPETVSLPEKEAANSQNCTEQTPPLSAEKEQDGPAAEEREAARD
TN
NT seq
8289 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttccataccgcaggctgttgcctctaggggattcccagcccaaaataacattc
atcccagatttgatgataatgaaaatacagaaaaaagaaaagcagccgccaagcttaaaa
gcgctgagctgctccccaatgtcggatgcctgggagtgcaaggctcaggacccctttgcc
agcagcgaggagcaggacgaggtgccccaccaggtgacagtggcggacacggacacgggc
ggccagtgccagtgcccagaggaggagcccgacggggctccccagaagcggacgagcacc
cagaatgggatgcaggacagtgggggcgggggcacgggggtgaagaagaaacggaagaaa
aaggatctgggagagcaggaagggggagaaaaagcagctgtggaggtgaaaccaaagagg
aggagagagcctaaagaaccaaaagagcctaaaaaggctaaggagcccaagaaaccgaag
gagcccaaacagagggaggtggccaagaagccccggaaacctcgggaacccaaagccccc
aaggagcctaaagacaagaagaacagctcggagcctgccaccagagcaagacccaggaag
agcagcaaggacacccctgtggagaagaagaagaaagggaagaggaaaaatgaaatacca
gtggacagtttggatttggatcaggatctcctgagcccatccgtgcagagcccagaggag
tctgcagagtcggctgacagccagaaacgccgctcaggaaggcaagtgaagaggaggaag
tacaacgaggacctggatttcaaggtggtggatgatgatggcgagacaatagctgtgctg
ggagctgggcgaacctctgcgctctctgcctctactctggcatggcaggcagaggagcct
cctgaggatgatgccaatatcatcgagaagatccttgcctccaggatggtgcagaaggag
gctcatcccggaggcctggcgtttgagatggaggagttctacgttaagtacaggaacttc
tcctacctccactgtaagtgggcaactctggaggagctggagaaggaccccaggatctcc
cagaagataaagcgctttcggaacaagcaggctcagatgaagcatattttcacagagcct
gatgaggatttgttcaacccggactacgtggaggtagatcgaattctggaggtggctcac
acgaaagaccctgacaccggggaggaggtgactcattacctggtgaagtggtgctcgctg
ccctacgaggagagcacctgggagctggaggaggatgtcgacccagggaagattaaagag
tttgaagccctccaaatccccccagaaaccaagcacatggtaacgtacccagaggagcgc
ccggcatctgagtcctggcagaaactggagaagtcccgggagtataagaacagcaaccag
ctgcgggagtatcagctggagggaatgaactggctgctctttaactggtataacaggaag
aactgcatcctggctgacgagatggggctggggaagacaatccagtcaatcaccttcctc
tcagaaatattcctgatggggatccatggccccttcctcatcatcgcacctctctccacc
atcaccaactgggagagggagttccgcacctggacagagatgaatgccatcgtgtaccac
ggcagccagatcagccggcagatgatccagcagtacgagatggtgtacagggacacccag
ggtaaccctctccctgggatcttcaagttccaggtggttatcaccacctttgagatgatc
cttgccgactgcccggagctgaagaagattcagtggcgctgcgtggtcattgacgaggca
catcgcctgaagaacaggaactgcaaactcctggaggggctgaagctcatggccctggag
cacaaggtgctgctgacagggacgcccctgcagaactcggtggaggagctcttcagcctc
ctgaatttcctggagccacagcagttcccctcagagacagccttcctggaggagtttgga
gacctgaagacagaggagcaggtgaagaagctgcagtccatcctgaaacccatgatgctg
cgacggctgaaggatgatgtagagaagaatctggcacccaagcaggagaccatcattgag
gtggagctgaccaatatccagaagaaatactaccgggccatcctggagaagaacttctcc
ttcctctccaaaggtgccaaccagcacaatatgcccaacctcatcaacaccatgatggag
ctgcggaagtgctgcaatcacccatatctcatcaacggggcagaggagaagatcctggaa
gacttccgtaaaacacacagcccggaggcgccggacttccagctgcaggcgatgatccag
gcggccgggaagctggtgctcattgataagctgcttcccaaactgattgccggtggacac
aaggtgctcatcttctcccagatggtgcgctgcctcgacatcctggaagactatctcatt
cagaggcggtacacctatgagcgcattgatggacgggtgcgtgggaacctgcgccaagct
gccatcgaccgcttctgcaagcccgactcagatcgcttcgtctttctcctgtgcacgcgg
gcaggcgggctgggcatcaacctgaccgctgctgacacctgcatcatctttgattcagac
tggaacccacagaacgacctccaggctcaagctcgctgccaccggatcgggcagagcaag
gcagtgaaagtctatcgcctcatcaccaggaactcctacgagcgggagatgttcgacaag
gccagcctgaagctgggcctggataaggctgtgctgcaggacatcaaccgcaagggcagc
accaacggggttcagcagctctcaaagatggaggtggaggacctgttgcggaagggtgcc
tacggtgctctcatggacgaggaggatgaaggatcgaagttctgtgaggaagacattgat
cagatcctccagcgcaggacacagaccatcacgatccagtctgaggggaaaggctccacc
tttgccaaggccagcttcgtagcatccgggaacagaactgacatttccttggatgacccc
aacttctggcaaaagtgggccaagatagcagagctcgatacagatgccaagaatgaaaag
gagagcctggtcatcgacaggccccgggtgcggaagcaaaccaaacactacaactccttt
gaagacgatgagctgatggagttctctgagctggacagtgactcggacgagcgacccaca
cgctcgcggcgcttcaacgagaagacgcggcggtacctgcgggctgagtgcttccgcgtg
gagaagaacctgctcatattcggctggggacgctggaaagatatcctgacccacgggcgg
ttcaagtggcacctgaacgagaaggacatggagatgatttgtcgggccttgctggtctat
tgcgtcaaacactacaagggagatgagaagattaagagttttatctgggatctcatcacg
ccgacgaaggatggccagaaccaggctctgcagaatcactcaggcttgtcagcaccggtg
cccagaggcaggaaagggaagaagacaaagaaccagatgctgcttcccgagataaagaac
gcggactggctggccacctgcaaccccgaggtcgtcctgcatgatgacagctacaagaag
cacctcaaacagcactgcaacaaggttctgctgcgggtgcgaatgctctactacctgaag
gctgaagtgctgggggaggccgcggacaaagccttcgaggggacccccgccagggagctg
gacgtgctgctgccagacattgactacgtggagatcccagtggactggtggaacgctgaa
gctgataaatccctgctcatcggcgtcttcaagcacggttacgagaggtacaatgccatg
cgggcggacccggcactgtgctttctggagaaggtgggcatgccggacgagaagctgctc
tccgcggagcagggcgtcagcgatggggcccaggatgctgccgaaaggggcagcatggac
aaggaagagagcggtggagaaaagctggaggggctgccaaagcaggaggacgtcgtggct
gctggggcgggcgaagccagtgagaagcgggacgaggcagcggcagcccaggatggctcc
gactcagacagatcctgctggcctgtctcatctgccctcacagccagactgcggaggctc
gtcaccgtctaccagcgctgcaaccgcaaagagctgcctccccgcgccgagatgctggtg
cctggtaaccatggatactggctgcaggacgagatgttcaggagagcctctgagatggac
tcggtgaacaaagaaatgcagaaaaggtggaccaggagggagcaggcagatttctaccgc
actgtctcctcctttggggttatctatgaccaggagaaaaagatctttgactgggcccag
ttccgagccatctctcgactggagaagaagacagatgagagcctggagaagtacttctac
agcttcgtggccatgtgcaagaatgtctgtggtctcccactgtggaaagaggacggtccc
ccagaccctgacatctacgtggagcccatcacggaggaacgtgctgccagaaccctctac
cgtatcgagcttctgcgaaaggtgcgcgagcaggtgctcaagtgtccgcagctccacgag
cggctcaagctgtgccggccaagcctctacctgccggtgtggtgggagtgtggcaaacat
gatcgggacctgctgatcggcaccgccaagcatggcctgaatcgcactgactactacatc
atgaatgacccccagctgtcttttttagatgcatacaggaactatgcccagcataaaaga
acggggctcccaggcccagaaaccctgtgctgcctttaccagactaactccaaactctac
agttcccctctctacagccaggtggaccggacctgcgaatccctggagaacgaagccgag
agtcagatcaagctagaaaccatagacagcactatgtcccaggctgggggcagtccgccg
gatgcaaactgtgaaacattcatgtctaaagtccgggacatcatttccagtaactacgat
gagagctctctgccggactcgttggtgtgcatgatgtatgatgagaaggcctgtaacagt
gagcaaagctcccttgcccgagacagcccaagttgcacagatgttggaagcagcgttgct
aaactctccgagggcaaactagagggagatgaggatccgtccagctgcgatgcagatgcc
atgagagagactcccttcctagagggtttgcaggtgggctgtgaccgaacggacagtcgg
aacgaggaagctgagccttcgccttctacccctgaaagcgacccttcgcggagcgcccca
gcagagctctgcgaagccttgcagcagaagggagacctcaccagacctgcgccagttctg
cctgagcacggtgccatggaaggggtcttaagcgtggggctctacagtcccgctcttcat
aactatgaaataaaggttcctcctgagcagaggttcatcagtctgctgcaggagaagggg
atggaggcaaagtcagggccaagtcagagccacagcgaggaagatgaggaggaagaagag
gacgatgataactctgaggcagcagcagatgttgtggaaggcttgagtggtcccaggacc
agggccggttgtgaccccgaggccagtgaacgggggggcgaggagcagagctctggcctc
cccacacccgaggacacttgcccagaagatgtgaatggcgagagagagtccctggggctg
gggacacccgaagggctgggggagcccgggccagagggcagggaggaccgtggcgtggat
gaggagagcaccctgcagcactcaccgggccaggctcagagccaggttttcagcctgcct
gcgcctctgctgggggccccaggggcagagcccccctgtgccgggggggaggcctggggc
cgtggggctgaggggcagacaggctgcagagtcaccctgcaccctgagccccagggggtg
aagcaagaagagtgtgagaacagagaagaggagaaagccagcagcagccagagtcaagac
ggtccagagaagtacctggaggaagagagcaagagttctgcttctgtcctgcccggggag
atcgatgaccttcaggatgcccgggcaccgaccatagcccagctgctgcaggagaagaca
ctttactccttctctgagtggcctaaggaccgtgtgatcatcaaccgcattgacaacatc
tgccatgccatcctgaagggcaagtggccttcctccagccagcagtttgagacacaaagc
ctgctgacggctccagtggtagccagcaatgccggcagcaggaacagctttgccgaatca
gaagccgccgatcccagcttcaataacggggtgttaatctcacaggtacaaaaggaaggt
ttcctgacccctgcctttgcaaaggacgagcggaagcacagacggccctatgaattcgag
atggagagagacgccaaacagcggagcttggagcagctagcagcaacccatgttcatccc
cccatcatgctgaatggctggcgagacgcggcggtggacttgtccagagcctctgatggg
tccccggggaactcctctcctttccccctgaacacaaacatgcccaagctggggaccgtg
aacaccctccagggctccctgggcatggacttgtctggcatcctccaggcagggttaatc
catcctgtcacgggacaaattgtaaacggcagcctccgaagagacgatgctgccatgagg
aggagacggggcaggagaaaaaatgtagaagggatggacctcatcttcttgaaggagagg
cctcttccaaccaggctgcaggatgtgcaggaagaccagccacagcccccccagaccagt
cccctccctgatgggccggttgctgctacctcaactccacagccagtcccagctgcgggc
agccaggcagagaaggctgtcccaaataagagtctcctcgactggctccgtcagcagtcc
gactacacactcgacgttcccggctttggcacaagtttttcagacaagcccaagcagagg
aggcagcgctgcaaggaccccagcaaattggacattaactcactcacgggagaggagcgg
gtgcctgtggtacataagggtaccggacggcggttagggggagccacggcaccagcattg
aaggaattgccaaggtggcttgatgcaaacttggagtatgctgttgcagctgactgggct
gacattgttaagctttcaggctacttaccggagagcaaattcaatcgcatcctaaccgag
cctgtgctccgagacgcggggccgcgccggagggggagaaggccccgaagcgaactcatt
aaaggccccggcattgtagcagattcttcttctggaatgggaccattgttcatgaacgga
ctgattgctgggatggatctagtaggacttcagaacatgagaaacatgcaagggatccct
ctgaccgggctggtggggtttcctgctgggtttgcagcagtgcccgccggcgaggacgtg
aaaagcaccctgagtatgttgcccatgatgctgccgggcatggctaccgtaccgcagatg
tttggcgttggaggacttctcaacccccccatgacaactacttgtactgcgactgctcca
acttcgctaacaagcacaacgaaaagtggtacagccagcgcagagaaagctgctgaggat
aaacagagtagccaggacgtgaaaaaagaaactctctcggaagataagcccggtcctagt
tcgttttctaatcagacagaatctgcaataactaccagtagtcctgtagcttttaacccg
ttccttatcccagggatgtctcctggactgatctatccctcaatgttcctttcccccggc
atcggcatggcgctgcccggcatacagcaaaccaggcactcggaggcagcgaacctggaa
agccagaagcggaagagaaagaaagcgaaaggggaatcggcaaacccagagccagaaact
gtctcgctgccagaaaaagaagctgcgaacagtcaaaactgtacagagcaaacaccgcct
ttgtcggcagagaaagagcaggacggaccagcagcggaggagcgcgaagcggctcgcgat
accaattag
DBGET
integrated database retrieval system
