Grus americana (Whooping crane): 129215046
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Entry
129215046 CDS
T11359
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
game Grus americana (Whooping crane)
Pathway
game03030
DNA replication
game03420
Nucleotide excision repair
game03430
Mismatch repair
game03440
Homologous recombination
game03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
game00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129215046 (RPA1)
03420 Nucleotide excision repair
129215046 (RPA1)
03430 Mismatch repair
129215046 (RPA1)
03440 Homologous recombination
129215046 (RPA1)
03460 Fanconi anemia pathway
129215046 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
game03000
]
129215046 (RPA1)
03032 DNA replication proteins [BR:
game03032
]
129215046 (RPA1)
03400 DNA repair and recombination proteins [BR:
game03400
]
129215046 (RPA1)
Transcription factors [BR:
game03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
129215046 (RPA1)
DNA replication proteins [BR:
game03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
129215046 (RPA1)
DNA repair and recombination proteins [BR:
game03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
129215046 (RPA1)
MMR (mismatch excision repair)
129215046 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
129215046 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129215046
NCBI-ProteinID:
XP_054703576
LinkDB
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Position
19:complement(5578726..5601426)
Genome browser
AA seq
614 aa
AA seq
DB search
MSVRLSEGAIAAIMQGEDVSKPVLQVINTRAIATGNGPPRYRVLMSDGVNTLSSFMLATQ
LNSLVEEERLSAQCICQVNRFIVNSLKDGRRVVILMDLNVLKTADKVGGNIGNPVPYNEG
QGQQRSLPPAANPPPSKPQQQNGNLSVAGPAAPKYHAPSNQFGKVSAPSSVKTPGGSQAK
VVPIASLNPYQSKWTICARVTQKGQIRMWSNSRGEGKLFSIELVDESGEIRATAFNDQAD
KFFPLIELNKVYYFTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFEFV
SISDLENTPKDSIVDVIGICKSYEDVTKITVKANNREVSKRNVHLMDTSGKLVTATLWGN
EAEQFDGSRQPVIAIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLE
CASISDVRGGPASGANTNWKTLFEAKSENLGQGDKADYFSCVGTVVHLRKENCMYQACPS
QDCNKKVIDQQNGLYRCEKCDREFPNFKYRMMLLVTIADCLEYQWVTCFQEAAEFILGQN
ATFLGELKEKNEQAFEEVFQNANFNTYEFRIRVKLETYNDESRIKATAVDVKPVNYREYS
KRLITSIRRNAQLG
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcggctgagcgagggtgccatcgcggccataatgcagggggaggatgtctcc
aagcctgtgctgcaagtcatcaatacacgggctattgctacaggaaatgggccaccgcgt
taccgagtgttgatgagtgatggagttaacacactgtcctctttcatgttggcaacacag
ctgaactctctggtggaagaggaacgcttatcagcccaatgtatttgccaggttaacaga
ttcatcgtcaacagtctgaaagatggaaggagagtggttatactgatggatttaaatgtt
ctgaaaactgctgataaggttggtgggaatattggcaatccagtgccgtacaatgaaggg
caagggcagcaacgttctttgcctccagcagcaaacccaccacccagcaaaccacagcaa
caaaatggcaatttgtcagtagcaggtcctgctgctccgaagtaccatgctccctcaaac
cagtttggtaaagtgagcgctcccagctcagtgaagacaccaggcgggtctcaggccaaa
gtagtgccgattgccagcttgaacccataccaatctaagtggaccatttgtgctcgtgtt
acccaaaaaggtcagatccgcatgtggagcaactcccgtggtgaaggaaagctcttttct
atagagctggttgatgaaagcggtgagattagagctactgcattcaatgatcaagcagac
aagttctttccactcattgaattgaacaaggtatattattttaccaaaggcaatttgaag
actgctaacaagcaatatacagctgttaagaatgactatgagattacattcactaatgag
acttcagttgtgccctgtgatgatgcccagcatcttccatctgttcagtttgagtttgta
tccatctctgacttggagaacacacccaaagactcaattgttgatgtaattggaatttgt
aagagctatgaagatgtcactaaaattacagtgaaagctaacaatagggaggtatcaaag
aggaatgtgcatctgatggatacatcagggaaactggtgacagctacgctatggggaaat
gaggctgaacagtttgatggttctagacaacctgtgatagccatcaaaggagcccgagtc
tctgatttcggtggtagaagcctgtctgtcctctcctcaagtacagttgtcatcaaccct
gatagcccagaggcttttaagctccgaggatggtttgattccgaggggcagcttctggaa
tgtgcctcgatctctgatgtgaggggtgggccagcatctggggcgaacaccaattggaaa
actttgtttgaagccaaatctgagaacttgggacaaggagataaggcggattattttagt
tgtgtgggcacagtcgtacatctgcgcaaagagaactgtatgtaccaggcatgtccctct
caggattgcaataagaaagtgatagaccaacaaaatggactgtatcgttgtgaaaagtgt
gatcgtgaattccccaacttcaagtaccgcatgatgcttctggtgaccattgcagactgt
ctagagtatcagtgggtgacttgtttccaagaggcagcagaattcattcttgggcaaaac
gcaactttcctgggagaactgaaggaaaagaacgagcaggcgtttgaagaagtgttccaa
aatgcaaacttcaacacgtacgagttcaggatccgagtaaaactggagacttacaacgat
gaatctcgtattaaggctacagcagtggacgtcaaacctgtgaactacagagaatacagc
aagaggctgatcacaagcatcaggagaaatgctcagctagggtga
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