Grus americana (Whooping crane): 129215174
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Entry
129215174 CDS
T11359
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
game Grus americana (Whooping crane)
Pathway
game04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
game00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
129215174 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
game04121
]
129215174 (RNF43)
Enzymes [BR:
game01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129215174 (RNF43)
Ubiquitin system [BR:
game04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129215174 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
KIAA1549
zf_RING_Vps8_fungal
zf-C3HC4_3
DUF5305
Motif
Other DBs
NCBI-GeneID:
129215174
NCBI-ProteinID:
XP_054703845
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All DBs
Position
19:complement(771780..834072)
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AA seq
832 aa
AA seq
DB search
MSAGPQLQLAVLWPWLLMATLKAGLGHTGLALAAAVESERSAAQKAIIRVIPLKVEPIIL
EGEFANVAEVTPAEGKLLQSHPLSLCNTSEDEHTESGFITIVKLEQPDRDPNPCLSLANK
AKLAGERGARAILFDITDDESAADQLRKPRGLSQPVVLIRGHDAELLMGVVNKNREAHVK
IEVKEPPAWPDYDVWILLTVVSTVVVIILIFVVRTKCQLNRSQDSLQQQTMQAIGQLATR
KYQARCRQASRWDSASSCSSAPVCAICLEEFSEGQELRIISCSHEFHQECVDPWLQQHHT
CPLCMFNILARDSVDQATAAGSRLAPRDMEPGRRLHLFRQHPGHALYHLPHAYPQRNLRS
FPLEPAHGNPFFHSPELSQLDVNTIHYMPYRPATSLPACSHPSPLAPGLLGQQHPNPSAC
GQTLPPHRTCSLQPQPPCLGLKTALAQKQHRAPALRRGVGHGHQHNSSGSGESYLTEHSG
YLADGPGSDSSSGPCHGSSSDSMLNCTDVSLQGIHGSCSTFRSSLSSDYDPFVYCSSEGP
ATDNGQEQPRPPREMRPRSLDLMVPGGAAPAKPQVLSHVHYHHHQHHHYRRDADCPPGRA
GPGPGQRKSRYSGAKVGFHGARTQKRTEKSHHCQQPLESSTVLQEAALAGQPACPQKGRE
APHATSASPNRLDFSVDATRQSGAAGTSPVPLLPRHSLQSRHHRRKRKCPLEPDPALLPE
DSALPKACDAHVPHGHPAGYRCSPEVQPLIPSTPLPCSSGSRPLWKCLVPQSGSELKKQE
EGLSGREGNRTVPDFSGMGTPRHGLSLHLHCPSQQGGQGSEQEVQDVHEHSV
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctggcccccagctgcagctggctgtcctctggccttggctgctcatggcgacc
ctgaaggcaggacttggccatacagggctggcgctggcggcggcggttgagtcggagagg
tcggcagcgcagaaagccatcattagggtgatccccctgaaagtggagccaatcatactg
gaaggggagtttgcaaacgttgctgaggtgactccagccgaaggaaaactgctccagtcc
cacccactgtccctgtgcaacaccagcgaggatgaacacaccgaatcgggattcatcacc
attgtcaagcttgaacagccggatcgggatcccaacccttgcctgtcgctggcgaacaag
gcaaagctggcgggggagcgtggagcccgtgcgatcctttttgacattacggatgatgaa
agcgctgctgatcagctgagaaagcccagaggtctgagtcagcccgtggttctaatcagg
ggccacgatgctgagcttctcatgggtgtcgtgaacaagaacagagaggcccatgtgaag
atagaagtcaaggagccaccagcttggccagactacgacgtgtggattcttctcacggtg
gtcagcactgtcgttgtcatcattttgatttttgttgtccgcaccaagtgccaactgaac
aggagtcaggactccttgcagcagcagaccatgcaggccatcgggcagctggccacgcgc
aagtaccaggcaaggtgccggcaggcatcgcggtgggactcggccagcagctgcagctca
gccccggtctgtgccatttgcctggaggagttcagcgagggccaggaactgcggatcatc
tcgtgctcccatgagtttcaccaggagtgtgttgacccctggctgcaacaacatcacacg
tgtccgctttgcatgttcaatattcttgccagagattcagtggaccaggccacggccgca
ggctccaggctggcccctcgggacatggagcccggacggcgactccaccttttccgccag
cacccgggacatgccctttaccacctcccacatgcgtatcctcagaggaacctcaggagc
ttccccctggagccagcccacggcaaccccttcttccactctccagagctctcccagctg
gatgttaacaccatccactacatgccctacaggccagccacctccctgcccgcctgcagc
cacccgtcccccctggccccgggtttgctgggccagcagcaccccaacccctcggcgtgt
gggcagacactgccaccccacaggacttgttctctccagccccagcccccctgcctgggg
ctcaagacagccctggcgcagaagcagcaccgtgcacccgccctgcgccggggggttggc
cacgggcaccagcacaacagcagtggctctggggagagctatctcacggagcacagtggg
tacctggcagatgggccgggcagtgactccagctcagggccctgccacggttcctccagt
gactccatgttgaactgcacggatgtcagtctgcagggcatccacggcagctgctccact
ttccgcagctccctcagcagcgactatgacccctttgtgtactgcagctcggaggggccc
gccacggacaacggccaggagcagccgcggccaccaagggagatgcggcccaggtcgttg
gacctgatggtgcctgggggtgctgctccggccaagccccaggtgctcagccatgtccac
taccaccaccaccagcaccatcactacagaagagacgcagactgcccgcctgggcgggcc
gggccggggcccgggcagcgcaaatcccgatactctggggccaaggttggcttccatggt
gctcggacacaaaagaggactgagaaaagccatcactgtcagcagcctctggaaagcagc
actgtgctacaggaggcagctctggcaggacagcccgcctgtccccagaaaggccgggag
gcccctcatgccacctctgcttctccaaacaggctggacttcagtgtagatgccaccaga
caatcgggagcagctggcacatcccccgtcccgctgctcccaagacacagcttacagagc
cgtcatcaccgaaggaaaagaaagtgtcccctggagcctgaccctgctctcctgcccgag
gactcagccttgcccaaagcctgtgatgctcacgttcctcacggccatcccgctggctac
cgctgctcacctgaagtccagcccctgatcccaagcactcccctgccctgcagctcaggc
tctcggccgctctggaagtgtttagtgccacagtccggctcagagctgaaaaagcaggag
gaggggttgtcaggacgggagggaaaccgcacggttcctgatttttcagggatgggcacc
cccagacacggtctgagtcttcaccttcactgcccgtctcagcagggtggtcagggatct
gaacaggaggtccaggatgtccatgaacactcagtttaa
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