Grus americana (Whooping crane): 129215299
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Entry
129215299 CDS
T11359
Symbol
TRIM50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
game Grus americana (Whooping crane)
Brite
KEGG Orthology (KO) [BR:
game00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
game04121
]
129215299 (TRIM50)
Ubiquitin system [BR:
game04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129215299 (TRIM50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
PRY
zf-B_box
zf-C3HC4
TRIM_CC
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
RING_XB3-XBAT31
zf-Nse
zf-RING_4
U-box
Sina_RING
Vps53_N
zf-ANAPC11
ATG17_like
CRLF3_N
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
129215299
NCBI-ProteinID:
XP_054704094
LinkDB
All DBs
Position
19:459046..465671
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AA seq
495 aa
AA seq
DB search
MARKMSIDELEDQLLCPICLEVFKEPLMLQCGHSYCKSCVVSLSGELDGQFLCPVCRQTV
DCSASPPNVTLARVIEALQSRVEAEPTPESCPTHHNPISLFCEADQEVICGLCGTIGNHR
QHKITPISTAYCRMKEELSVLLTDVHQYKRNLDEHFSKLINNKSRIANEADVFKWVIRKE
FQELHRYIDEEKATFLESIEGKAAQLITSIESQVKQTSDALQRLKEMQTSLEALSNESQL
DFIRKYGSSQFRSELPSLHPSDGIFSPVSFKPCFHQDDIKMTVWKRLQRRVLPAPETLKL
DPVTAHPLLELFKGDTVVQCGLYQRRDSNPKRFDSSNCILTCKGFSCGQHYWEVIVGTRN
HWRVGIIKGTVSRKGKLSKSPENGVWLIGLKEGKVYEAFSTPRAALPLTARPQRIGIYLH
YEKGELTFYNADHPDELSPIYTFQAEFQGQLYPIVDLCWPERGPYSPPIILPAPATSRHP
RVPYNHPAPEEPTKP
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcaagatgagcatcgatgagctggaggaccagctcctctgtcccatctgcttg
gaggtcttcaaggagcccctgatgctgcagtgtgggcactcatactgcaagtcctgcgtg
gtgtcactctccggagagctggacgggcagttcctgtgccccgtgtgccgccaaacagtg
gactgcagcgcctcgccacccaacgtcacgctggcccgcgtcattgaggcgctgcagagc
cgggtcgaggcagagcccaccccagagtcctgcccaacgcaccacaaccccatcagcctc
ttctgtgaggccgaccaagaggtgatctgcggactgtgcggcaccatcggcaaccaccgc
cagcacaagatcacccccatctctaccgcgtactgtcggatgaaggaggagctgtctgtg
ctgctgaccgatgtccaccagtataagaggaacctggatgaacacttcagcaagctcatc
aacaacaaaagccgcatcgcaaacgaggcggatgtcttcaagtgggtgatccggaaggaa
ttccaggagctgcacaggtacatcgacgaggagaaagccaccttcctggagagcatcgag
gggaaggcagcccagctcatcacctccattgagtcccaggtcaagcagacgtcagacgcc
ctgcagaggcttaaggagatgcagacctctctggaggcactcagcaacgaaagccagctt
gattttatccggaaatatggctcctcccagttcaggtcagagctccccagcctgcacccc
agcgatggcatctttagccctgtgtccttcaagccgtgtttccaccaagacgacatcaag
atgaccgtgtggaagcgcctgcagcgccgtgtcctgccagctccagagacgctgaagctg
gacccagtgacagcacatcccctcctggagctcttcaagggcgacacagtggtgcagtgt
gggctgtaccagcgccgggacagcaaccccaagcgtttcgactccagcaactgcatcctc
acctgcaagggcttctcctgcggccagcactactgggaggtgattgtgggcaccaggaac
cactggcgcgtgggcatcatcaagggcacggtcagccgcaaagggaagctcagcaagtct
cccgagaacggcgtgtggctcatcggcctgaaggaagggaaggtctatgaggccttcagc
actccacgggccgccctgccgctgactgcccggccccagcgcattggcatctacctgcac
tacgagaagggcgagctgaccttctacaacgccgaccaccccgacgagctcagccccatc
tacaccttccaggcggagttccagggccagctctaccccatcgtggacctgtgctggcca
gagcgagggccctactcgccccccatcatcctgcccgcgcctgccacaagccggcacccc
cgcgtgccgtacaaccatcctgccccagaggaacccacgaagccgtag
DBGET
integrated database retrieval system
