Gordonia amicalis: IHQ52_00610
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Entry
IHQ52_00610 CDS
T08222
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
gami
Gordonia amicalis
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gami03021
]
IHQ52_00610
Transcription machinery [BR:
gami03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IHQ52_00610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_IclR
KORA
HTH_23
MarR
HTH_24
HTH_Crp_2
Sigma70_ECF
DUF7343
Crp
MarR_2
HTH_3
HTH_Tnp_ISL3
HTH_31
GerE
HTH_AraC
YdaS_toxin
HTH_38
HTH_37
HTH_28
VCPO_N
UPF0122
Motif
Other DBs
NCBI-ProteinID:
UKO91979
LinkDB
All DBs
Position
complement(131440..132249)
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AA seq
269 aa
AA seq
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MAAQERAEHDDYSDVLPILREIRSERDDDLRAKKRDEVIERCLPLADHVARRFSDRGEPV
DDLRQVARIGLMHAVDRFDVERGNNFLAFAVPTVMGEVKRYFRDSTWSIRVPRRAQEASL
NIAKASEELLQSLGRSPRPSEIAEHLGLPVSEVIEGMVARSAYTASSIDAEAGSSTDGWT
LADTLGDEDERLDMIEEFVTLQPALKRLTERERTILTLRFFRSMSQSEIARHVGISQMHV
SRLLTRILDTLREEVADDDEYEEPLLKHA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacaagaacgcgccgagcacgacgattacagcgacgtcctcccgatactgcgt
gagatccgcagtgaacgcgacgacgacttacgtgcgaaaaaacgcgacgaagtgatcgag
cggtgtctaccgctcgccgatcacgtcgcacgacggttctccgatcgtggcgaaccggtc
gacgatctccgccaggtggcgcggatcggtctcatgcacgcagtagacagattcgatgtc
gagcgtggcaacaatttcctcgccttcgccgtcccgacggtgatgggcgaggtcaagagg
tatttccgtgacagcacgtggtcgatcagagtgccacgccgtgcgcaggaggcctcactc
aacatcgcaaaggccagcgaggagctgttgcagtccctcggtaggtcgccgcgaccgagt
gagatcgccgagcacctcggactaccggtcagcgaggtcatcgaagggatggttgcgcgg
tcggcgtacacagcgagttccattgatgccgaggcgggttcgtccaccgacggctggacg
ctcgccgacacgctgggcgacgaggacgagcgactcgacatgatcgaggagttcgtgacc
ctccagccggcgctcaagcggctcaccgaacgcgaacggacgatcctcaccctgcggttc
ttccgttcgatgtcccagagtgagatcgcccggcacgtcgggatctcacagatgcatgtg
tcgaggcttctcacccggattctcgacacgctgcgtgaagaggttgccgacgacgacgag
tacgaggagcccctgctcaagcacgcgtaa
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