Gordonia amicalis: IHQ52_03400
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Entry
IHQ52_03400 CDS
T08222
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
gami
Gordonia amicalis
Pathway
gami00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IHQ52_03400 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gami01007
]
IHQ52_03400 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gami03016
]
IHQ52_03400 (serS)
Enzymes [BR:
gami01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
IHQ52_03400 (serS)
Amino acid related enzymes [BR:
gami01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
IHQ52_03400 (serS)
Transfer RNA biogenesis [BR:
gami03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
IHQ52_03400 (serS)
Prokaryotic type
IHQ52_03400 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
UKO92467
LinkDB
All DBs
Position
complement(736578..737837)
Genome browser
AA seq
419 aa
AA seq
DB search
MIDLKIVRDDPDLVRTSQRTRGEDPGLVDALLDADAARRAAIVDADTLRSEQKALGKQVG
KAQGDEKQALLAKGKELAEQVKAAVARQSAADEAAAKAHRAISNIVAPEAPAGGEDDYIV
LEHVGEPREIENAKDHLELGESLGLFDMERGAKVSGSRFYFLTGQGAFLQLGLLNMAAQK
AAANGFTLMVPPVLVRPEVMEGTGFLGSHADEVYHLDKDDDLYLVGTSEVPLAGYHMDEI
LDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEGFIYCKPEDAEAEHRRLLG
WEKDMLAAIDVPYRVIDVAGGDLGSSASRKFDCEAWVPTQNTYRELTSTSNCTTFQARRL
SIRYRDENGKPQIAATLNGTLATTRWLVAILENHQQPDGSVKLPAELAKFVGTDVLTPR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacctgaagattgttcgtgacgacccggatctggtccgcacttcgcagcgcacg
cgcggcgaggaccccggcctggtggatgctctgctcgatgccgatgcggcccgtcgtgcg
gccatcgtcgacgccgacacgttgcgatccgagcagaaggctctcggcaaacaggtcggc
aaggcgcagggcgacgagaagcaggcgctgctcgccaagggcaaggagctcgccgagcag
gtgaaggccgcagtcgcgcgccagtccgcggccgacgaggccgccgcgaaggcacatcgt
gcgatctccaacatcgtcgctccggaggcacccgccggcggcgaggacgactacatcgtc
ctcgaacacgtcggggagccccgcgagatcgagaacgcgaaggaccacctcgaactcggt
gagtcactcggtctgttcgacatggagcgcggcgcgaaagtgtcgggctcgcggttctac
ttcctcaccgggcagggcgccttcctgcagctgggcctgctgaacatggccgcgcagaag
gctgcggccaacggtttcacgctgatggtcccgcccgtcctggtgcgtccggaggtcatg
gagggcaccgggttcctcggctcccacgccgacgaggtctaccacctcgacaaggacgac
gacctgtacctcgtcgggacctcggaggtaccgctcgccggttaccacatggacgagatc
ctggacctgtccgacggcccgaagcggtacgccggctggtcgacgtgcttccgccgtgag
gccggcagctacggcaaggacacccgcggaatcatccgcgtgcaccagttcgacaaggtc
gagggcttcatctactgcaagcccgaggacgccgaggccgagcaccggcgactgctgggc
tgggagaaggacatgctggccgcgatcgacgtgccgtaccgcgtcatcgatgtcgccggt
ggcgacctcgggtcgtcggcgtcgcgcaagttcgactgtgaggcatgggttcccacccag
aacacctaccgggaactcacctcgacgtcgaactgcaccaccttccaggcccgccgtctc
tcgattcgctaccgcgacgagaacgggaagccgcagatcgcggcgacgctcaacggcacg
ctggccaccacgcgctggctggtggccatcctggagaaccaccagcagcccgacggttcg
gtgaagctgcccgccgagctcgcgaaattcgtcggtaccgacgtcctcacccctcgctga
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