Gordonia amicalis: IHQ52_04155
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Entry
IHQ52_04155 CDS
T08222
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
gami
Gordonia amicalis
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gami03032
]
IHQ52_04155 (gyrB)
03400 DNA repair and recombination proteins [BR:
gami03400
]
IHQ52_04155 (gyrB)
Enzymes [BR:
gami01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
IHQ52_04155 (gyrB)
DNA replication proteins [BR:
gami03032
]
Prokaryotic type
DNA Topoisomerases
IHQ52_04155 (gyrB)
DNA repair and recombination proteins [BR:
gami03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IHQ52_04155 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
UKO92600
LinkDB
All DBs
Position
complement(904686..906752)
Genome browser
AA seq
688 aa
AA seq
DB search
MADTNDTGPKKSKKKPSEYGADSINILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNS
VDEAMAGFASRVDVTLLEDGGVQVVDDGRGIPTGMHRTGVPTVEVVMTQLHAGGKFDSDA
YAVSGGLHGVGISVVNALSTKVELEIANDGFNWEQTYSYAKPGPLEKGDATRKTGTTVRF
WPDPEIFTETTRFNAETVARRLQEMAFLNKGLTITLTDQRPQAVEAPGDANGDDEAAPTT
EVAETVKTETEKAAAAAKPKTRTYHYPDGLVDYIKHLNRTKQSIHTTVIGFNAKGEGHEV
EIAMQWNAGYSESVHTFANTINTHEGGTHEEGFRAALTSTVNKYALEKKLIKEKDGKLTG
DDIREGLAAVISVKVADPQFEGQTKTKLGNTEIKGFVQRTCNEHLGHWFEANPAEAKIII
KKAADSAQARMAARRAREMVRRKTATDIGGLPGKLADCRSNDPTKCEVYIVEGDSAGGSA
KSGRDSMYQAILPLRGKIINVEKARIDRVLKNAEVQSIITAFGTGIHDEFDISKLRYHKI
VLMADADVDGQHISTLLLTLLFRFMRPLIEHGHVFLAQPPLYKLKWQKSAPEFAYSDRER
DGLLEAGRAAGKKINSDDGIQRYKGLGEMNAKELWETTMDPAVRVLRQVTLDDAAAADEL
FSILMGEDVAARRSFIARNAKDVRFLDV
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacaccaacgacaccggacccaagaagagcaagaagaagccgtcagagtacggc
gccgactcgatcaacatcctcgaaggtttggaagccgtccgcaaacggcccggcatgtac
atcggttccaccggtgaacgcggcctgcaccatctgatctgggaggtcgtcgacaactcg
gtcgacgaggcgatggccggcttcgcaagccgcgtcgacgtcacgctcctcgaggacggc
ggcgtccaggtcgtcgacgacggtcgtggcatcccgaccggcatgcaccggaccggcgtt
cccaccgtcgaggtcgtcatgacccagctgcacgccggcggcaagttcgactccgatgcc
tacgcggtgtccggtggtctgcacggcgtcggcatctcggtggtcaacgcgctgtcgacc
aaggtcgagctcgagatcgcgaacgacggcttcaactgggagcagacctactcctacgcc
aagccgggtcccctggagaagggcgacgccacccgtaagaccggtacgacggtgcggttc
tggccggacccggagatcttcaccgagaccacccggttcaacgccgagaccgtggcgcgg
cgtctgcaggagatggccttcctcaacaagggtctgaccatcacgctgaccgaccagcga
ccccaggccgtcgaggcgccgggcgatgccaacggcgacgacgaggccgccccgaccacc
gaggtcgccgagacggtcaagaccgagaccgagaaggccgcggccgcggcgaagccgaag
acgcgcacgtaccactacccggacgggctcgtcgactacatcaagcacctcaaccgcacc
aagcagtcgatccacaccaccgtcatcgggttcaacgccaagggcgaggggcacgaggtc
gagatcgcgatgcagtggaacgccggttactcggagtcggtgcacaccttcgccaacacg
atcaacacccatgagggcggcacccacgaagagggcttccgtgcggcgctgaccagcacg
gtcaacaagtacgcgctcgagaagaagctgatcaaggagaaggacggcaagctcaccggc
gacgacatccgcgagggtctcgccgcggtgatctcggtgaaggtcgccgatccgcagttc
gagggccagacgaagaccaagctcggcaacaccgagatcaagggcttcgtccagcgcacc
tgcaacgagcacctgggtcactggttcgaggcgaatcccgccgaggccaagatcatcatc
aagaaggccgccgactccgcacaggcccgcatggcggcgcgtcgtgcacgagagatggtg
cgccgcaagaccgcaaccgacatcggcggcctccccggcaagctcgccgactgccgcagc
aacgacccgaccaagtgcgaggtctacatcgtggagggcgactcggccggcggtagcgcc
aagtccggtcgcgattcgatgtaccaggcgatcctcccgctgcgcggcaagatcatcaac
gtcgagaaggcccgtatcgatcgcgtcctcaagaacgccgaggtccagtcgatcatcacc
gccttcggcaccggcatccacgacgaattcgacatctccaagctgcgctatcacaagatc
gtgctgatggccgacgccgacgtggacggccagcacatctcgacgctgctgctgacgctg
ctgttccgtttcatgcgtccgctcatcgagcacggtcacgtgttcctggcgcagccgccg
ctgtacaagctcaagtggcagaagtcggctccggagttcgcctactccgatcgcgagcgc
gacggcctgctcgaggcgggccgtgcggccggaaagaagatcaacagcgacgacggcatc
cagcgctacaagggtctcggcgagatgaatgccaaggaactgtgggagaccaccatggat
ccggcggtgcgcgtcctccgccaggtgacgctcgacgacgccgctgccgccgacgaactg
ttctccatcctcatgggtgaggacgtcgccgcacgtcgaagcttcatcgcccgtaacgcg
aaagacgttcgtttccttgatgtctga
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