Gordonia amicalis: IHQ52_04605
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Entry
IHQ52_04605 CDS
T08222
Symbol
dinB
Name
(GenBank) DNA polymerase IV
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
gami
Gordonia amicalis
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gami03400
]
IHQ52_04605 (dinB)
Enzymes [BR:
gami01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IHQ52_04605 (dinB)
DNA repair and recombination proteins [BR:
gami03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
IHQ52_04605 (dinB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH
IMS_HHH_1
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
UKO92681
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All DBs
Position
1009249..1010457
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AA seq
402 aa
AA seq
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MRIERRERQEATILHADLDSFYASVEQRDDPSLRGRPVLVGGGVVLAASYEAKARGVRSP
MPGHEARALCPDAVVVRPRFDAYMEASREVFDIFHDTTPVVEGISVDEAFLDVGGLGRIS
GTPHDIASTIRVRVREEVGLPITVGGARSKFLAKVASAVGKPDGLLIVAPGTELAFLHPL
PVRRLWGVGPVTESKLHDAGVETVGQLAAMGERSLRAVVGSGAGRHLFALSMAQDPRRVE
TGKRRSSIGSQRALGRRPKSEADLEATIVAIVERLGKRLRTAERVCRTVVLRLRFDDFAR
ATRSRTLPEPTDRTDLIMASARGLLADAMPIIRERGCTLVGLSLTNLDDHDNIQLTLPFD
TDHAEQLDATMDLLRDRFGRDSVTRAVLIGRHHGDDAPMLPD
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcgagcggcgggagcggcaggaggcaacgatcctgcatgccgatctcgactcc
ttctacgcatcggtggagcaacgggacgacccgtccttgcgcggtcgcccggtgctggtc
ggcgggggagttgtgctggccgcgagctacgaggcgaaggcgaggggggtgcggtcgccg
atgcccggtcacgaggctcgggcgctgtgccctgatgccgtggtcgtccggccccggttc
gacgcctacatggaggccagccgcgaggtcttcgacatcttccatgacaccactccggtg
gtcgagggcatctcggtcgacgaggcattcctcgacgtcggcggcctgggccggatcagc
gggaccccgcacgacatcgcctcgacgatccgggttcgagtgcgtgaggaggtcggcctg
ccgatcaccgtcggtggtgcgcgcagcaagttcctggcgaaggtggcgagcgccgtcggc
aagcccgacggtctgctgatcgtcgcgcccggcaccgagctcgcgtttctccatcccctg
ccggtgcgtcggctgtggggcgtcgggccggtgacggagtccaagctgcacgacgccgga
gtcgagaccgtcggtcagctggccgcgatgggtgagcgatcgctacgcgcggtcgtcgga
tcgggcgcgggacggcacctgttcgccctctcgatggcgcaggacccgcgtcgggtcgag
accggtaagcgccggtcctcgatcggttcgcaacgcgcgctcgggcgtcggcccaagtcc
gaggccgacctcgaggcgaccatcgtggcgatcgtcgaacgcctcggtaagcggttgcgg
acggccgagagggtctgtcgcacagtcgttctgcggctgcgtttcgatgacttcgcccgc
gcgacccgctcccgcaccctccctgagcccaccgaccgcaccgacctcatcatggcgtcg
gcgcgtggcctcctcgccgacgcgatgccgatcatccgggagcgcggctgcactctcgtc
ggattgtcgctgaccaacctcgacgaccacgacaacattcagctgaccctgccgttcgac
accgatcatgccgaacagctcgacgccacgatggatcttctgcgcgaccggttcggccgg
gattcggtcacccgcgccgtgctgatcggccgtcaccacggcgacgacgccccgatgctc
cccgattag
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