Gordonia amicalis: IHQ52_05555
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Entry
IHQ52_05555 CDS
T08222
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
gami
Gordonia amicalis
Pathway
gami00730
Thiamine metabolism
gami01100
Metabolic pathways
gami01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
IHQ52_05555 (thiC)
Enzymes [BR:
gami01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
IHQ52_05555 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
UKO92848
LinkDB
All DBs
Position
complement(1212879..1214570)
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AA seq
563 aa
AA seq
DB search
MGTRVSTTPTTATFEDGGLTTGPIEGSSKHYLAVDHLRVPQRRIHLTNGEHLDVYDTSGP
YTDTETEIDVERGLPKTRDSWHRPEPIDGASTQLAWARAGIITDEMRFIAAREGADAELV
RSEVAIGRAVIPANHRHPESEPMIIGKRFAVKINANIGNSAVRSSIADEVEKMVWATRWG
ADTIMDLSTGADIHTTREWILRNSPVPVGTVPIYQALEKVNGDPVALTWEIYRDTVIEQA
EQGVDYMTVHAGVLLRYVPLTARRVTGIVSRGGSIMAAWCLAHHEESFLYTHFDELCEIF
RRYDITFSLGDGLRPGSIADANDEAQFAELRTLGELTTIAKSHGVQVMIEGPGHIPMHKI
AENVRLEEELCEEAPFYTLGPLATDIAPAYDHITSAIGAAMIAQAGTAMLCYVTPKEHLG
LPDRDDVKVGVITYKIAAHSADLAKGHPRAQERDDALSKARFEFRWIDQFNLALDPDTAR
EYHDETLPAEPAKTAHFCSMCGPKFCSMRISADVRAYAEENNLVTAEDIDRKIAEGMAAK
SAEFAEGGNRVYLPLETSRGGSA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgggcacacgtgtatccaccacacccaccactgcaaccttcgaagacggcggactgacc
acgggaccgatcgagggcagttccaagcactacctcgccgtcgatcatctccgcgtaccg
cagcgtcggatccacctcaccaacggcgaacacctcgacgtctacgacacctcgggtccg
tacaccgacaccgaaaccgagatcgatgtggagcgcggactgccgaagacccgcgactcg
tggcaccgcccggaaccgatcgacggcgcgagcacccagctcgcgtgggcacgagcgggg
atcatcaccgacgagatgcggttcatcgccgcgcgtgagggcgccgacgccgaactcgtc
cgctccgaggtggccatcggtcgcgcggtgatcccggccaaccatcgtcaccccgaatcg
gagccgatgatcatcggcaagcggttcgcggtgaaaatcaatgcgaacatcgggaattcg
gcggtgcgcagctcgatcgccgacgaggtcgagaagatggtgtgggcgacgcgttggggc
gccgacaccatcatggacctctcgaccggcgcggacatccacaccacgcgcgagtggatc
ctgcgcaactcccccgtaccggtcggcaccgtgcccatctatcaggcactcgagaaggtg
aacggcgatcccgtcgccttgacgtgggagatctaccgcgacaccgtgatcgagcaggca
gagcagggcgtcgactacatgacggtgcacgccggggtcctgctccgctacgttccgctg
accgcccgccgggtcaccggaatcgtctcccgaggcggttcgatcatggccgcctggtgt
ctggctcaccacgaagagtcgttcctgtacacgcacttcgacgaactgtgcgagatcttc
cgccgctacgacatcaccttctccctcggcgacggactacggccggggtcgatcgcggac
gccaacgacgaagcccagttcgccgaactgcgcaccctcggcgaactcaccaccatcgcc
aaatcccatggcgtgcaggtgatgatcgagggacccggacacatcccgatgcacaagatc
gccgagaacgtgcgcctggaggaagaactctgcgaagaggcacccttctacaccctgggc
cccctggccaccgacatcgcacccgcctacgaccacatcacctccgcgatcggtgcggcg
atgatcgcccaggcgggaacggcgatgctctgttatgtgacacccaaggagcatctcggg
ctgcccgaccgcgacgacgtgaaggtcggcgtcatcacgtacaagatcgcggcccactcc
gcagacctcgccaaggggcatccccgggcgcaggaacgtgatgacgcattgagcaaggcg
cgcttcgagttccgctggatcgaccagttcaacctcgccctggacccggacaccgcccgc
gagtaccacgacgagaccctgccggccgaacccgcgaagacagctcacttctgctcgatg
tgtggtcccaagttctgctcgatgcggatctccgccgacgtgcgcgcctacgcggaggag
aacaacctggtgaccgccgaggacatcgaccgcaagatcgccgagggcatggcggcgaag
tcggccgagttcgccgagggcggcaaccgcgtgtacctgcccctcgagaccagtcgaggc
ggttccgcgtga
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