KEGG   Gordonia amicalis: IHQ52_05680
Entry
IHQ52_05680       CDS       T08222                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
gami  Gordonia amicalis
Pathway
gami03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:gami00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    IHQ52_05680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gami03400]
    IHQ52_05680
Enzymes [BR:gami01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     IHQ52_05680
DNA repair and recombination proteins [BR:gami03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     IHQ52_05680
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: UKO92871
LinkDB
Position
complement(1245898..1246683)
AA seq 261 aa
MRFATWNVNSIRARSESVVAWMEQADIDVLAMQETKCHDDAFPLMSFLAAGYDVAHIGQG
AYNGVAIASRVGLDGIEIAFDGVPTYPVDNQPIREARAISAVCAGVRVWSLYVPNGRTPD
DPHYEYKLRWLDALGDHIALRLAHDPAVEMMLAGDWNVAQTDDDVWDREYFEGRTHVTPP
ERAAVQRFLDGGLVDSALPYAPGYTFWDYTQLRFPRDEGMRIDYAFCSPALDTRVMGAHI
DREARKRKGASDHAPVVFDLA
NT seq 786 nt   +upstreamnt  +downstreamnt
atgcgcttcgccacctggaacgtcaattcgattcgggcgcgatcggagtcggtcgtcgcg
tggatggagcaggccgacatcgacgtgctggcgatgcaggagacgaagtgtcacgacgac
gcgtttccgctgatgagtttcctggccgccggttacgacgtggcacacatcgggcagggc
gcctacaacggggtcgcgatcgcgtcgcgggtcggcctggacggcatcgagatcgccttc
gacggcgtgcccacctatccggtcgacaaccagccgatccgcgaggctcgcgcgatctcc
gcggtgtgcgccggggtgcgcgtgtggagtctgtacgtccccaacggacgtacgcccgac
gatccgcactacgagtacaaactgcgctggctcgacgcgctcggtgaccacatcgcactg
cggctggctcacgatccggccgtcgagatgatgctggccggcgactggaacgtcgcccag
accgacgacgacgtctgggaccgcgaatacttcgagggacgcacccatgtcacacctccg
gaacgcgcagcggtgcagcgcttcctggacggcggtctggtcgactccgcgctcccctac
gcccccggttacacgttctgggactacacacagttgcgcttcccgcgcgacgagggcatg
cgtatcgactacgcgttctgttcacccgcgctcgacacacgcgttatgggcgcgcacatc
gaccgcgaggcgcggaaacgcaagggcgccagcgatcatgccccggtggtgttcgacctc
gcttga

DBGET integrated database retrieval system