Gordonia amicalis: IHQ52_05705
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Entry
IHQ52_05705 CDS
T08222
Name
(GenBank) ribonuclease N
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
gami
Gordonia amicalis
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gami03019
]
IHQ52_05705
03016 Transfer RNA biogenesis [BR:
gami03016
]
IHQ52_05705
Enzymes [BR:
gami01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
IHQ52_05705
Messenger RNA biogenesis [BR:
gami03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IHQ52_05705
Transfer RNA biogenesis [BR:
gami03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
IHQ52_05705
Prokaryotic type
IHQ52_05705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
DUF6215
GEMI5_RBS
DUF3810
Dicty_REP
TFIIF_alpha
CLN3
FliP
Kei1
Motif
Other DBs
NCBI-ProteinID:
UKO92876
LinkDB
All DBs
Position
complement(1250353..1250982)
Genome browser
AA seq
209 aa
AA seq
DB search
MARRSRSRSTPSVAQRRRQAAITVAAFVIIGLVFAITWFINNSRDSSADDMRTAAASSTT
KATKSKASKAATTTKTTTIRTTTTKTSRPKTSTARTATKTSRASKTSKTPAPASIPAHVT
RTLAYIDAGEWPEAARAPGTKGGMTFRNNEGHLPATDANDRRITYREWDVNPKAPNRGRD
AERIVTGSDGSAWYTADHYRSFIQIRGPS
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgttcacgttcccgttcgacgcccagcgtcgcccagcgccggcggcaggcc
gcgatcaccgtggccgcgttcgtgatcatcgggctcgtcttcgcgatcacgtggttcatc
aacaacagccgcgactcgagcgcggacgacatgcgtacggctgcggcgtcgtccacgacc
aaggccacgaagtccaaggcatcgaaggccgcgaccacaaccaagacgaccacaatcagg
acgaccaccaccaagacgtcgaggccgaagacgtccacggcccggacggcgacgaagacc
tccagggcgtcgaagacctcgaaaacacctgctcccgcatcgattccggcgcacgtcacc
cgcacgctggcgtacatcgacgcgggcgaatggcccgaggccgcccgggcgccgggcacg
aagggcggaatgaccttccgcaacaacgagggtcatctcccggccaccgacgcgaacgac
cgccggatcacataccgagagtgggacgtgaatcccaaggcccccaaccgcggccgggat
gccgagcggatcgtcaccggcagtgacggttccgcctggtacaccgccgaccactaccgc
tcgttcatccagatccgaggaccgtcatga
DBGET
integrated database retrieval system
