Gordonia amicalis: IHQ52_09270
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Entry
IHQ52_09270 CDS
T08222
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
gami
Gordonia amicalis
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gami03400
]
IHQ52_09270
Enzymes [BR:
gami01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
IHQ52_09270
DNA repair and recombination proteins [BR:
gami03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
IHQ52_09270
Prokaryotic type
IHQ52_09270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UKO93467
LinkDB
All DBs
Position
2009637..2011001
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AA seq
454 aa
AA seq
DB search
MWLRRDLRLSDLPALAAARGTDSSVLLCFVVDPRLEKSSGERRLAFLFDSLREVDAKLDG
RLLVVRGRPEEEIPRLARAVGAGSVHISGDFSPFGRRRDEAVDEALGDTPLEATGSPYLV
SPGRVTKDDGEPYKVFTPYFRRWRDHGWRKPADSSVPDSAVLDPSDVTKSGRIRIPKAPT
RLSFPAGEDAALARWAEFVEDDLADYDTGRNDPAADVTSRMSAYLKYGNIHPRTLAADLT
RPAPRGAKERSDDAGSAPRGAKERSDGASRGAQAYLRELAFRDFYADVLYHWPHSLWHNW
NRQFDGIALDTDEKAYERFEAWKAGRTGFPLVDAGMRQLAEIGWMHNRVRMVTASFLVKD
LHLPWWWGAKWFLEQLVDGDMASNNHGWQWAAGTGTDAAPYFRVFNPEAQAKKFDPEGEY
IRRWVGDTDADDYPDPIVDHKAEREEALRRFGQI
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgtggctcaggcgcgatctgcgcctgagtgacctaccagcgctagctgcagccagaggg
accgattcgtcggtccttctgtgctttgtggtggatccccggctggagaagtcgtcgggg
gagcgacgcctcgcgttcctcttcgattcgctccgcgaggtcgacgccaagctcgacggc
agactcctcgtcgtccgcggtcggccggaggaggagatcccgcggctggcccgggccgtc
ggcgccgggtccgtacacatctccggggacttctcgccgttcggtcgacgccgtgacgag
gcggtcgacgaggcgctgggcgacaccccgctcgaggccacgggttcgccgtacctcgtc
tcgcccggccgggtcaccaaggacgacggcgagccgtacaaggtcttcaccccgtacttt
cgccggtggcgcgatcacggctggcgaaagccggccgattcgtcggtcccggattcagcg
gttctcgacccgtcggacgtgacgaagtcgggccggatcagaatcccgaaggcgccgacg
aggctgtcgtttccggccggagaggatgccgcgctcgcccggtgggccgagttcgtcgag
gacgatctcgccgactatgacaccggacgcaacgaccccgccgccgacgtgaccagccgg
atgtcggcgtacctgaagtacggcaacatccacccgcgcaccctggccgccgatctgacg
cgtcctgctccccgaggtgcgaaggagcgcagcgacgacgccggttctgctccccgaggt
gcgaaggagcgtagcgacggagcctcgaggggcgcgcaggcctacctccgcgagctcgcc
ttccgcgacttctacgccgacgtcctctatcactggccacacagcttgtggcacaactgg
aatcgccagttcgacggcatcgctctggacaccgacgagaaggcttacgagcgcttcgag
gcgtggaaggccggacgcaccggtttcccgctcgtagacgccgggatgcgacagttggcc
gagatcggctggatgcacaaccgggtccggatggtcaccgcgtcgttcctcgtgaaggat
ctccacctgccgtggtggtggggtgcgaagtggttcctcgagcagctcgtcgacggcgac
atggcgtcgaacaatcacggctggcaatgggctgcgggtacgggaaccgatgcggccccg
tactttcgggtgttcaatcccgaggcgcaggccaagaagttcgaccctgagggtgagtac
atccggcgctgggtcggggacaccgacgccgacgactatcccgacccgatcgtcgaccac
aaggccgagcgggaagaagccctgcgcaggttcggccagatctga
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