KEGG   Gordonia amicalis: IHQ52_11845
Entry
IHQ52_11845       CDS       T08222                                 
Name
(GenBank) type I restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
gami  Gordonia amicalis
Brite
KEGG Orthology (KO) [BR:gami00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gami02048]
    IHQ52_11845
Enzymes [BR:gami01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     IHQ52_11845
Prokaryotic defense system [BR:gami02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   IHQ52_11845
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N ResIII T1R_D3-like DEAD AAA_22
Other DBs
NCBI-ProteinID: UKO93913
LinkDB
Position
complement(2557439..2560645)
AA seq 1068 aa
MSTVSEAEWENLALEWLADQEWQPLKGSDIAPGVENGRARPDDIVLPDRLITKMRELNPD
VPYEYLVQARAAILAPESQDPLAENHRLHEILVKGYRGITYVDHDGLEQTPTILLVGNRP
EDNELLAVQQVTVRNSEHQRRFDVVLYLNGLPVAFFELKQAGAAQADLPSAHAQLGTYLR
EFPLVFRFAVVSVISDVLSARYGTPFTPLEHYAPWNVDDDGKPLSMGHPTDPAQLGLELE
YLIDGVFNPERFLQILRNFTAFDAGADGYVKRIAKPHQYFAVTKAVGNTVAAAESNGKAG
VVWHTQGSGKSMEMELYAHLVARQPKLKNPTIVVVTDRRELDGQLFETFNRSELLDESPV
KVTTREQLRDELSNRTTGGIYFTTLQKFSRTQAERDAGADHPLLTDRRNVIVVVDEAHRS
HYDDLDGYARHLADAVPNATLIAFTGTPISFAERNTREVFGPYIDIYDLTRAVDDGATVP
VYFEPRLIQVTLADEVTEDDLDRAADEATKGLDDAERAQIEKSVAVINAVYGAPERVKAL
AKDIVEHWEGRSKSLETFISTPGKAFIVAATRDIAARLYEEIVALRPDWHDEAVDKGVIK
VVYSGSAKDQGLIAKHVRRDAQNKIIQKRLKDPDDELQIVIVKDMMLTGFDAPPLHTLYL
DRPLKGALLMQTLARVNRTFRGKPSGLLVAYAPLVDNLQQALAEYTETDQASQPVGRNID
EAVALTQQLISQLDDLCSGYDWRTKAKEADRGWIRAAIGLTEYLRSPATPGNSVPEGEET
LGGRFRTLAAHLAKAWALAGGKDTLEELRPTVQFYEEVRVWMGKFDAADRQAEGRPVPEE
IKRLLSSLVATSTATGQIVDIYDAAGLPKPSLADLGPDFEAKAKAATNPHLAIEALRATL
TEESARATRNNVVRQREFSERITELMNRYTNQQITSAEVIAELIAMAKEVAAEGSRGQKF
SPPLNDDELAFYDAVATNESAVEFQGDDILAQIARDLVRIMQRDTKFDWTVRDDVRAKLR
SSIKRLLVKYKYPPDKQPAAITTVFEQMEMMAPRYAENNATTDGEAQH
NT seq 3207 nt   +upstreamnt  +downstreamnt
atgagcacagtttcagaagccgagtgggagaacctggcacttgagtggctggccgaccag
gagtggcaaccactgaagggctccgacatcgcaccgggtgtcgagaacggccgggcccga
ccagatgacatcgtcctcccggaccggctgatcacgaagatgcgggagttgaatcccgat
gtcccctatgagtatctcgtgcaggcgcgggccgcgatcctcgcacccgagtcgcaagac
ccgctcgccgagaaccatcggctgcacgagatcctcgtcaaggggtaccggggcatcacc
tacgtcgatcacgacggcctcgaacagactccgaccattcttctggttggaaatcggccg
gaggacaatgaactgctcgccgtccagcaggtcacggtccgcaactcagaacaccaacgc
cgattcgatgtggtgctctacctcaacggtctgcccgtggccttcttcgagctgaagcag
gcaggcgccgcccaggccgatctcccctcagcccacgcacaactgggaacgtacctgcgc
gagttccccctggtgttccgcttcgcggtggtttccgtcatcagcgatgtcctcagcgcg
cggtacggcacaccgttcactccgctcgagcactacgccccgtggaacgtcgacgacgac
ggtaagcccctcagcatgggccatcccaccgaccccgcacagctgggactcgaactcgag
tacctcatcgacggggtgttcaatcccgaacgcttcctccagatactgcgaaacttcacc
gccttcgacgcgggtgccgacggttacgtcaaacgaatcgccaagccccatcagtatttc
gcggtcactaaagccgtcggcaacaccgtcgccgccgccgagagcaacggcaaggccggc
gtcgtctggcatacacagggttcgggtaagtcgatggagatggagctttacgcccatctc
gtcgcgcggcagccgaagctcaagaaccccacgatcgtggtggtgacggatcgccgtgaa
ctcgacggacaactcttcgagacattcaaccgttccgagcttctcgacgagtcaccggtg
aaagtcaccacccgtgagcaactgcgggatgaactgtcgaaccgcaccaccggcggcatc
tacttcaccacgctgcagaagttcagccgcacccaggcggaacgggatgccggcgccgac
catcccctcctcaccgatcgccgcaacgtcattgtcgtcgtcgacgaggctcaccgtagt
cactacgacgacctcgacggctacgctcgccaccttgccgacgcggttcccaacgccacc
ctcatcgcgttcaccggcacgcccatctcgtttgccgaacgcaacactcgcgaggtgttc
ggcccgtacatcgacatctacgacctgactcgcgccgtcgacgacggcgccacggtgccg
gtctatttcgagccgcgtctcatccaggtgaccctcgccgatgaggtgaccgaggacgat
ctcgacagggcagccgacgaggcgaccaaaggtctcgacgacgccgaacgcgcacagatc
gagaagtccgtggcggtcatcaacgccgtgtacggcgctccggaacgcgtcaaggccctc
gcgaaggacatcgtcgaacactgggagggccgttcgaaatcgttggagaccttcatctcc
acaccgggaaaggccttcatcgtcgcggccacccgcgacatcgcggcccggctctacgag
gagatcgttgcgctgcgtcccgactggcacgacgaggccgtcgacaagggcgttatcaag
gtcgtctactccggcagcgcgaaagaccaggggctcatcgccaaacacgtccggcgcgac
gcacagaacaagatcatccagaagcggctcaaggaccccgacgacgagctgcagatcgtc
atcgtcaaggacatgatgctcaccggcttcgacgcgccgcctctacacaccctgtacctg
gaccgaccgctcaagggcgcccttttgatgcagaccctggcgcgtgtcaacagaaccttc
cgcggcaaaccgtcgggcctcctcgtcgcctatgcaccgctcgtcgacaacctgcagcag
gcgttggccgagtacaccgagacagaccaggcaagccaaccggtcggccgcaacatcgac
gaagcggtggcgctgacgcagcagctgatctctcagctggacgatttgtgcagtgggtac
gactggcgcacgaaagcgaaagaggctgatcgaggttggattcgcgcggcgatcggtctc
accgagtacctccggtcgccggcgactccgggtaacagcgtgccggagggcgaggaaacg
ctgggcgggcgattccgaacgctcgccgcacatctcgccaaggcctgggcgctcgccggc
ggcaaggacaccctggaagaactgcgaccgaccgtgcagttctacgaagaggtccgggta
tggatgggcaagttcgacgccgcggaccggcaagccgagggccggcccgttcccgaggag
atcaagaggctcctgtcctccttggtcgcgacctcgaccgcaaccggccagatcgtggac
atctacgatgccgctggactccccaaaccgtccctcgccgatctcggaccagacttcgag
gccaaagccaaagctgcgacgaatccgcacctcgcgatcgaggctctgcgtgcgacgctg
acggaggaatcggcgcgtgccacgcgcaacaacgtcgtgcgacagcgggagttctccgag
cgcatcaccgagctcatgaaccggtacaccaaccaacagatcacctctgccgaggtgatc
gccgaactcattgccatggcgaaagaggtcgctgcggaaggcagccgtggacagaagttc
tcgccgccgttgaacgacgacgaactcgcattctacgacgccgtcgcgacgaacgagtca
gccgtcgagttccaaggcgacgacatcctcgcccagatcgcgcgtgaccttgtgcggatc
atgcagcgtgacaccaagttcgattggacggtgcgtgacgatgtccgagcgaagctacgg
tcgtcgatcaaacggcttctcgtgaagtacaagtatccgccggataagcaaccggccgcg
atcaccacagtgttcgagcaaatggagatgatggccccgcgctacgcggagaacaacgcc
accaccgacggggaggctcagcactga

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