Gordonia amicalis: IHQ52_12170
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Entry
IHQ52_12170 CDS
T08222
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
gami
Gordonia amicalis
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gami03400
]
IHQ52_12170
DNA repair and recombination proteins [BR:
gami03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IHQ52_12170
Archaeal homologous recombinant proteins
IHQ52_12170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
UKO89854
LinkDB
All DBs
Position
2631942..2633141
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AA seq
399 aa
AA seq
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MRIVHTSDWHLGRTFHGVDLLADQRRALSHLAALVAAESADVVIVAGDVYDRSVPSADAV
RIYDDGLAEIAAAGAQIVVTPGNHDSATRLGAGSSFAAAGGLHLRTSIDAIACPIVLSDE
YGEVAVYGIPYLEPDTARRHLGVEEVCGHTAVLDAAMSRIRADLATRQSRSVVVAHAFVS
GAAASGSERSISVGGVETVPAETFSGVDYVALGHLHSPQRVTDTVRYSGSLLPYSFGERT
HRKAVWVIDLDADGVTEIRRNELPVVRELSSLRGTLDELLAAEEYATAEGHYVEATLTDT
VRPLDAMRRLRERFPFAVHVQWDRPHTGSGVDYRSRVRGRSDAEIINSFVEDVRDSPTKG
ERVLIERALRAVVGEPEADAGADGELALFALDAFVAETA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcgtgcacacctccgactggcacctgggccggacgttccacggtgtcgacctg
ctggcggaccagcgtcgcgcgctgagccaccttgccgcgctggtggccgccgaatcggcc
gacgtcgtcatcgtcgccggtgacgtgtacgaccgctcggtgccttcggccgacgcggtg
cggatctacgacgacggactggccgagatcgccgccgccggtgcccagatcgtcgtgacg
ccgggtaaccacgactcggccacacgcctcggggcgggatcgtcgttcgccgccgccggt
ggtctgcacctgcggacctccatcgacgcgatcgcctgcccgatcgtgctgtccgacgag
tacggcgaggtcgcggtgtacggcatcccatacctcgaacccgacaccgcccgacgccac
ctcggcgtcgaggaggtgtgcggccacaccgcggtcctcgacgccgcaatgagccgtatc
cgggccgacctggctacccgacagtcgcgatcggtcgtcgtcgcccatgccttcgtcagc
ggtgcggcggcctccggatcggagcgttcgatcagtgtcggcggagtggaaaccgttccc
gccgagaccttctccggtgtcgactatgtcgccctcggtcacctgcactctccgcagcgc
gtcaccgacacggtgcgctacagcggctcgctgctgccgtactcgttcggggagcgcacg
caccggaaagccgtgtgggtcatcgacctcgacgccgacggcgtcaccgagatccgccgt
aacgaactacccgtcgtgcgcgaattgagttcactgcgtggaactctcgacgagttgctg
gccgccgaggagtacgccacggccgagggccactacgtcgaggcgacgctgaccgatacg
gtgcgtccgctcgacgcgatgcgccgcctgcgggagcgattcccgttcgcggtgcacgtg
cagtgggatcgtccgcacaccggctccggggtcgactatcgctcgcgggtccgcggccgg
agcgatgccgagatcatcaactccttcgtggaggacgtccgcgacagcccgaccaagggg
gagcgggtactcatcgaacgcgcgctgcgcgctgtcgtcggcgaacccgaggcggacgcc
ggcgccgacggcgagttggcgctgttcgccctcgacgcattcgtcgccgagaccgcatga
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