Gordonia amicalis: IHQ52_12205
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Entry
IHQ52_12205 CDS
T08222
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gami
Gordonia amicalis
Pathway
gami00300
Lysine biosynthesis
gami00470
D-Amino acid metabolism
gami01100
Metabolic pathways
gami01110
Biosynthesis of secondary metabolites
gami01120
Microbial metabolism in diverse environments
gami01230
Biosynthesis of amino acids
Module
gami_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IHQ52_12205 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IHQ52_12205 (lysA)
Enzymes [BR:
gami01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
IHQ52_12205 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UKO89860
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All DBs
Position
2640263..2641684
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AA seq
473 aa
AA seq
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MSAHPAGPRHAELLAAPHLAQRPNDPAVLAAIPPQVWPRNAARDDSGELRIAGVPVSELA
AEFGTPAFIVDEADFRSRCRDMMAAFGPYGRVHYASKAFLSSEVARWVADEGLSLDVCTG
GELAIALRAGFPAERIALHGNNKSPEELAAAVDAGVGHVVLDSMIEIDRLDAISGERGAV
TDVLVRVTVGVEAHTHEFISTAHEDQKFGFSLAGGVAMEAIRRVFTADNLRLVGLHSHIG
SQIFDMDGFELAAHRVLGLLHDVVDEFGVEKTSQISIVDLGGGLGISYLEEERPLPVQKV
AETLADIVRRESAAVGLPMPVIAVEPGRAIAGPGTITLYRVGTVKDVEIGGGAVRRYISV
DGGMSDNIRTVLYDAEYDVRLVSRVSDARAVVCRVVGKHCESGDIVIKDCWLPEDLGPGD
LIAVAATGAYCYSMSSRYNMTMRPPVVAVSDGKARLMLRRETIEDFLSLEVGS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgcacccggccggaccccggcacgccgaactgctggccgcgccgcatctcgcg
cagcggccgaacgatccggccgtcctcgccgccatcccgccccaggtgtggcctcgcaac
gccgcccgcgacgactcgggtgagctgcgcatcgccggcgtgccggtgagcgagctggcc
gccgagttcgggacgccggcgttcatcgtcgacgaggcggacttccggtcccggtgccgc
gacatgatggcggcgttcggcccctacggccgggtgcactacgcgtcgaaggccttcctg
agcagcgaggtggcccgctgggtcgccgacgagggactgtcgctggacgtgtgcaccggc
ggcgagctcgccatcgccctgcgcgctggtttcccggccgaacgaatcgcgttgcacggc
aacaacaagagccctgaggagctggccgctgcggtcgacgccggtgtcggccacgtggtg
ctcgactcgatgatcgagatcgaccggctcgacgccatctccggtgagcggggcgccgtc
accgacgtgctcgtccgcgtcaccgtcggtgtcgaggcgcacacccacgagttcatctcg
accgcccacgaggaccagaagttcggcttctccctcgccggcggcgtcgccatggaggcg
atccgacgggtcttcaccgccgacaacctgcgcctcgtcggtctgcacagccacatcggc
tcgcagatcttcgacatggacggcttcgagctggccgcccatcgcgtcctcgggctgctg
cacgatgtcgtcgacgagttcggcgtcgagaagacctcgcagatctcgatcgtggatctc
ggtgggggattaggtatctcgtacctcgaggaagagcgtccgctgccggtgcagaaggtt
gcggagacccttgccgacatcgtccgccgcgagtccgccgccgtgggcctgccgatgccg
gtcatcgccgtcgaacccggccgggcgatcgccgggccgggcaccatcacgctgtatcgg
gtgggcacggtcaaggatgtggagatcggcggcggcgcggtgcgccgctacatctccgtc
gacggcggcatgagcgacaacatccgtacggtgctctacgacgccgaatacgacgtccgc
ctggtctcgcgggtctccgacgcacgcgcggtggtctgtcgcgtcgtcggaaagcactgt
gagagtggcgatatcgtgatcaaggattgctggctgccggaggacctgggccccggtgac
ctcatcgcggtcgccgccaccggtgcctactgttactcgatgtcgagccgctacaacatg
accatgcggccgccggtcgtggccgtgtccgatgggaaggcccgcctgatgctgcggcgc
gagaccatcgaagacttcctcagcctggaggtgggctcgtga
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