Gordonia amicalis: IHQ52_12550
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Entry
IHQ52_12550 CDS
T08222
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gami
Gordonia amicalis
Pathway
gami00061
Fatty acid biosynthesis
gami00071
Fatty acid degradation
gami01100
Metabolic pathways
gami01212
Fatty acid metabolism
gami02024
Quorum sensing
gami04146
Peroxisome
Module
gami_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
IHQ52_12550
00071 Fatty acid degradation
IHQ52_12550
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
IHQ52_12550
09145 Cellular community - prokaryotes
02024 Quorum sensing
IHQ52_12550
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gami01004
]
IHQ52_12550
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gami04147
]
IHQ52_12550
Enzymes [BR:
gami01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
IHQ52_12550
Lipid biosynthesis proteins [BR:
gami01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
IHQ52_12550
Exosome [BR:
gami04147
]
Exosomal proteins
Exosomal proteins of breast milk
IHQ52_12550
Exosomal proteins of breast cancer cells
IHQ52_12550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
UKO89920
LinkDB
All DBs
Position
complement(2713593..2715380)
Genome browser
AA seq
595 aa
AA seq
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MQQQYATPSDLTIDEKANLVDSILRYRTERPTMPLFRKRSHNQWINVTAKHFADEVDAVA
KGLVASGIEPGDRVAILSSTRYEWTVLDYAIWRAGACTVAIYETSAPDQVQWILEDSGAK
LLFVEDQGHYTKHIRVIDETPTLKETLVIDEHALPTITKRGAKTADDELDRRYANSLSSD
AATLIYTSGTTGRPKGVLLTHANFMAECAATRDAVGAGLAEGKTTLLFLPLAHVLARVIA
VASVENGVILGHTNDITNLVNDFAAFKPHYVLSVPRVFEKVYNSAKQKAYDGGKGSIFEK
ATDTAIEYSTAMEAGKIGLGLKLRHALFDKLVYGKLRAALGGQCEGAISGGAPLGARLGH
FFRGAGIPVYEGYGLSETTAAVTANNEENQKVGSVGRPVPGVTIAIADDGEILLKGPVVF
GGYWRNEAATADAIRDGWFHTGDIGTLDDGYLFITGRKKELIVTAGGKNVSPAQLEDSIR
AHPMVSQCLVVGDNKPFIAALITIDPEAVPGWLERHHLPADTPLSTLIENADLKAEIDAA
VKDANSKVSNAEAIKKFTILDTDFSIETGELTPTLKLKRNVVHDAHKQAIADLYT
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcagtacgccaccccgtccgatctcacgatcgacgagaaggcgaacctcgtc
gactcgatccttcgttatcggaccgagcggcccacgatgcccctcttccgcaagcgctcc
cacaatcagtggatcaacgtcaccgcgaagcatttcgccgacgaggtcgacgcggtcgcc
aagggactcgtcgcgtcgggcatcgagcccggcgaccgcgtggcgatcctgtcgtcgacg
cggtacgagtggaccgttctcgactacgccatctggcgcgcgggcgcatgcaccgtcgcc
atctacgagacctcggcccccgatcaggtgcagtggatcctcgaggattccggagccaag
ctcctcttcgtcgaggaccaaggccattacaccaagcacatccgggtgatcgacgagacg
ccgacactcaaggaaaccctggtcatcgacgagcacgcgctgccgacgatcaccaagcgc
ggcgcgaagacggccgacgacgaactcgaccgccgctacgcgaattcgctgtcgtccgat
gccgcgaccctcatctacacctcgggcaccaccggtcgcccgaagggtgtcctgctcacc
catgccaacttcatggccgagtgcgccgccacccgcgacgccgtcggcgccggtctggcg
gagggcaagaccactctgctgttcctgcccctcgcccacgtcttagcccgcgtcatcgcg
gtggcgagcgtggagaacggcgtgatcctgggccacaccaacgacatcacgaatctcgtc
aacgacttcgcggccttcaagccgcactacgtgctgtcggtcccgcgcgtcttcgagaag
gtctacaactcggcgaagcagaaggcctacgacggcggcaagggttccatcttcgagaag
gccaccgacaccgccatcgagtacagcacggcgatggaggccggcaagatcggcctcggc
ctgaagctccgccacgcgttgttcgacaaactcgtctacggcaagctccgtgcagcactc
ggcggtcagtgcgagggtgcgatctccggcggtgcaccgctcggcgcccgcctcggtcac
ttcttccgcggtgccggcatccctgtctacgagggctacggattgtcggagaccaccgcc
gccgtcaccgcgaacaacgaggagaaccagaaggtcggttcggtcggccgcccggtcccc
ggtgtgacgatcgcgatcgccgacgacggcgagatcctgctcaagggaccggtcgtcttc
ggcggctactggcgcaacgaggccgcgaccgccgacgcgatccgcgacggctggttccac
accggtgacatcggcaccctcgatgacggctacctcttcatcaccggccgcaagaaggaa
ctgatcgtcaccgcgggcggcaagaacgtctccccggcccagctcgaggactcgatccgc
gcccacccgatggtcagccagtgcctggtggtcggcgacaacaagccgttcatcgccgca
ctgatcaccatcgacccggaggccgtgccgggctggctcgagcgccaccacctgcccgcc
gacaccccgctgtcgacgctgatcgagaacgcggacctgaaggccgagatcgacgccgcg
gtgaaggacgccaacagcaaggtctccaacgccgaggcgatcaagaagttcaccatcctc
gacaccgacttctcgatcgagaccggtgagctgacgccgacgctgaagctcaagcgcaac
gtcgtccacgacgcgcacaagcaggcgatcgccgacctctacacgtag
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