Gordonia amicalis: IHQ52_12565
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Entry
IHQ52_12565 CDS
T08222
Name
(GenBank) AAA domain-containing protein
Organism
gami
Gordonia amicalis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTES_1575
AAA_12
AAA_30
AAA_11
AAA_19
ResIII
SLFN-g3_helicase
UvrD-helicase
NAT10_TcmA_helicase
DUF559
nSTAND_NTPase5
AAA_16
AAA_22
AAA_31
nSTAND3
OVT1
MeaB
Fer4_NifH
PhoH
Motif
Other DBs
NCBI-ProteinID:
UKO89923
LinkDB
All DBs
Position
2717996..2722150
Genome browser
AA seq
1384 aa
AA seq
DB search
MQDDTRETLRDQVARLMAFLRDVVRSRSGDVRDIDDHAGHVWVGASTPVPVRPAAAPGQV
VVEIGSADAVHADVARLVDELSASPDTLELVLANALVTVHDDAGAEPLVREHLLTQAVVA
DRDGSGAIRLSLGAGSAPTMHDTHLLAAVDGLELAGAVKTRTRLAEQPSVVVKKVTDLVG
EWLGEIEIDADRATLALDMRPAIVLRRRGVENSLAFYDAIIDDLRDEGSSVPVGLAQLVR
PIDAEDRLAALDDPDVLSPRRLIADALFPLPSNVEQRDVLVRLGNDSGVVVEGPPGTGKT
HTIANVTSALLAKGQRVLVVSEKAHALHVLRDMLPPALRELTVSIADISQDRAETIVSVV
ENLAARKSAFSMSVADAEIADLEARRDHALHQRDQIMRALWDLRAGETEVHEWVAGDYRG
TPAEIVRQVKRDAERYDWMPPGLDGAVPPLDSGEFSRLVELLKVTGGDTGRLTQRFPDLA
GRLPEPAEMDTICARIAARPHEPHHGAESLLPSLDGVDSERLLSIKQLCEELGVAAGEVS
SFPAPMVDMADRLLAGRAAHLWSRVTTLSPVIAEAARRDRELGAHTVLVDGDRPGDAALF
DAAADHLADGGQWRGRLRRSPQQRAVEESPVRATVDGRVPTDEASLRRVADHLTVVDAVH
QVHRILADLHVPVDASGSRSAQVDQLVRLDFQLAWISRLVTGRDRLVHELEAISPGGPRP
RSVGEIAEVAEQAGSIAAANDAALAERELADCAYGLAAELEKGPSPEGDALLAALGTADA
DAIRSARRAFLRAREQANAETALDLLELRLKSRAPELARTMWATPSDPVWSDRAREMAAA
WAWRYAHTWVSERSDPHSEARIQADLDAIEVDIAQLTTRLASARAWRELLVRTTTGEIQA
LQSYRDHMINLGKGSGKHANRFRRAAREAMSVAQNAIPAWIMSISQVAETLPPRRHSFDV
VIVDEASQADITSSFLLWLAPRIIVVGDDKQCAPVGLAGTTLDDAFAELDAALPDLPTYL
RDGLTPRSSLFSLLRSRFGNVVGLREHFRSMPEIIEFSSQQFYGNAPLIPVRQYGSDRLE
PLRTVAVDGQATGSGSGLVNDAEVEAIVEALRRCLGDPAYDGRDFGVIALQGTKQAEALE
RALREGLDAQAWRARRIRVGTPPDFQGDERHVVFLSMVVSDPSAISALTRAESQRRINVA
ATRAMDQVWLFHSIGLDDLRHNDLRYSLLSYFTAHEGLAISPMPTDVPDDRRVEPFDNLL
EQRVFNRLAALGYHVTPKVTVNNRIIDLVVLGADARMAVECDPDAFPGTGRQARSDLERE
RELRRCGWEFARVRESEFELDPDRVIDAVAVALEARGCKPGSLTQRPAAEDAPTWTPIDL
TVGD
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatgacactcgcgagacgctgcgagaccaggtcgcccggctgatggcgttcctg
cgggacgtcgtccgctcgcgctccggggatgtccgggacatcgacgaccacgccggccac
gtctgggtcggcgcctcgacgccggtcccggtacggcccgcggccgcgccggggcaggtc
gtcgtcgagatcggttccgccgacgcggtccacgccgatgtcgcacgcctcgttgacgaa
ctgtccgcgagtcccgacacgctcgaactcgtcctggccaacgctctggtcacggttcac
gacgatgccggcgccgaacccctggtccgcgagcatctgctcacccaggccgtggtcgcc
gaccgcgacgggtccggcgccatccggctgtcactcggcgcgggatccgcgccgacgatg
cacgacacccatctcctcgccgcggtcgacggactggaactcgcgggagcggtgaagacc
cggaccagactcgccgagcagccgtccgtggtcgtgaagaaggtcaccgacctcgtgggt
gagtggctgggcgagatcgagatcgacgcggaccgcgccaccctcgcgctcgacatgcgg
ccggcgatcgtcctgcggcgccgcggcgtcgagaactcgctcgccttctacgacgcgatc
atcgacgacctgcgcgacgagggctcgagcgtgcccgtcggtctggcccagctcgtcagg
ccgatcgacgccgaggaccggctcgccgccctggacgaccccgatgtgctctcgccccga
cgtctcatcgccgacgcgctcttcccgctaccgtcgaacgtcgagcagcgggacgtgctg
gtccggctgggcaacgacagcggggtggtggtcgagggaccgcccgggacgggcaagacg
cacaccatcgccaacgtgacgtcggcgctgctggcgaagggtcagcgcgtgctggtcgtc
agtgagaaggcgcacgcgctccacgtgctgcgggacatgctcccgcccgcgctgcgggaa
ctcacggtgtcgatcgccgacatctcccaggaccgtgccgagaccatcgtgtcggtggtc
gagaacctcgcggcacgcaagtcggcgttctcgatgtccgtcgccgacgccgagatcgcc
gacctcgaggcccgccgcgaccacgccctgcaccagcgcgaccagatcatgcgtgcgctc
tgggatctccgggcgggagagaccgaggtccacgagtgggtggcgggggactaccgcggc
accccggccgagatcgtgcgccaggtcaagcgcgacgccgagcgctatgactggatgcca
ccgggactcgacggtgcggtcccgccgctcgactccggcgagttctcccggctcgtcgaa
ctgctgaaggtgaccggcggcgacaccggccggctgacccagcggttccccgacctcgcc
ggccgtctgccggagcccgccgagatggacaccatctgcgcgcggatcgccgcccgcccc
cacgagccccatcacggcgcagaatcgttgctgccgtctctcgacggcgtcgacagcgaa
cgactgctctccatcaagcagctctgcgaggagctgggcgtggccgccggtgaggtgtcg
tcgttccccgccccgatggtcgacatggccgaccgtctgctggccggccgcgcagcccac
ctgtggtcgcgggtgacgacgctgtccccggtgatcgccgaggccgctcggcgcgaccgc
gagctgggcgcccacacggtcctcgtcgacggagaccgaccgggcgatgcggcgttgttc
gacgcggcggccgaccatctggcggacggcggccagtggcggggccggctacgtcgatct
ccgcagcagcgagcggtcgaggaatcgccggtgcgggcgacggtcgacggtcgtgtcccg
accgacgaggcatcgttgcggcgcgtcgccgaccacctgacggtcgtcgacgccgtccac
caggttcatcgcatcctggccgatctccatgtacccgtcgacgcctccgggtcccggtcc
gcgcaggtcgatcagctcgtccgactcgacttccagctggcgtggatctcgcggctggtc
accggccgcgaccgcctcgtccacgaactcgaggccatcagccccggcggcccgcgaccc
cgcagcgtcggcgagatcgccgaggtggccgagcaggccgggtcgatcgcggccgccaac
gacgccgccctggccgaacgtgagctcgccgactgcgcctacgggctcgccgccgagctg
gagaaaggtccctcgcccgagggggacgcgctgctcgccgcgctcggtaccgccgatgcc
gacgcgatccgttcggcgcgcagggcattcctccgggcccgggagcaggcgaacgcggag
accgccctcgatctgctcgaactgcgtctgaagagtcgcgccccggaactggcccggacg
atgtgggcgacgccctccgatccggtctggtcggatcgtgcgcgggagatggccgccgcc
tgggcgtggaggtacgcccacacctgggtgtccgagcgcagcgatccgcattccgaagcc
cggatacaggccgacctggatgccatcgaggtcgacatcgcccagttgaccacccggctc
gcctcggcacgtgcctggcgggagttgctggtgcgcaccacgaccggcgagatccaggcg
ctgcagtcctaccgcgaccacatgatcaacctcggcaagggatcgggtaagcacgcgaac
cgtttccgacgtgcggcgcgcgaggcgatgtcggtggcgcagaacgcgatcccggcctgg
atcatgtcgatcagccaggtggcggagacgcttccgccgcggcggcactccttcgacgtc
gtcatcgtcgacgaggcgtcgcaggccgacatcacgagttccttcctgctgtggctggcg
cctcggatcatcgtcgtcggcgacgacaagcagtgtgcgccggtgggactcgcgggcacc
acgctcgacgacgccttcgccgaactcgacgcggcgctcccggatctgccgacctacctc
cgcgacggactcaccccgcggtcgagtctgttctcgttgctccgcagccggttcggcaac
gtggtcgggctgcgcgagcatttccggtcgatgccggagatcatcgagttctcgtcgcag
cagttctacggcaacgcgccgttgatcccggtgcggcagtacggttcggaccggctcgag
ccgttgaggacggtcgccgtcgacggtcaggccaccggaagcggctccggactggtcaac
gacgccgaggtggaggcgatcgtcgaggccctccggcggtgtctgggcgatcctgcctac
gatggccgggatttcggcgtgatcgcactacagggcaccaagcaggccgaggccctcgag
cgggccctgcgtgagggactcgacgcgcaggcgtggcgcgcccggcgcatccgggtgggc
accccgccggacttccagggcgacgagcgccacgtcgtcttcctgtcgatggtggtctcc
gacccatcggcgatctcggcattgacccgcgccgagtcgcagcgacggatcaacgtcgcg
gccacccgggccatggaccaggtctggctgttccactcgatcggtctggacgacctgcgg
cacaacgatctccggtactcattgctgtcgtatttcaccgcccatgagggtctcgcgatc
agcccgatgccgaccgacgtccccgacgaccgtcgtgtcgaacccttcgacaacctgctc
gaacagcgggtgttcaaccgtctcgcggcactcggctatcacgtcaccccgaaggtgacc
gtcaacaaccgcatcatcgacctggtggtactcggcgccgacgcgcggatggccgtcgaa
tgcgatcccgacgcgttcccgggaaccgggcgtcaggcccgttcggatctggagcgcgag
cgtgaattgcggcgctgcggatgggaattcgcgcgggtccgcgagtcggagttcgaactc
gatccggaccgggtgatcgacgcggtggccgtggccctcgaagcgcgcggctgcaagccc
ggttcgctcacccagcggccggccgcggaggacgcgccgacgtggaccccgatcgacctg
accgtgggtgattga
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