Gordonia amicalis: IHQ52_12580
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Entry
IHQ52_12580 CDS
T08222
Name
(GenBank) DUF1729 domain-containing protein
KO
K11533
fatty acid synthase, bacteria type [EC:2.3.1.-]
Organism
gami
Gordonia amicalis
Pathway
gami00061
Fatty acid biosynthesis
gami00074
Mycolic acid biosynthesis
gami01100
Metabolic pathways
gami01212
Fatty acid metabolism
Module
gami_M00082
Fatty acid biosynthesis, initiation
gami_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
IHQ52_12580
00074 Mycolic acid biosynthesis
IHQ52_12580
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gami01004
]
IHQ52_12580
Lipid biosynthesis proteins [BR:
gami01004
]
Fatty acid synthase
Bacteria type
IHQ52_12580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fas1-AflB-like_hel
Acyl_transf_1
FAS_AT_central
MaoC_dehydratas
ketoacyl-synt
DNA_pol_B_N
Ketoacyl-synt_C
SAT
adh_short
Fas_alpha_ACP
FAS_I_H
Adenine_deam_C
Motif
Other DBs
NCBI-ProteinID:
UKO94069
LinkDB
All DBs
Position
2723911..2733165
Genome browser
AA seq
3084 aa
AA seq
DB search
MTVDQFRTGSQGAANAERPTTTLIDRLAQGEPYAISFGGQGGAWLPTLAELVVDADLEHR
IAAIVEAAEQLVAPVADDLVVARAEGFHPLAWVHAHDAGDGVPTEAALADFTLSGPGVLL
TQLAAIEALRKQGLDTAALPPNAVIGHSQGSLATDAVGAEGSAAEAGQGLLLAVAHLIGA
AGSLIARRRGLGVTTDGTPMLAVNNVTPARVDEILDQYRAGLAESDLATAPVVSIKNSRN
ALVLSGAPRHLAGFVALCERIAAAEADERKRKLTGGAPFAPKFDHLQVSVAFHHPNMAEA
VELVGEWADRCGIDRDLATRHAHDILVAHVDWVSSVDEVVAGGAKWILDFGPADIATRLT
SSLVRGQGVGLVPAALRVGQRNLFSPGGVPEVAAPWSQFTPTLVELPDGRTVVDTAFTRL
TGRSPMLLAGMTPTTVDPAIVAAAANAGHWAELAGGGQVTEDIFARNIATLTDLLEPGRE
AQFNALFLDPYLWKLQLGGKRLVQKARAQGAPLDGVIVSAGIPELEDAVALVDEFVEAGL
RFVAFKPGTVEQIRSVVRIAAEVPHHPIIVQIEGGRAGGHHSWEDLDDLLLATYGELRAR
PNVVICVGGGIGTPERASEYLTGVWSTGYGYPLMPLDGILVGTAAMATKEATTTPEVKQL
LVETAGIDEWIGAGHATAGMASGRSQLGADIHEVDNTASRCGRLLDEVAGDAEAVAARRD
EIIAAMADTAKPYFGDVATMTYREWLDRYATLAVGDAHGDQHPWADITWQQRFVEMLQRT
EARMHPQDSGPIPTMFADLSATDDPHAAIDALGSVYREIDTDILHPADVAFFLELCRTPG
KPVNFVPVIDKDVRRWWRSDSLWQAHDARYGADAVCVIPGPVAVAGITRVDEPVGELLDR
FEARVVTDLLTAGVRSAQVASRHRAGLVPDAGVLTAVLESDDVSWAGRIVPSPVALLGDR
DAWSVVAPERAEHEPTGAVIEQVGSDNGVTRFDLVVPISGAAVRIPLLAGLGVRDGGSPV
VGLDEAAGAMTEILTVAAGGDLAEVTDGTATTSITWQPDSVADHASVTGFSLPANLRPTT
PTEPFGFAVPDTLVGACWPSVFSVIGAARTEDGAPVVEGLLDLVHLDHAIALTGEIPTET
AALTITARTGAVRDSEVGRVVEVSVEIAGPAGPIATLEERFAIRGRLGAAELTDPLRAGG
APTAEQSATRKLLRSATITAPNRMHGFAVVSGDRNPIHTDASAAKLAGLGEPIVHGMWLS
AAAQQVVTATDSKNPTPSPRPLIGWTARYLGMVRLGDTITVRVDRVGLDNGREVVEVSAK
VGDNLVMSATGLLAAPRTVYAFPGQGIQSKGMGLDARSRSKAARKIWDRADKHTRQALGF
SILAVVRDNPTTLVANGTTYNHPDGVLYLTQFTQVAMATLGVAQIAELKEAGGFVEGAIT
CGHSVGEYNALAACAGVLPLEAVLEVVFQRGEAMHHLVPRDEQGRSDYRMAAIRPSQFGL
ADADVTGFVAGLGEEIGEFLEVVNLNLLGSQYAIAGTVRGLEHLEAEIDRRRAEFGGKRA
FIVIPGIDVPFHSSVLRAGVPEFRGKLEELLPTDIDIDILIGRYIPNLVPRLFNLGRDFV
EEIAALVPSDPLNAVLADWDSWTAKPAELARVLLIELLAWQFASPVRWIETQDLLFSGPE
RNGLGVQRFVEIGLKGAPTLTGLANNTLKLDDYASATTEVVNVERDSDVILAKDAGHEPD
EDEIDAPAASADAPAEAAPAAAAPAPAAAPAAPAGGPRPDDIAFTPSDAVKSVIALWTKM
RVDQIGAADTIEALCDGVSSRRNQLLLDIGGELGLGAIDGAAEADMVALASTVETLARGY
RPLGPVLTDAVSDQIRKVLGPVGKRQNYITDRVANVWQLGPGWGLHATVALALGTRDGAS
VRGEALGNLLDGPVANADALDALIDKAVTAVGAEKGIAVSKPAGESGGGATVDAAALGEF
TEQITGRSGALASAAYTVLEKLGLAEVADLAEAAADPNAELAELVSAELGSDWARTVAPA
FDDAKIVLIDDRWATAREDLVRLWLTDEHELDADFEKVVDGFVGAGDTVAEHATWWQGKA
LASGNAVHGRVFGAIAHAAENPEKGIYSREIAVVTGASKGSIAAGVVAGLLAGGATVIAT
TSRLNSERLAFYKKLYRENARTGAALWIAPANMASYNDVDDLVEWVATEQTENLGGTTAV
VKPAMKPTMLFPFAAPRVAGDLTDAGARAELEMKVLLWSVERLIAGLAEVHSDHDIAARL
HVVLPGSPNRGMFGGDGAYGESKAALDALVTRWSAEESWGSKTTLAHALIGWVRGTGLMG
HNDGMVDAVEAAGVRTWSTGEMAANLLTLCTPEQRASAVGAPVLADFTGGLDASTDLKAL
AATAAAAAEGAEDSDEAPASTTVAALPAPARAPRGMRPDWPSIDARPEDLVVIVGAGELG
PYGSARTRFEMEVDEKLSAAGVLELAWNTGLIHWDSAPKPGWYDTESGDPVPESEIAERY
HDEVVSRCGIRRYADDGAMVDNTSPLLTSVFLDGDLTFTVNSEAEARAFASADPEKTRVT
QNPDGDWQVTRLAGTEIRVPRKFSLTRTVGGQIPTGFDPTRWGVSPDMVEAIDRVALWNL
VATVDAFLSSGFTPSELMRWVHPGLVANTQGTGMGGMASMRDLYVNTLLGEANANDILQE
ALPNIVAAHVVQSYVGSYGAMIHPVAACATAAVSVEEGVDKIRLGKALFAVAGGFDDLGI
EGIVGFGAMSATADSAKMTARGIDDRRFSRANDRRRGGFVESAGGGTILLARGDVAAQMG
LPVLGVVAWAQSFGDGVHTSIPAPGLGALGAARGALSSPLANALSVLGVGADDVALVSKH
DTSTKANDPNESELHERLAEAIGRGTGAPLFVVSQKSLTGHAKGGAAAFQLIGLCQMLRD
GVIPPNRSLDCVDEKMKEYPHLVWPRETLQLGERFPLKAGLLTSLGFGHVSGLIAVVHPE
AFIASLAPEERETYRQRADERARLGSQRFLQSICGGEPAYQRPPNRRFDESVDEHDAEAG
MLLDPSVRLDEADVYGSGRVPENR
NT seq
9255 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtcgaccagttccgtaccggctcgcagggcgccgccaacgccgagcgccccacc
accaccctcatcgaccggctcgcccagggtgagccctacgcgatcagtttcggcggtcag
ggcggcgcgtggctgccgacgctggccgagctggtggtcgacgccgacctcgaacaccgg
atcgccgccatcgtggaggccgcggaacagctcgtcgcgccggtcgccgacgacctcgtc
gtcgcccgcgccgagggcttccacccgctcgcgtgggttcacgcacacgacgcaggcgac
ggggtgccgaccgaggccgcactcgccgacttcacgctctcgggtccgggagtgctgctg
acccagctcgccgccatcgaggcgctgcgcaagcaggggctcgacaccgccgctctcccg
cccaacgccgtcatcggacactcacagggctccctggccaccgacgcggtcggagccgag
ggaagcgccgcggaggccggccagggcctgctgctcgccgtcgcccacctcatcggcgcc
gccggttcgctgatcgcgcgccggcgcggactcggtgtcaccaccgacggcacgccgatg
ctcgcggtcaacaacgtcaccccggcgcgcgtcgacgagatcctcgaccagtaccgcgcc
ggtctggccgagagcgacctggccacggcgcccgtggtgtcgatcaagaacagccgcaac
gcactcgtgctctccggtgccccccgtcacctcgccggcttcgtcgccctctgcgagcgt
atcgccgccgccgaggcagacgagcgcaagcgcaagctgaccggcggcgcgccgttcgcc
ccgaagttcgaccacctgcaggtgtcggtcgccttccatcaccccaacatggccgaggcc
gtcgaactcgtcggtgagtgggccgaccgctgcggcatcgaccgcgacctcgccacccgc
cacgcccacgacatcctcgtcgcgcacgtcgactgggtctcttccgtcgacgaggtcgtc
gccggcggcgccaagtggatcctcgacttcggtcccgccgacatcgcgacccgtctcacc
tcctcgctcgtccgcggtcagggcgtcggcctcgtccccgcagcgctgcgtgtcgggcag
cgcaacctcttcagcccgggcggcgttcccgaggtcgccgcaccgtggtcgcagttcacc
ccgaccctcgtcgagctgcccgacggtcgcaccgtcgtcgacaccgcgttcacgcgtctc
accgggcgttcgccgatgctgctcgcgggcatgaccccgaccaccgtcgacccggcgatc
gtcgccgccgccgccaacgccggccactgggccgagctcgccggcggtgggcaggtcacc
gaggacatcttcgcccgcaacatcgccaccctcaccgatctgctcgagccgggacgggaa
gcacagttcaacgcgctgttcctcgacccctacctgtggaagctgcagctcggcggcaag
cgcctggtgcagaaggcccgcgcccagggcgcgccgctcgacggcgtcatcgtctcggcc
ggcatccccgagctcgaggatgcggtcgccctggtcgatgagttcgtcgaggccggactc
cgcttcgtcgccttcaagccgggcaccgtggagcagatccgctcggtcgtccggatcgcc
gcggaggtcccgcaccacccgatcatcgtccagatcgagggcggccgcgccggtggccac
cactcgtgggaggacctcgacgacctgctgctggccacctacggcgaactccgcgcccgg
cccaacgtcgtcatctgcgtcggcggcggcatcggcaccccggagcgggccagcgaatac
ctgaccggcgtctggtcgaccggttacggctacccgctgatgccgctcgacggcatcctc
gtcggcaccgcggcgatggccaccaaggaggccaccaccacgcccgaggtcaagcagctg
ctggtcgagaccgccggtatcgacgagtggatcggtgcgggccacgccaccgccggaatg
gcctccggccgttcgcagctcggcgccgacatccacgaggtcgacaacaccgcctcgcgt
tgcggccgtctgctcgacgaggtcgccggtgacgccgaggccgtcgccgcccgccgcgac
gagatcatcgcggcgatggcggacaccgccaagccgtacttcggcgacgtcgccacgatg
acctaccgcgaatggctcgaccgctacgccaccctcgcggtcggcgatgcacacggcgat
cagcatccctgggccgacatcacctggcagcagcgtttcgtcgagatgctgcagcgcacc
gaggcccgcatgcacccgcaggactcgggcccgatcccgacgatgttcgccgacctgtcc
gccaccgacgatccgcacgccgcgatcgacgcgctgggcagcgtctaccgcgagatcgac
accgacatcctgcatcccgccgacgtcgcgttcttcctggagctctgccgcaccccgggc
aagccggtcaacttcgtgccggtcatcgacaaggacgtgcgccgctggtggcgcagcgac
tcgctgtggcaggcccacgacgcgcgctacggcgccgacgccgtctgcgtcatcccgggc
ccggtcgccgtcgccggcatcacccgcgtcgacgagccggtcggcgaactgctggaccgt
ttcgaggcccgggtcgtcaccgatctgctgaccgcaggggtgcgttcggcgcaggtcgcc
tcgcgacatcgcgcgggactggtccccgacgccggtgtcctgaccgcggtcctggagtcc
gatgacgtgagctgggcggggcggatcgtcccgagtccggtcgcgctcctcggtgaccgc
gacgcctggtcggtggtcgcccccgaacgtgccgagcacgagcccaccggcgcggtgatc
gagcaggtcggttcggacaacggcgtgacccgcttcgatctcgtggtcccgatctccggt
gcggccgtgcgtatcccgctgctcgccggcctcggtgtgcgggacggcggctcgcccgtc
gtcggactcgacgaggcggccggcgcgatgaccgagatcctcaccgtcgccgcgggcggc
gacctcgccgaggtgaccgacggcaccgcgaccacctccatcacctggcagccggactcg
gtggccgaccacgcgtcggtgaccggcttctccctgcccgcgaacctgcgcccgaccaca
ccgacggaacccttcggcttcgccgtccccgacaccttggtcggcgcctgctggccgagc
gtgttcagcgtcatcggtgcggcccgcacggaggacggcgcaccggtcgtcgagggactg
ctcgacctggtccatctcgaccatgcgatcgccctcaccggtgagatccccacggagacc
gccgcactgacgatcaccgcgcgtaccggggcggtgcgcgactccgaggtgggccgtgtc
gtcgaggtctcggtcgagatcgccggaccggccggaccgatcgccaccctcgaggagcgg
ttcgcgatccgcggacgcctcggtgcggccgaactcaccgaccccctccgggcgggcggt
gcaccgacggccgagcagtcggccacccgcaaactgctccgctcggccaccatcaccgcg
ccgaaccggatgcacggtttcgccgtcgtctccggtgaccgcaacccgatccacaccgac
gcctcggcggccaagctggccggactcggtgagccgatcgtgcacggcatgtggctgtcg
gccgccgctcagcaggtggtcaccgccaccgactcgaagaacccgacaccgtcgccgcgt
ccgctgatcggctggacggcacgttatctgggcatggtgcgcctcggcgacaccatcacc
gtgcgcgtcgaccgcgtcggcctcgacaacggccgcgaggtcgtcgaggtcagcgccaag
gtcggcgacaacctggtcatgagcgccaccggcctgctggccgccccgcgcaccgtctac
gcgttcccgggccagggcatccagagcaagggcatgggtctcgacgcacggtcgcgctcg
aaggccgcccgtaagatctgggaccgcgccgacaagcacacccgccaggcgctcggcttc
tcgatcctggccgtcgtgcgggacaacccgacgaccctggtcgccaacggcaccacctac
aaccaccccgacggcgtgctgtacctgacgcagttcacccaggtcgccatggcgacgctc
ggtgtcgcgcagatcgccgagctcaaggaagccggcgggtttgtcgagggcgccatcacc
tgtggtcactcggtcggtgagtacaacgcactcgcggcctgcgccggtgtcctgccgctc
gaggccgtcctcgaggtcgtgttccagcgcggcgaggccatgcaccatctcgttccccga
gatgagcagggtcgcagcgactaccgcatggccgccatccggccgagccagttcggactc
gccgacgccgacgtgaccggcttcgtggccggcctcggcgaggagatcggggagttcctc
gaggtcgtcaacctcaacctgctcggttcgcagtacgcgatcgccggaacggtccgcggc
ctggaacacctcgaggccgagatcgaccgtcgccgtgcggaattcggcggcaagcgggcc
ttcatcgtcatcccgggtatcgacgtcccgttccactccagcgtgctgcgcgcgggtgtg
ccggagttccgcggcaagctcgaggaactgctgcccaccgacatcgacatcgatatcctg
atcggtcgctacatcccgaacctggtgccgcgcctgttcaacctcggacgcgacttcgtc
gaggagatcgcggcactcgtgccgtccgatccgctgaacgccgttctcgccgactgggac
tcctggaccgcgaagcccgccgagctggcccgtgtcctcctgatcgagctgctcgcctgg
cagttcgcgagcccggtgcgctggatcgagacccaggacctgctgttcagcggtccggag
cgcaacggtctcggcgtgcagcgcttcgtcgagatcggtttgaagggtgcccccaccctg
accggtctggcgaacaacaccctcaagctcgacgactacgcctcggccaccaccgaggtc
gtgaacgtcgaacgcgactccgacgtgatcctggccaaggacgccggccacgagccggac
gaggacgagatcgacgcccccgcggcctcggccgacgctccggcggaggcggctcccgcc
gcggcggcaccggctccggcggcagctccggctgcccccgccggcggcccgcgtcccgac
gacatcgccttcaccccgtcggatgcggtgaagtccgtgatcgcgctgtggaccaagatg
cgcgtcgaccagatcggtgcggccgacaccatcgaggcgctgtgtgacggtgtgtcctca
cgtcgcaaccagctcctgctcgacatcggcggcgagctcggactcggcgccatcgacgga
gcggccgaggccgacatggtcgcgctggcatcgaccgtggagaccctggcgcgcggctac
cggccgctgggtccggtcctgaccgacgccgtcagcgaccagatccgcaaggtcctcggc
ccagtgggcaagcgccagaactacatcaccgaccgggtcgccaacgtgtggcagctcgga
cccggctggggcctgcacgcgaccgtggcgctcgccctcggtacccgggacggtgcctcg
gtccgcggcgaggcactgggcaacctgctcgacggcccggtcgccaacgccgacgcgctc
gacgcgctgatcgacaaggcggtcaccgccgtgggtgccgagaagggcattgcggtgagc
aagcccgccggcgaatccggcggcggcgcaacggtcgacgcggccgctctcggtgagttc
accgagcagatcaccggtcgctcgggagcgctcgcctcggcggcctacacggtgctggag
aagctgggactcgccgaggtcgccgatctcgccgaggccgcggccgaccccaacgccgag
ctcgccgaactcgtcagtgccgaactcggatcggactgggcgcgcaccgtcgcaccggcg
ttcgacgacgccaagatcgtcctgatcgacgaccggtgggcaaccgcccgtgaggatctc
gtccgtctctggctgaccgacgagcacgagctcgacgccgacttcgagaaggtcgtcgac
gggttcgtcggagccggtgacaccgtcgccgaacacgccacctggtggcagggcaaggcc
ctcgcgagcggaaacgccgtgcacggccgcgtcttcggggcgatcgcgcacgctgccgag
aacccggagaagggcatctacagccgcgagatcgccgtcgtcaccggcgccagcaagggc
tcgatcgccgcgggtgtggtggccggcctcctcgccggtggcgcgaccgtcatcgcgacg
acctcgcgactgaactccgagcgtctggccttctacaagaagctctaccgcgagaacgcc
cgcaccggtgccgcgctgtggatcgccccggcgaacatggcgtcgtacaacgacgtcgac
gacctggtcgagtgggtcgcgacggaacagaccgagaacctcggcggcacgaccgcggtg
gtgaagccggccatgaagccgacgatgctgttcccgtttgccgccccgcgggtggccggc
gatctcaccgacgccggtgctcgcgccgagctcgagatgaaggtcctgctctggtcggtc
gagcggctcatcgccggtctggcggaggtccactccgaccacgacatcgcggcccgcctc
cacgtggtcctgcccggttccccgaaccgcggcatgttcggtggcgacggcgcctacggc
gagagcaaggccgccctcgacgcgctcgtgacgcgctggtcggcggaggagtcgtggggg
tcgaagaccaccctggcccacgctctcatcggctgggtgcgcggcaccgggctgatgggc
cacaacgacggcatggtcgacgcggtcgaggccgccggtgtccgcacctggagcaccggg
gagatggccgccaacctgctgacgctgtgcacgcccgagcagcgtgcgtccgcggtcggc
gcgcccgtcctggccgacttcaccggcgggctcgacgcctcgaccgacctcaaggcgctc
gcggccaccgctgcagccgctgccgagggcgccgaggactccgacgaggcaccggcgtcg
accaccgtcgccgcgctcccggcacctgcccgcgcaccgcgcggcatgcgtccggactgg
ccgtcgatcgacgctcgtcccgaggacctggtggtcatcgtgggtgccggcgagctcgga
ccgtacggttcggcacggacccgtttcgagatggaggtcgacgagaagctctcggcggca
ggtgttctcgagctggcctggaacaccggtctgatccactgggattcggctccgaagccg
ggctggtacgacaccgagtccggtgatccggtgccggagagcgagatcgccgagcgctac
cacgacgaggtcgtctcgcggtgcggcatccgccgctacgccgatgacggcgcgatggtc
gacaacacctcgccgctgctcacctcggtattcctcgacggggatctgaccttcaccgtc
aactcggaggccgaggcccgtgcgttcgccagtgccgaccccgagaagacccgggtgacg
cagaaccccgacggcgactggcaggtcacccgcctggccggcacggagatccgtgtgccg
cgcaagttctcgctgacccgtacggtcggcggtcagatcccgaccggtttcgacccgacg
cgctggggcgtcagccctgacatggtcgaggcgatcgaccgggtcgcgttgtggaacctg
gtcgccaccgtcgacgcgttcctgtcgtccggcttcacaccgagtgaactgatgcggtgg
gtgcaccccggcctcgtggccaacacccagggcaccggtatgggcggcatggcgtcgatg
cgagacctgtacgtcaacaccctgctcggtgaggccaacgccaacgacatcctgcaggag
gcgctgccgaacatcgttgcggcacacgtcgtccagtcctacgtcggcagctacggcgcg
atgatccacccggtcgcggcgtgcgccacggcggcggtgtcggtcgaggagggcgtcgac
aagatccgcctcggcaaggcgctcttcgcagtggccggtggattcgacgatctcggcatc
gagggcatcgtcggcttcggcgcgatgtcggcgaccgctgattcggcgaagatgaccgca
cgcggcatcgacgaccgccggttctcgcgagccaacgaccgtcgacgcggcgggttcgtc
gagtcggccggtggtggcacgatcctgctcgcccgcggcgatgtcgcggcgcagatgggt
ctgccggttctcggtgtggtggcgtgggcgcagagcttcggcgacggcgtgcacacctcg
atcccggctccgggactcggtgcgctgggcgccgcccgcggcgcactgtcctccccgctg
gccaacgccctgagcgtgctcggggtcggcgccgatgacgtcgcgctggtctccaagcac
gacacgtcgacgaaggccaacgatcccaacgagtccgagctgcacgaacggctcgccgag
gcgatcggacgcggtacgggcgccccgctgttcgtggtgtcgcagaagtcgctcaccggt
cacgccaagggtggcgctgccgccttccagctgatcggtctgtgccagatgctccgtgac
ggcgtcatcccgccgaaccgcagcctggactgcgtcgacgagaagatgaaggagtacccg
cacctggtctggccgcgcgagaccctgcagctgggcgagcggttcccgctcaaggccggt
ctcctgaccagccttggcttcggccacgtgtccgggctcatcgcggtcgtccatccggag
gcgttcatcgcctccctggcacccgaggagcgggagacctaccggcagcgcgccgacgag
cgtgcacgtctgggcagccagcgcttcctgcagtcgatctgcgggggcgagcctgcctac
cagcgtccgccgaaccgccgcttcgacgagtcggtcgacgagcacgacgccgaggcgggc
atgctgctcgatccgtcggtgcgtctcgacgaggcggatgtgtacggttccggtcgggtg
ccggaaaaccgttga
DBGET
integrated database retrieval system