Gordonia amicalis: IHQ52_12945
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Entry
IHQ52_12945 CDS
T08222
Name
(GenBank) fumarate reductase/succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
gami
Gordonia amicalis
Pathway
gami00020
Citrate cycle (TCA cycle)
gami00190
Oxidative phosphorylation
gami00650
Butanoate metabolism
gami00720
Other carbon fixation pathways
gami01100
Metabolic pathways
gami01110
Biosynthesis of secondary metabolites
gami01120
Microbial metabolism in diverse environments
gami01200
Carbon metabolism
Module
gami_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gami_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gami_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
IHQ52_12945
00650 Butanoate metabolism
IHQ52_12945
09102 Energy metabolism
00190 Oxidative phosphorylation
IHQ52_12945
00720 Other carbon fixation pathways
IHQ52_12945
Enzymes [BR:
gami01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
IHQ52_12945
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
DAO
GIDA
Thi4
NAD_binding_8
FAD_oxidored
AlaDh_PNT_C
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
UKO89994
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Position
2808136..2810064
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AA seq
642 aa
AA seq
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MTEPERYQYDVVVIGAGGAGLRAVIEAREKGYSVAVVCKSLFGKAHTVMAEGGCAASMGN
ANAKDNWATHFQDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTADGRIAQRN
FGGHTYPRLAHVGDRTGLELIRTMQQKIVSLQQEDFAATGDYESRIKVFAECTITELLKD
GDAIAGAFGYWRESGRFIVFEAPAVVVATGGIGKSFKVTSNSWEYTGDGHALALRAGASL
INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNTDGKRFMFDYIPPVFKGQYAETE
DEADEWLADNDSARRTPDLLPRDEVARAINEEVKAGRGTEHGGVYLDIASRMPAEEIIRR
LPSMHHQFKELADVDITAEPMEVGPTCHYVMGGIEVDPDTGASRVPGLFAAGECSGGMHG
SNRLGGNSLSDLLVFGRRAGLGAASYVESLGNRPGIAQDDIDRAARYALSPFDPPADGKP
ENPYTLHMDLQQAMNDLVGIIRKEDEMQEALRVLADLRNRLGDMQVEGHRQFNPGWHLAI
DLRNMLLVSECVAKAALMRTESRGGHTRDDHPSMDSDWRNTLLVCTADIGDGSPVPEVDV
VKQEQTPMRPDLLELFDFAEIEKYYTAAEIAGHPDAVGRQEN
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaccggaacgctaccaatacgacgtcgttgtgatcggtgcgggtggtgccggt
ctgcgggcggtcatcgaggcccgggaaaagggatattccgtggccgtggtgtgcaagtcg
ctgttcggcaaggcgcacaccgtgatggccgagggtggttgtgcggcgtcgatgggtaac
gcgaacgcgaaggacaactgggcgacccacttccaggacacgatgcgcggcgggaagttc
ctcaacaactggcggatggccgaactccacgccaaggaagcacccgatcgtgtgtgggag
ctggaaacctatggggcgctgttcgacaggaccgccgatggtcgaatcgcccagcgcaac
ttcggcggtcacacctacccgcggctggcgcatgtcggtgaccggaccggactggaactc
atccggacgatgcagcagaagatcgtgtctctgcagcaggaggacttcgcggcgaccggc
gactacgagtcgcggatcaaggtcttcgccgagtgcaccatcaccgagctgctcaaggac
ggcgacgccatcgccggcgcgttcggttactggcgggagtccgggcggttcatcgtgttc
gaggcgcctgccgtggtggtcgcgaccggcgggatcggcaaatccttcaaggtgacgtcg
aattcctgggagtacaccggtgacggccacgctctcgccctgcgcgccggcgcgagcctg
atcaacatggagttcgtccagttccatccgaccgggatggtgtggccgcccagcgtgaag
ggcatcctggtgaccgagggcgtccgcggtgacggcggagtcctgaagaacaccgacggc
aagcggttcatgttcgactacatcccgccggtgttcaaggggcagtatgccgagaccgag
gatgaagccgacgagtggctggccgacaacgactctgcccgccgcacacccgatcttctt
ccacgtgacgaggtcgctcgggcgatcaacgaggaggtcaaggccggtcgcggaaccgaa
cacggcggcgtctacctcgacatcgcctcccggatgccggccgaggagatcatccgcaga
ctcccgtcgatgcatcaccagttcaaagagctcgccgacgtggacatcaccgccgagccg
atggaggtgggccccacctgccactacgtgatgggtgggatcgaggtcgatccggacacc
ggcgcctcccgggtaccgggtctgttcgctgccggcgagtgctctggggggatgcacgga
tcgaatcggttgggcggtaactcgttgtcggacctgctggtcttcggtcgacgcgccggg
ctcggcgcggcgtcgtatgtcgagtcactgggcaaccggcccggaatcgcccaggacgac
atcgaccgcgcggcgagatacgcgctctcgccgttcgatccgccggccgacggcaaaccg
gaaaacccctacacgctgcacatggatctgcagcaggcgatgaacgatctcgtgggcatc
atccgtaaggaagacgagatgcaggaagcgctgcgagttctggccgaccttcgaaaccgg
ctcggcgacatgcaggtcgaaggtcaccggcagttcaacccgggctggcatctggcgatc
gatctccggaacatgttgctggtcagcgagtgtgtggcgaaagcggccctcatgcgtacc
gagagtcgcggcggacacacgcgcgacgaccacccgtcgatggactcggactggcgcaac
acactgctggtgtgcaccgcggacatcggcgacggctccccggtccccgaagtcgacgtc
gtgaagcaagaacagaccccgatgcgtccggatctcctggagttgttcgacttcgccgag
atcgagaagtactacaccgccgctgaaatcgccggccaccccgatgccgttggtaggcag
gagaactga
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