Gordonia amicalis: IHQ52_13335
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Entry
IHQ52_13335 CDS
T08222
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
gami
Gordonia amicalis
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gami03036
]
IHQ52_13335 (xerD)
Chromosome and associated proteins [BR:
gami03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
IHQ52_13335 (xerD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
MOR2-PAG1_mid
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
UKO90057
LinkDB
All DBs
Position
2914842..2915759
Genome browser
AA seq
305 aa
AA seq
DB search
MTIAAAISRFLDHLTVERGAAANTVSSYRRDLERYRRYLESRDIASIDAVTEEDVREFLV
DLRRGDPDAGFPPLADSSIARTVVATRRFHKFAVDEGMVATDVAQAVRPPRPARRLPKSL
PVDEVLAILEAAGAEDHPRALRDRALLEFLYSCGARISEATSLDIDDLDLDTRAVRLRGK
GGKERLVPLGGPAIDAIDAYLVRGRPALVSRATPALFLNARGGRLSRQSAWQVLVTAAER
AGLDKAVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQVYTLVTVNTMREVYAVA
HPRAR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgacgatcgccgccgccatctcgcgcttcctcgatcacctcaccgtcgaacgaggtgcg
gcggccaacaccgtgtcgtcctaccgtcgtgatctcgagcggtaccggcgatatctcgaa
tcgcgcgacatcgcgtcgatcgacgcggtgaccgaggaggacgtgcgtgaattcctcgtc
gacctgcgtcgaggggatccggacgccgggttcccgcccctcgcggacagctcgatcgcg
cgaaccgtggtggcgaccaggcgctttcacaagttcgcggtcgacgaggggatggttgcg
acggacgtcgcgcaggcggtccgtccgccgaggccggcgcgccgtctcccgaagtcgctg
cccgtcgacgaggtgctggccatcctcgaggccgccggtgccgaagatcatccccgcgcc
ctgcgcgatcgcgccctgctggaattcctctacagctgcggcgcccgcatctccgaggcc
acctcgctcgacatcgacgacctcgacctcgacacccgggcggtacgcctacggggcaag
ggcggcaaggagcgtctcgtcccgctgggcggaccggcgatcgacgccatcgacgcctat
ctcgtccgcggccgtcccgcgctggtgtcgcgggcgacgccggcgctgttcctcaatgcc
cggggcgggcgactctcgcgtcagtcggcgtggcaggtactggtcaccgccgccgaacgt
gccgggttggacaaggccgtctccccgcacaccctgcggcacagcttcgcgacccatctc
ctcgacggcggcgccgacgtccgcgtcgtccaggagctgctcggacacgcctcggtgacc
accacgcaggtgtacacactcgtgacggtgaacacgatgcgcgaggtgtatgccgtcgca
catccgcgtgcccgctga
DBGET
integrated database retrieval system
