Gordonia amicalis: IHQ52_13440
Help
Entry
IHQ52_13440 CDS
T08222
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
gami
Gordonia amicalis
Pathway
gami02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IHQ52_13440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gami02000
]
IHQ52_13440
Transporters [BR:
gami02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
IHQ52_13440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UKO90073
LinkDB
All DBs
Position
2937090..2938757
Genome browser
AA seq
555 aa
AA seq
DB search
MFRSVRSRRTRALLAVGLSAATLLSACGERPATGDGTSRGVPAAAGEYVDGGVIEYGHEQ
EPPCIHGGWVQNAYLARQYLDNLVSLDDNGTPVPWLATSWEISPDRKTYTFRLKPDVKFS
DGTDLDAAAVKTNFDKYLDPDAPNGTVMAYIGQYYAGGEVIDRNTYALHLKQPYSPLLTV
LTQGYFGIQSPTALARGKKANCSQPVGSGPFIIERWDRNRSITFVRNPNYNSAPANARHQ
GPAYVDKVIWKFLKDPVLRYGSLTSGSSDVIYNVPPINWADATTRFQTKQYVTPGRPNAI
TLNVAHAPFDDVRVRQAFAYSADREKAVETAFLGVVPFNSNGALSQSTPDYDPSAGAYDR
DPDKANALLDEAGWTSRDDDGVRTKDGRRLTARLVYAADAIVGPEGAAILQNIAYQARDV
GFDIELVPATQSEYFGGNYAKPDTYDAYVGYWTSPTPGLLYINWRQRLEDSPNPHNTAYY
NDPTLQGLIEKANSSADPAEQREFYSQAQKLIGDQALSIGLYTQTTSIAANPKLHDVWVE
KSQGELVFADARFVR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
gtgttcagatctgtccgttccagacggacccgagccctcctggcggtgggtctgtcggcc
gccactctgctgtcggcgtgcggcgagcgtccggcgaccggcgacggcacatcgcggggc
gttcccgcggcggccggcgagtacgtcgacgggggcgtcatcgagtacgggcacgagcag
gaaccgccgtgcatacacggcggctgggtccagaacgcctatctcgcacggcaatacctc
gacaatctcgtctcgctcgacgacaacgggacgccggtgccgtggctggcgacgagctgg
gagatctcgcccgaccgaaagacctacaccttccgcctgaagcccgacgtgaagttcagc
gacggaaccgatctcgacgcggctgcggtgaagaccaacttcgacaagtacctcgatccg
gacgcacccaacgggacggtgatggcctacatcggccagtactacgccgggggagaggtc
atcgaccgcaacacctacgcgctgcatctcaagcagccgtacagtccgctcctgaccgtt
ctcacccagggctacttcggaatccagtcgcccaccgcgctcgcgcgtgggaagaaggcg
aactgctcgcagccggtcggatcgggaccgttcatcatcgaacgctgggatcgcaaccgc
agcatcaccttcgtgcgcaacccgaactacaactcggcgccggccaatgcgagacatcag
ggaccggcctacgtcgacaaggtgatctggaagttcctcaaggacccggtactccggtac
ggctccttgaccagtggttcgtccgacgtcatctacaacgtcccgcccatcaactgggcc
gacgcgacaacgcgattccagaccaagcagtacgtgaccccgggtcgccccaacgcgatc
acgctcaacgtcgcccacgcaccgttcgacgacgtccgggtgcgccaggcgttcgcgtac
tccgcggaccgcgagaaggcggtggagactgcgtttctcggtgtggtgccgttcaactcg
aacggcgccctcagtcagagcactcccgactacgatccgtccgccggcgcgtatgatcgc
gacccggacaaggcgaacgccctgctcgatgaggcggggtggacttcgcgtgacgacgac
ggcgtccgcaccaaggacggtcggcggctgaccgcgcggctcgtgtacgcggccgatgcc
atcgtcggacccgagggtgcggcgatcctgcagaacatcgcgtaccaggcccgcgacgtc
ggcttcgacatcgaactcgtcccggcgacgcagagcgagtacttcggcggcaactacgcc
aagccggacacctacgacgcctacgtcggctactggacgagtccgactcccggcctgctc
tacatcaactggcgccagcggctcgaggactcacccaacccgcacaacacggcctactac
aacgatcctactctccagggactgatcgagaaggccaacagctcggcagaccccgcggaa
cagcgcgagttctacagtcaggcccagaagctgatcggtgaccaggcgctgtcgatcggg
ctgtacacacaaacgacctcgatcgcagcgaacccgaagctgcacgacgtgtgggtcgag
aaatcccagggtgaactggtgttcgcggatgcgaggtttgtgcgatga
DBGET
integrated database retrieval system
