Gordonia amicalis: IHQ52_14635
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Entry
IHQ52_14635 CDS
T08222
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gami
Gordonia amicalis
Pathway
gami03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IHQ52_14635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gami03400
]
IHQ52_14635
Enzymes [BR:
gami01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
IHQ52_14635
DNA repair and recombination proteins [BR:
gami03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IHQ52_14635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF3079
Motif
Other DBs
NCBI-ProteinID:
UKO90292
LinkDB
All DBs
Position
3189096..3189749
Genome browser
AA seq
217 aa
AA seq
DB search
MAFPGAERFLPDSHDLDDLVEAARTCRGCDLYKAADQTVFGAGSPGSTIMFVGEQPGDQE
DRAGKPFVGPAGRVFDRALDAAEIDRELTYVTNAVKHFKFTRAAGQKRRIHDKPSRTEVV
ACRPWLLAELDAVAPRIVVCLGATAAQALLGSTFRLTRHRGERFDLAADGDVGPDYAVDV
LATVHPSSILRGPSDKRDRAFDEFVADLRVVRELLQP
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggcattccctggggcagaacggttcctgccggactcgcacgatctcgacgacctggtc
gaggccgcccgcacgtgccgcggctgcgacctctacaaggcggctgatcagaccgtcttc
ggagccggatctccgggttcgacgatcatgttcgtcggcgaacaacccggggatcaggag
gatcgggcgggcaaaccgttcgtcggtccggcgggacgggtgttcgatcgtgccttggac
gccgccgagatcgatcgcgaactcacctacgtcaccaatgcggtgaagcatttcaagttc
actcgcgcggccggccagaaacgtcgaatccacgacaagccgtcgcgtaccgaagtggtg
gcgtgccgaccgtggttgctggccgaactcgacgccgtcgcaccccgaatcgtggtatgc
ctcggcgcgaccgccgcccaggcgttgctcgggagcacgttccggctgacccggcaccgg
ggcgaacgattcgatctggccgccgacggtgatgtcggacccgactacgccgtggacgtg
ctggcgaccgtccacccgtcgtcgatcctgcgcggaccgtcggacaaacgtgaccgggcc
ttcgacgagttcgtcgccgacctacgggtggtgcgggaactgctgcaaccctga
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