Gordonia amicalis: IHQ52_16375
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Entry
IHQ52_16375 CDS
T08222
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
gami
Gordonia amicalis
Pathway
gami00750
Vitamin B6 metabolism
gami01100
Metabolic pathways
gami01240
Biosynthesis of cofactors
Module
gami_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
IHQ52_16375 (pdxS)
Enzymes [BR:
gami01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
IHQ52_16375 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NanE
NMO
IGPS
Glu_synthase
FMN_dh
DHO_dh
TetR_C_27
Motif
Other DBs
NCBI-ProteinID:
UKO94125
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Position
complement(3585809..3586657)
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AA seq
282 aa
AA seq
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MAEMLKGGVIMDVVTPEQAKIAEDAGAVAVMALERVPADIRAQGGVSRMSDPDMIDGIIS
AVSIPVMAKARIGHFVEAQILQSLGVDYVDESEVLTPADYSNHIDKWAFTVPFVCGATNL
GEALRRITEGAAMIRSKGEAGTGDVSNATTHMRKIRDEIRRLTSLPKDELYVAAKELQAP
YDLVVEVAEAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFVGSGIFKSGNPAQRAAAIV
QATTFHDDPDVLAKVSRGLGEAMVGINVDDIPQPHRLAERGW
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggccgagatgctcaagggcggcgtgatcatggatgtggtcacccccgagcaggcgaag
atcgccgaggacgccggcgcggtggccgtgatggctctcgagcgggtgcccgccgacatc
cgcgcccagggtggggtctcgcggatgagcgacccggacatgatcgacgggatcatctcc
gcggtgtcgatcccggtgatggccaaggcgcgcatcgggcatttcgtcgaggcgcagatc
ctgcagagtctcggcgtcgactacgtcgacgagtccgaggtgctgaccccggccgactac
tccaaccacatcgacaagtgggcgttcaccgtgccgttcgtgtgcggtgcgaccaatctg
ggtgaggcgctgcgtcgcatcaccgagggtgcggcgatgatccgttccaagggtgaggcc
ggtaccggtgacgtgtccaacgccaccacgcacatgcgcaagatccgcgacgagatccgc
cgcctgacgtcgctgccgaaggacgagttgtacgtggcggcaaaggaactgcaggctccc
tacgacctggtggtcgaggtcgccgaggccggcaagctgccggtgacgctgttcaccgcc
ggcggtatcgccaccccggcggatgcggcgatgatgatgcagctcggcgccgagggcgtg
ttcgtgggttcggggatcttcaagtccggcaacccggctcagcgtgcggccgcgatcgtg
caggccaccaccttccacgacgaccccgacgtgctggcgaaggtctcgcgcggtctgggc
gaggccatggtcggcatcaacgtcgacgacatcccgcagccgcaccgcctggccgagcgc
ggctggtga
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