Gordonia amicalis: IHQ52_17105
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Entry
IHQ52_17105 CDS
T08222
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gami
Gordonia amicalis
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gami03016
]
IHQ52_17105 (truB)
Enzymes [BR:
gami01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IHQ52_17105 (truB)
Transfer RNA biogenesis [BR:
gami03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IHQ52_17105 (truB)
Prokaryotic type
IHQ52_17105 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
UKO90734
LinkDB
All DBs
Position
complement(3740740..3741660)
Genome browser
AA seq
306 aa
AA seq
DB search
MADATIEKAGLLIVDKQAGITSHDVVSRCRKIFDTRRVGHAGTLDPMATGVLVVGIERAT
KLLGLLSLTTKSYTATIRLGASTTTDDREGEILTTADASGVSDDEIASAVADLTGDIQQV
PAKVSAIKVDGRRAHALVRTGAEFDLQARPVTVSRFDVLATRRAGDTDNDTAGVVDLDVA
VDCSSGTYIRSLARDLGAALGVGGHLTALRRTAVGPFTLEHARTLDEVREDGRVSLDIDE
AVKLSFPRRDISDDEAESISQGRWLEPIGMKGVYVVVDPHEQAIALIQEKGRRASSVMVV
RPATLR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgcaaccatcgagaaggccggtctgctcatcgtggacaagcaggccgggatc
accagccacgacgtcgtctcgcggtgccgcaagatcttcgacacccgccgggtcggccac
gccggcaccctcgacccgatggccaccggcgtcctcgtcgtcgggatcgagagggcgaca
aagcttctcggtctgctgtcgctgaccaccaagtcctacaccgcgaccatccgcctcggt
gcctcgaccaccacggacgaccgcgagggcgagatcctcaccaccgcggacgcctccggt
gtcagcgacgacgagatcgcctcggccgtcgccgatctcaccggcgacatccagcaggtt
ccggcgaaggtctcggcgatcaaggtcgacggccggcgcgcgcatgcgctcgtccgcacc
ggcgccgagttcgacctgcaggcccggccggtcaccgtgtcacgattcgacgtcctggcc
acgcggcgtgcgggggacaccgacaacgacaccgcgggcgtcgtggatctcgatgtcgcg
gtggactgttcgtcgggcacctacatccggtcgctcgcacgcgatctcggtgccgccctc
ggcgtcggtgggcacctgaccgcgttgcgccgtaccgccgtggggcccttcaccctcgaa
cacgcccgcacgctcgacgaggtccgcgaggacggccgcgtcagcctcgacatcgacgag
gcggtgaagctgtcctttccccgccgcgacatcagcgacgacgaggccgaatccatcagc
cagggacgatggctcgagccgatcggcatgaagggcgtctacgtcgtcgtcgacccgcac
gagcaggccatcgcgctcatccaggagaagggccgccgggcgagttcggtgatggtggtg
cgtccggccaccctgcgctag
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