Gordonia amicalis: IHQ52_17530
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Entry
IHQ52_17530 CDS
T08222
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
gami
Gordonia amicalis
Pathway
gami02024
Quorum sensing
gami03060
Protein export
gami03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
IHQ52_17530 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
IHQ52_17530 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IHQ52_17530 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gami02044
]
IHQ52_17530 (ffh)
Enzymes [BR:
gami01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
IHQ52_17530 (ffh)
Secretion system [BR:
gami02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
IHQ52_17530 (ffh)
Eukaryotic Sec-SRP protein
IHQ52_17530 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
cobW
CbiA
AAA_22
MeaB
AAA_24
AAA_31
APS_kinase
ArsA_ATPase
Zeta_toxin
TctA
nSTAND3
NPHP3_N
AAA_18
AAA_16
NTPase_1
Thymidylate_kin
6PF2K
AAA_33
TsaE
MobB
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
UKO90808
LinkDB
All DBs
Position
complement(3826530..3828092)
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AA seq
520 aa
AA seq
DB search
MFDSLSDRLTGALKDLRGKGRLSDADIDRTCREIRLALLEADVSLPVVRAFIARIKERAK
GAEVSAALNPAQTVVKIVNEELIGILGGETRRVRFAKNPPTVIMLAGLQGAGKTTLAGKL
GKWLKQQGHTPLLVACDLQRPGAVSQLQIVGERAGVQVFAPHPGTSVGGEGTLGVTSGDP
VSVARAGVEEAKNKHYDVVVIDTAGRLGIDAELMKQASDIRDATAPDEVLFVVDAMIGQD
AVTTAEAFADGVGFTGVVLTKLDGDARGGAALSVREVTGQPIMFASSGEKLEDFDVFHPD
RMASRILGMGDVLSLIEQAEQHWDAQQAEAAAAKITQGDLTLEDFLDQMLMIRKMGPIGN
ILGMLPGAGQMKDVLSQVDDKQLDRVQAIIRGMTPAERENPKIINASRRLRIANGSGVTV
SEVNQLVDRFFEARKMMAQMSGRMGMGGMNRKSNRKGKKGKKGKGRGPTPPKVRGGFPAM
PGGMPAGFPDLSDMPAGLDQLPPGLEGIDVSQFQQPKKKK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgttcgattccctctccgaccggttgaccggtgccctgaaggacctgcgtggcaagggg
cggctctccgacgccgacatcgaccgcacctgccgcgagatccggctcgccctgctcgag
gccgacgtctcgctgccggtggtgcgcgccttcatcgcgcggatcaaggaacgggcgaag
ggcgccgaggtctccgcggcgctgaacccggcccagacggtcgtcaagatcgtcaacgag
gagctcatcggcatcctcggcggcgagacccgtcgggtgcgcttcgcgaagaacccgccc
acggtcatcatgctggcgggtctgcagggtgccggtaagacgaccctcgccggcaagctg
ggcaagtggctcaagcagcagggccacacaccgctgctggtggcctgtgacctccagcgt
ccgggcgccgtctcgcagctgcagatcgtcggcgagcgtgccggcgtccaggtcttcgcg
ccgcacccgggcaccagcgtcggcggtgagggaacactcggcgtcacctccggtgacccg
gtctccgtcgcgcgcgccggtgtggaggaggcgaagaacaagcactacgacgtcgtcgtc
atcgacaccgcgggccgcctcggtatcgacgccgagctgatgaagcaggcctccgacatc
cgtgacgcgaccgctcccgacgaggtgctgttcgtcgtcgacgcgatgatcggtcaggac
gcggtcacgaccgccgaggccttcgccgacggcgtcggcttcaccggtgtggtgctcacc
aagctcgacggcgacgcccgcggcggtgccgccctgtcggtgcgcgaggtcaccggtcag
ccgatcatgttcgcgtcctccggtgagaagctcgaggacttcgacgtcttccaccccgac
cgcatggccagccggatcctcggcatgggcgacgtgctcagcctcatcgagcaggccgaa
cagcactgggacgcacagcaggccgaggccgccgcggccaagatcacccagggtgacctg
accctcgaggacttcctcgaccagatgctgatgatccgcaagatgggtcccatcggcaac
atcctcggcatgctccccggcgccggccagatgaaggacgtgctgagccaggtcgacgac
aagcaactcgaccgggtccaggcgatcatccgcggcatgacccccgccgagcgggagaac
ccgaagatcatcaacgcctcccgccggctgcgtatcgccaacggttccggcgtcaccgtc
agcgaggtcaaccagctggtcgaccgattcttcgaggcccgcaagatgatggcgcagatg
tccggtcgcatgggcatgggcgggatgaaccggaagtccaaccgcaaggggaagaagggc
aagaagggcaaggggcgcggtcccactccgccgaaggtgcgcggtggtttcccggcgatg
ccgggcggcatgcccgccgggttcccggacctgtccgacatgcccgccggactcgaccag
ctgcccccgggactcgagggcatcgacgtctcgcagttccagcagcccaagaagaagaaa
tag
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