Gordonia amicalis: IHQ52_17555
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Entry
IHQ52_17555 CDS
T08222
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
gami
Gordonia amicalis
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gami03036
]
IHQ52_17555 (smc)
Chromosome and associated proteins [BR:
gami03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
IHQ52_17555 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
SbcC_Walker_B
FapA
Motif
Other DBs
NCBI-ProteinID:
UKO90813
LinkDB
All DBs
Position
complement(3834279..3837887)
Genome browser
AA seq
1202 aa
AA seq
DB search
MHLKSLTLKGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALTWVMGEQGAKALRGGK
MQDVIFAGTSGRPPLGRAEVTLTIDNADGALPIEYSEVSITRRMFRDGAGEYEINGSTCR
LMDVQELLSDSGIGREMHVIVGQGRLSAILESRPEDRRAFIEEAAGVLKHRKRKEKAVRK
LDAMQANLARLTDLTAELRRQLKPLGRQAEVARRAQTVQADLRDARLRLAADDLVIRRAE
MAEHAAVEDEVRRRQDEVAAELDRANAEVTEHEQHLAEVTPAAAAASRAWFRLSALAERV
DATRRVAAERSRYLSEAATEATGPDPEELEEQALEAAELEAELTEGVEIAAEQLETAREV
LRERESIAEAAEAAHLAAVQAIADRREGLARLEGQVDNLRTRSEGVDAEADRLTAAIAHA
TERAESAAMQQDSAAGELAQLEASEQALDEHHERCVTALNLSNERVATLQAQHREAEQSI
ASLSARVEALAMGLERNDGGAWLLDNAPDGLLGPMSELVTVEPGFETAIAGALGPAVDGI
VTVDGMAAIRALEALKSGDGGRAALICGGLTDSVRQRDAALPEGARWASSAVTCGPEIRT
AIDTVLADTVVVDDPARGLELARSLGVRVVTHAGDRIGPASIEGGSSRRPSTLEVQSAID
AATEDLAATRRRVEELEAALDGALTEQRERREAAEEALAALHESDSSVGAAYEQMARLGH
EIRTARAEADRFTRQRNLLEKGRAETLESLRELEERLRLARDESDSGPEMAADDSERSTA
AAAVGIARGTEMEARLALRTAEERLSSVRGKADSLRRAAQREREARERARRQDEIRRQAA
GVAVAVERAGAQVAERLAAAVASAQAGRDELEELRVARSATLDELRLKSGELTTTLNSLR
DTVHRDEVARAQVALRIEQLEEQILETFAMSPDDLIAEYGPDVPMPPSALEMQEYEEAKA
RGEQVVAPAPMPYDRATQEARAKKAQKDLNTLGKVNPLALEEFAALEERYNFLSSQLEDV
KAARKDLLDVVEDVDARILQVFTEAYADVEREFGQVFQTLFPGGEGRLVLTEPNDMLTTG
IEVEARPPGKKVKRLSLLSGGEKSLTAVAMLVAIFRARPSPFYVMDEVEAALDDTNLRRL
IKLFEQLREKSQLIVITHQKPTMEIADALYGVSMRGDGITTVISQRMRGVNMPVAQQEDT
SQ
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
gtgcacctcaaaagcctgaccctgaagggcttcaagtcgttcgcctcggcgacgaccctg
cgcttcgagccgggcatcacgtgcgtcgtcggccccaacggctccggtaagtccaatgtc
gtcgacgccctgacctgggtcatgggcgagcagggcgccaaggcgctgcgcggcggcaag
atgcaggacgtgatcttcgccggcacctccggacgtccgccgctgggacgtgcggaggtg
acgctcaccatcgacaacgccgacggcgcgctcccgatcgagtactccgaggtctcgatc
acccgccgcatgttccgcgacggcgcgggcgaatacgagatcaacggcagcacctgtcgc
ctcatggatgttcaggagctgctctccgactccggtatcggccgcgagatgcacgtcatc
gtcggtcagggtcgtctgtcggcgattctcgagtcgcgtccagaggaccgtcgcgcgttc
atcgaggaggcggccggcgtcctcaaacaccgcaagcgcaaggaaaaggcggtccgcaag
ctcgacgcgatgcaggccaacctggcgcgcctgaccgacctcaccgccgaactgcgacgc
cagctcaagccgctcggccggcaggcggaggtcgcccgccgcgcgcagaccgtccaggcc
gacctccgtgacgcccgactgcgcctcgccgccgacgacctggtcatccggcgcgccgag
atggccgaacacgccgccgtcgaggacgaggtgcggcgccgccaggacgaggtggccgcg
gaactcgaccgcgccaatgccgaggtgaccgagcacgagcagcatctcgccgaggtcacc
ccggcggccgcggcggccagccgcgcctggttccggttgtcggccctggccgagcgcgtc
gacgcgacccgccgggtcgccgccgagcgcagccgctatctgagcgaagccgccaccgag
gcgaccggacccgacccggaggaactcgaggagcaggccctggaggccgccgaactcgag
gccgaactgaccgagggcgtcgagatcgccgccgaacaactcgagacggcccgcgaggtg
ctccgcgagcgcgagtcgatcgccgaggccgcggaggccgcccatctcgccgccgtccag
gcgatcgccgaccgtcgggaaggactggcccgtctcgagggacaggtcgacaacctgcga
acgcgttccgagggggtcgacgccgaggccgaccgtctgacggctgccatcgcccacgcc
accgaacgcgccgaaagcgctgccatgcaacaggattcggcagcgggggaactcgcgcag
ctggaggcgtccgagcaggccctcgacgagcaccacgagcggtgcgtcaccgcgctgaac
ctgtccaacgaacgtgtcgcgaccctgcaggcgcagcaccgcgaggccgaacagtccatc
gcctcgctgtcggcgcgggtcgaggccctcgccatgggcctggaacgcaacgacggcggc
gcctggctgctcgacaacgcgcccgacggcctgctcggaccgatgtcggagctggtcacc
gtcgaacccggcttcgagaccgcgatcgccggtgcgctcggcccggcggtcgacggcatc
gtgacggtcgacggcatggcggccatccgcgcgctcgaggccctcaagtccggcgacggg
ggacgggccgccctgatctgcggcggcctcaccgactccgtacggcaacgagacgctgcc
ttgcccgaaggcgctcgctgggcatcctccgcggtgacctgtggtccggagatccgcacc
gcgatcgacaccgtcctcgccgacaccgtcgtagtcgacgaccccgcccggggcctggaa
ctggcccgcagcctcggcgtgcgcgtggtgacccacgccggtgaccgcatcggtcccgcc
tcgatcgagggtggatcgtcgcggcgtccgtcgacgctcgaggtgcagtccgccatcgac
gccgcgaccgaggacctggccgcgacccgacggcgcgtcgaagagctggaggccgcactc
gacggggcactcaccgaacagcgggaacgtcgggaagcggccgaggaggcactcgccgcg
ctccacgaatcggattccagtgtcggcgccgcgtatgagcagatggcccggctgggccac
gagatccgcaccgcccgggcggaggccgatcgcttcacccgtcagcgcaacctgctggag
aagggtcgcgccgagaccctggagtcccttcgcgaactggaggaacggctgcggctggcc
cgcgacgagtcggactcgggtccggagatggccgccgacgactccgagcggtcgaccgcc
gcggcggccgtcgggatcgcccgcggtaccgagatggaggcgcgtctggcactgcgcacc
gccgaggaacgcctctcgtcggtgcgcggcaaggccgactcgctgcggcgcgccgcccag
cgtgagcgggaggcccgcgagcgggcacgtcgtcaggacgagatccggcgacaggccgcc
ggggtggcggtggccgtcgagcgggccggcgcgcaggtcgccgagcgtctcgcggcggcg
gtcgcgtcggcgcaggcgggtcgcgacgagctcgaggagctccgggtcgcgcgctcggcg
accctcgacgagctgcgcctgaaatccggggaactgaccaccacgctgaactcgttgcgc
gacaccgtgcatcgtgacgaggtggcccgtgcccaggtggcgctgcggatcgaacagctc
gaggagcagattctcgagacgttcgcgatgtcgccggacgacctcatcgccgaatacggc
cccgacgtcccgatgccgccgtcggccctggagatgcaggagtacgaggaggcgaaggcg
cgcggtgaacaggtggtggccccggcacccatgccgtacgaccgcgccacccaggaagcc
cgggcgaagaaggcgcagaaagacctcaacacgctcggcaaggtcaacccgctcgcgctc
gaggagttcgccgcgctggaggagcgctacaacttcctgtcctcgcagctcgaggacgtc
aaggccgcacgcaaggacctgctcgacgtcgtcgaggacgtggacgcccgcatcctgcag
gtgttcaccgaggcctacgccgacgtcgagcgcgagttcggccaggtcttccagacgctg
ttccccggcggcgagggccggctcgtgctgaccgagcccaacgacatgctgaccaccggc
atcgaggtggaggcccggccgccgggtaagaaggtgaagagactgtcgctgctgtcgggc
ggggagaaatccctgaccgcggtcgcgatgctggtggcgatcttccgtgcccgcccgtca
ccgttctatgtcatggacgaggtcgaggcggcgctcgacgacaccaacctgcgtcgtctc
atcaagctgttcgagcagttgcgggagaagtcgcagctcatcgtcatcacccatcagaag
cccacgatggagatcgccgacgccctctacggcgtcagcatgcgcggggacggcatcacg
accgtcatctcgcagcgcatgcggggcgtcaacatgcccgtggctcaacaggaggacacc
agccagtga
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