Gordonia amicalis: IHQ52_18040
Help
Entry
IHQ52_18040 CDS
T08222
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
gami
Gordonia amicalis
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gami03400
]
IHQ52_18040
DNA repair and recombination proteins [BR:
gami03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
IHQ52_18040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
TrwB_AAD_bind
AAA_22
DUF5852
AAA_30
FtsK_SpoIIIE
ResIII
DEAD
AAA_16
CbiA
T2SSE
Zeta_toxin
AAA
AAA_6
AAA_18
AAA_19
AAA_7
SRP54
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UKO90896
LinkDB
All DBs
Position
complement(3933755..3935353)
Genome browser
AA seq
532 aa
AA seq
DB search
MSLVTEALSPAQTIAAGYAFTSTALELGTVSVDGQVDPTASVRIPLAMMNRHGLVAGATG
TGKTKTLQLLAEQLSANGVPVVMADIKGDLSGLSREGVSSDKIVERAQQTGDAWRPASHP
VEFVSLGSTGIGVPIRATITSFGPILLSKVLGLNDTQESTLGLIFHWADKKGLPLLDLKD
LRSVIAFLTGDEGKAELKNIGGVSRQTAGVILRALTNLEADGGDTFFGEPEVEPADLIRL
AADGRGIITLFELGAQAARPALFSTFLMWILADLFEFLPEVGDLDKPKLVFIFDESHLLF
DDASKAFDDQVVQTVKLIRSKGVGVFFCSQLPTDIPNEVLSQLGARIQHALRAFTPDDQK
ALRKTVKTYPVSEIYQLEQVLTSLGTGEAVVTVLSEKGAPTPVAWTVVRPPRSSMDAIGA
EAITAAATTSPLYAKYGQSIDRESAYEMLAANTLSPGESADAPAPVPVPSPAPAPKRAPA
PTQAPKPAPEEPDIITEVLTSKPVQSFLRSAASAAGREFSRAIFGTGRRRRR
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
gtgtccctcgtgaccgaagccctcagccctgctcagacgatcgccgccggctacgccttc
acctcgaccgcgctcgaactggggacggtgtcggtggacggtcaggtcgatcccaccgcc
tcggtccgcatcccgctcgcgatgatgaaccggcacggcctggtcgccggggccacgggt
accggcaagacgaaaacgctgcagttgctggccgaacagctctccgccaacggggtgccc
gtggtgatggccgacatcaagggcgacctgtcgggactgagtcgcgagggcgtcagcagc
gacaagatcgtcgaacgcgcacagcagaccggcgatgcctggcggccggcctcccatccg
gtggaattcgtctcgctcgggtccaccggcatcggtgtgcccatccgggcgacgatcacg
tcgttcggtccgatcctgctctcgaaggtgttgggactcaacgacacccaggagtccact
ctcgggctcatcttccattgggcggacaagaagggcctgccgctgctcgacctgaaggat
ctgcggtcggtcatcgccttcctcaccggcgacgagggcaaggcggagctgaagaacatc
ggcggggtctcccgccagaccgcgggcgtgatcctgcgtgcgctcaccaatctcgaggcc
gacggcggcgacaccttcttcggtgagcccgaggtggaacccgccgacctgatccggctc
gcggccgacggccgcggcatcatcacgcttttcgaactcggtgcgcaggccgcccgtccg
gcgctcttctcgacgtttctcatgtggattctggccgacctcttcgagttcctgccggag
gtcggcgacctcgacaagccgaagctggtcttcatcttcgacgagtcgcatctgctgttc
gacgacgcgtccaaggcgttcgacgaccaggtcgtgcagacggtgaagctgatccgttcg
aagggcgtgggcgtgttcttctgctctcagctgcccaccgacatccccaacgaggtgctc
tcgcagctcggcgcccgtatccagcatgcgttgcgcgccttcacccctgacgatcagaag
gcgctgaggaagacggtcaagacctatccggtgtcggagatctaccagctcgagcaggtc
ctcacgtcgctgggtacgggcgaggccgtggtgacggtgttgtcggagaagggtgcgccg
acgccggtcgcgtggacggtggtgcgcccgccgcgttcgtcgatggatgccatcggggcg
gaggcgatcacggctgcggccacgacgagtccgttgtacgccaagtacgggcagtcgata
gatcgcgagtcggcctacgagatgctcgccgcgaacaccctgtcacccggggagtccgcc
gacgcgccggcccccgtgccggtaccgtcacccgcccctgcaccgaaacgggctccggca
ccgacacaggcaccgaagccggcacccgaggagccggacatcatcaccgaggtgctgacc
agcaagccggtccagagcttcctccgttcggcggccagtgccgcgggacgcgagttcagt
cgcgcgatcttcggtacgggtcgacgtcgccggcggtga
DBGET
integrated database retrieval system
