Gordonia amicalis: IHQ52_18045
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Entry
IHQ52_18045 CDS
T08222
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
gami
Gordonia amicalis
Pathway
gami03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
IHQ52_18045 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gami03019
]
IHQ52_18045 (orn)
03009 Ribosome biogenesis [BR:
gami03009
]
IHQ52_18045 (orn)
Messenger RNA biogenesis [BR:
gami03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IHQ52_18045 (orn)
Ribosome biogenesis [BR:
gami03009
]
Eukaryotic type
Pre-60S particles
RNases
IHQ52_18045 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UKO90897
LinkDB
All DBs
Position
3935424..3936023
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AA seq
199 aa
AA seq
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MQDKLVWIDCEMTGLRLESDKLIEIAALVTDGDLNILGDGVDVVIHADDEALASMPDVVT
KMHADSGLTDEVRKSTVTLAEAEKMVLDYIRKHVTTPGAVPLAGNSIATDRGFIARDMPE
LDAYLHYRMVDVSSIKELCRRWYPRVYFGQPEKGLAHRALADIRESIRELRYYRAAAFVP
TPGPDVDALANIVKDLGPT
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggacaaactggtgtggatagattgcgagatgaccggcctccgactcgaatcggac
aagctgatcgagatcgcggccctggtcaccgacggtgacctcaacatcctgggtgacggc
gtcgacgtcgtcatccacgccgacgacgaggctctcgcgtcgatgcccgacgtcgtgacc
aagatgcatgcggactccggcctcaccgacgaggtacgcaagtccaccgtcactctcgcc
gaggccgagaagatggtcctcgactacatccgcaaacacgtgacgacgcccggagccgtc
ccgctggccggcaactcgatcgccaccgaccgcggtttcatcgcccgcgacatgcccgaa
ctcgacgcctacctgcactatcggatggtcgacgtcagttccatcaaggaactgtgccgc
cgctggtacccgcgcgtgtacttcggccagcccgagaagggcctcgcccaccgcgcactc
gccgacatccgcgagtcgatccgcgagctccgttactaccgcgcggcggcgttcgtgccg
acgcccggccccgacgtcgacgcgttggcgaacatcgtcaaggacctcgggcccacctga
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