Gordonia amicalis: IHQ52_18380
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Entry
IHQ52_18380 CDS
T08222
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
gami
Gordonia amicalis
Pathway
gami00470
D-Amino acid metabolism
gami00550
Peptidoglycan biosynthesis
gami01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IHQ52_18380 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IHQ52_18380 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gami01011
]
IHQ52_18380 (murD)
Enzymes [BR:
gami01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
IHQ52_18380 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
gami01011
]
Precursor biosynthesis
Amino acid ligase
IHQ52_18380 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
Thi4
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
UKO90955
LinkDB
All DBs
Position
complement(4011988..4013583)
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AA seq
531 aa
AA seq
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MADPLTAENPTPGSDPLGLTGRTVVVGGAGTAGMSAARYLVTRDVHIVLADDRFASRNAE
TAAREAAVRAVAGVADLLSQGAEAVAIADLLADPSWTADAAVVIVSPGFAPTHDLVGQAA
AGGVPVWGEVELAWRVDAAGLLGEPRTWLVVTGTNGKTTTTSMLADIVERSGRAGAACGN
IGLPVLDAMRATPRVDVLCAELSSFQLHWAPSVRPAAGVVLNVAEDHLDWHGTFDAYAIA
KAGALRGDIAVVGLDDPVASGLPGAGRRVGFTLGAPQDGQLGVEDGHLVDRAFGAGRLLP
ADAVHPAGPSGVSDALAASALALAIGVGRDAVEAALTDFRPAAHRGEVVATRDGVLFVDD
SKATNPHAAQAAVAAYDRVVLIAGGLLKGASMDGMLTAVGDRLAGVVAIGRDRDLVVEAI
VRHAPEVPTVTVFTGDDGTVNVHRQGQTEPVLSSTPFSSSAEASESDSAVAVMDRAVAEA
WELAAASDPTPDAVLLAPAAASLDMFAGYGRRGDAFAHAARDIAGTSSSSR
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggctgatccgctcaccgccgagaaccccacgccgggcagcgacccgctggggctgacc
ggccggaccgtggtggtcggcggggcgggtaccgccggcatgtccgcggcccggtacctg
gtgacccgcgacgtccacatcgtgctcgccgacgaccggttcgcctcgcggaacgccgag
accgccgcccgggaagcggccgtgcgtgcggtggcgggggtcgcggatctgctctcgcag
ggtgcggaggcggtcgcgatcgccgatctgctcgcggacccgtcgtggaccgctgacgcc
gcggtcgtgatcgtgtcaccggggttcgcacccacgcacgacctcgtcggtcaggccgcg
gcgggcggcgtaccggtgtggggtgaggtcgaactggcctggcgtgtcgacgccgcggga
ctgctcggcgagccgcgcacctggctggtcgtcaccggcaccaacggaaagaccacgacc
acctcgatgctcgccgacatcgtcgagcgttccggccgcgccggcgcggcatgcggcaac
atcggcctgccggtcctcgacgccatgcgggcgacgccccgcgtcgacgtgctgtgcgcc
gagttgtcgtcgttccagctgcactgggcgccgtcggtccgcccggccgcgggggtggtg
ctcaacgtcgccgaggaccacctcgactggcacggcaccttcgacgcctacgcgatcgcc
aaggccggcgcgctgcgcggcgacatcgcggtcgtgggtctcgacgacccggtcgcgtcg
ggcctgccgggcgcgggacgccgtgtcggcttcactctcggcgcgccgcaggacggtcag
ctgggggtcgaggacggccatctcgtcgaccgtgccttcggtgccggtcgcctgctgccc
gccgacgccgtgcatccggccggtccatcaggtgtgtccgatgccctcgccgcctccgca
ctcgccctcgcgatcggtgtcgggcgcgacgccgtcgaggcggcgctgaccgacttccgg
ccggccgcccaccgcggcgaggtggtggcgacccgcgacggcgtcctcttcgtcgacgac
tcgaaggccaccaacccccatgccgcccaggcggcggtcgccgcctacgaccgcgtggtg
ctgatcgccggcggcctgctcaagggtgcgtcgatggacgggatgctcaccgcggtcggc
gatcggctcgccggggtggtcgccatcgggcgggatcgtgacctggtcgtcgaagcgatc
gtgcgacacgccccagaagtcccaacagtcacagtattcacaggggacgatggcacggtg
aacgtgcatcgccagggtcagaccgaacccgtcctctcgtcgacaccattctcgtcgtcg
gcagaagcctcggagtcagacagcgccgtcgccgtgatggaccgggcggtcgccgaggca
tgggagctcgccgcagcgagtgacccgacgcccgacgcggtgctcctcgcacccgccgcg
gcctcgctggacatgttcgccggttacggccggcgcggtgacgcgttcgcgcacgccgcc
cgggacatcgccggcacctcctcgtcctcgcggtga
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